Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-416j23.1

Gene Name Gene ID Reads Annotation
si:ch1073-416j23.1 ENSDARG00000055934 4 si:ch1073-416j23.1 [Source:ZFIN;Acc:ZDB-GENE-100922-35]










Genes with expression patterns similar to si:ch1073-416j23.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-416j23.1 ENSDARG00000055934 4 3 1.000 - - 1.000 - - - - 1.000 si:ch1073-416j23.1 [Source:ZFIN;Acc:ZDB-GENE-100922-35]
2. GMNC ENSDARG00000068719 28 1.486 - - - 0.745 - - - - 0.741 geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
3. ZC3H8 ZC3H8 114 1.449 0.734 - - - - - - - 0.715
4. CABZ01112732.1 ENSDARG00000068453 4 1 1.000 - - - - - - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
5. CDH18 ENSDARG00000102769 4 1 1.000 - - - - - - - - cadherin 18 [Source:HGNC Symbol;Acc:HGNC:1757]
6. capn3a ENSDARG00000041864 89 1 1.000 - - - - - - - - calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97]
7. CR478286.1 CR478286.1 3 1 1.000 - - - - - - - -
8. lcp2a ENSDARG00000055955 23 1 1.000 - - - - - - - - lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
9. THSD7B THSD7B 15 1 1.000 - - - - - - - -
10. irf1b ENSDARG00000043249 30 1 1.000 - - - - - - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
11. si:dkey-148b12.4 si:dkey-148b12.4 2 1 1.000 - - - - - - - -
12. si:dkey-19n13.5 si:dkey-19n13.5 36 1 1.000 - - - - - - - -
13. rag1 ENSDARG00000052122 13 1 1.000 - - - - - - - - recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
14. ATG4D_1 ATG4D_1 1 1 1.000 - - - - - - - -
15. si:dkey-151g22.1 ENSDARG00000098452 1 1 1.000 - - - - - - - - si:dkey-151g22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-115]
16. klc1a ENSDARG00000009796 10 1 1.000 - - - - - - - - kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599]
17. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 1 1.000 - - - - - - - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
18. SLC4A8 ENSDARG00000015531 16 1 1.000 - - - - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
19. FP245525.1 FP245525.1 3 1 1.000 - - - - - - - -
20. SLC39A14 ENSDARG00000102387 4 1 - - - - - - - - 1.000 solute carrier family 39 (zinc transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-060315-2]
21. si:dkey-57c22.1 ENSDARG00000093846 12 1 1.000 - - - - - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
22. cyp46a2 cyp46a2 38 1 1.000 - - - - - - - -
23. zgc:136930 ENSDARG00000055192 1208 1 1.000 - - - - - - - - zgc:136930 [Source:ZFIN;Acc:ZDB-GENE-060312-16]
24. ZNF70_14 ZNF70_14 19 1 1.000 - - - - - - - -
25. il34 ENSDARG00000091003 14 1 1.000 - - - - - - - - interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150]
26. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 - - - - - - - - 1.000 si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
27. CABZ01054405.2 CABZ01054405.2 46 1 1.000 - - - - - - - -
28. ENSDARG00000089996 ENSDARG00000089996 17 1 1.000 - - - - - - - -
29. CR388163.1 ENSDARG00000096928 5 1 1.000 - - - - - - - -
30. CR848814.2 CR848814.2 19 1 1.000 - - - - - - - -
31. BX000348.1 BX000348.1 2 1 1.000 - - - - - - - -
32. CU302436.1_1 ENSDARG00000114500 18 1 1.000 - - - - - - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
33. ccdc33 ENSDARG00000051858 11 1 1.000 - - - - - - - - coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1]
34. GAS2 18 1 1.000 - - - - - - - - growth arrest specific 2, transcript variant X1
35. U2_5 U2_5 5 1 1.000 - - - - - - - -
36. fut11 ENSDARG00000102402 56 1 1.000 - - - - - - - - fucosyltransferase 11 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-728]
37. fgf3 ENSDARG00000101540 75 1 1.000 - - - - - - - - fibroblast growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-178]
38. mylka ENSDARG00000034801 133 1 1.000 - - - - - - - - myosin, light chain kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8207]
39. CHST15 ENSDARG00000074527 210 1 1.000 - - - - - - - - carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [Source:ZFIN;Acc:ZDB-GENE-131127-327]
40. SNORD52 SNORD52 23 1 1.000 - - - - - - - -
41. ZBED1_1 ZBED1_1 3 1 1.000 - - - - - - - -
42. si:zfos-2548d7.1 si:zfos-2548d7.1 3 1 1.000 - - - - - - - -
43. mapre3a ENSDARG00000020231 100 1 1.000 - - - - - - - - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
44. si:ch211-11i5.3 si:ch211-11i5.3 7 1 1.000 - - - - - - - -
45. GANC ENSDARG00000074556 36 1 1.000 - - - - - - - - glucosidase, alpha; neutral C [Source:ZFIN;Acc:ZDB-GENE-130530-754]
46. BX324198.1 BX324198.1 12 1 1.000 - - - - - - - -
47. atad1b ENSDARG00000056609 40 1 1.000 - - - - - - - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
48. ENKD1 ENSDARG00000043550 44 1 1.000 - - - - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
49. map3k4 ENSDARG00000104835 34 1 1.000 - - - - - - - - mitogen-activated protein kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-990603-4]
50. BX649391.1 BX649391.1 2 1 1.000 - - - - - - - -
51. slc4a4b ENSDARG00000044808 9 1 1.000 - - - - - - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
52. KEL ENSDARG00000076950 159 1 1.000 - - - - - - - - Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118]
53. ZBED1_3 ZBED1_3 7 1 1.000 - - - - - - - -
54. cdh10 cdh10 38 1 1.000 - - - - - - - -
55. si:dkey-63d15.12 ENSDARG00000075480 9 1 1.000 - - - - - - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
56. si:ch211-76l23.4 ENSDARG00000096242 202 1 1.000 - - - - - - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
57. FCHSD2_1 FCHSD2_1 14 1 1.000 - - - - - - - -
58. BX005006.2 BX005006.2 1 1 1.000 - - - - - - - -
59. CABZ01088930.1 CABZ01088930.1 20 1 1.000 - - - - - - - -
60. gbgt1l3 ENSDARG00000035555, ENSDARG00000091969 91 1 1.000 - - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-040912-46]
61. si:ch73-119o17.1 si:ch73-119o17.1 6 1 1.000 - - - - - - - -
62. ccrl1b ccrl1b 154 1 1.000 - - - - - - - -
63. SNORD59 SNORD59 7 1 1.000 - - - - - - - -
64. TRMT12 ENSDARG00000060338 58 1 1.000 - - - - - - - - tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
65. si:ch211-74m13.3 ENSDARG00000076144 55 1 1.000 - - - - - - - - si:ch211-74m13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-219]
66. gja3 ENSDARG00000021889, ENSDARG00000116798 49 1 1.000 - - - - - - - - gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
67. slc25a23b ENSDARG00000024708 51 1 1.000 - - - - - - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23b [Source:ZFIN;Acc:ZDB-GENE-040724-220]
68. si:dkey-53f14.2 si:dkey-53f14.2 4 1 1.000 - - - - - - - -
69. sumf2 ENSDARG00000069497 51 1 1.000 - - - - - - - - sulfatase modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-55]
70. ptger1c ENSDARG00000078602, ENSDARG00000110042 2 1 1.000 - - - - - - - - prostaglandin E receptor 1c (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120917-4]
71. fpgt ENSDARG00000042139 155 1 1.000 - - - - - - - - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
72. XKR8 XKR8 9 1 1.000 - - - - - - - -
73. foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 1 1.000 - - - - - - - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
74. radil ENSDARG00000079779 14 1 1.000 - - - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
75. si:ch211-232d10.3 ENSDARG00000104008 2 1 1.000 - - - - - - - - si:ch211-232d10.3 [Source:ZFIN;Acc:ZDB-GENE-081103-4]
76. purg ENSDARG00000099187, ENSDARG00000114450 33 0.984 0.984 - - - - - - - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
77. si:ch73-381a20.2 si:ch73-381a20.2 11 0.984 0.984 - - - - - - - -
78. si:ch211-255f4.8 ENSDARG00000103571 91 0.98 0.980 - - - - - - - - si:ch211-255f4.8 [Source:ZFIN;Acc:ZDB-GENE-050208-709]
79. LYPLAL1 ENSDARG00000088764 87 0.978 0.978 - - - - - - - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
80. bend5 ENSDARG00000075624 10 0.969 - - - - - - - - 0.969 BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
81. gnat1 ENSDARG00000044199 251 0.967 - - - - - - - - 0.967 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011128-11]
82. DNAI1 DNAI1 11 0.96 0.960 - - - - - - - -
83. CABZ01039301.1 CABZ01039301.1 189 0.942 0.942 - - - - - - - -
84. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 0.939 0.939 - - - - - - - - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
85. RNF14 ENSDARG00000043905 41 0.939 - - - - - - - - 0.939 ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
86. CU457778.1 ENSDARG00000098976 38 0.938 0.938 - - - - - - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
87. PEG3_41 PEG3_41 124 0.938 0.938 - - - - - - - -
88. si:dkey-102m7.3 ENSDARG00000100366 27 0.938 0.938 - - - - - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
89. rps8b ENSDARG00000057368 68 0.933 0.933 - - - - - - - - ribosomal protein S8b [Source:ZFIN;Acc:ZDB-GENE-050522-202]
90. pear1 ENSDARG00000060753 173 0.931 0.931 - - - - - - - - platelet endothelial aggregation receptor 1 [Source:ZFIN;Acc:ZDB-GENE-091230-1]
91. SNORA81 SNORA81 47 0.929 0.929 - - - - - - - -
92. KCNK3 KCNK3 115 0.928 0.928 - - - - - - - -
93. adh8a ENSDARG00000091211, ENSDARG00000113750 19 0.92 0.920 - - - - - - - - alcohol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-030529-3]
94. ctgfb ENSDARG00000104292 69 0.92 0.920 - - - - - - - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
95. CU467642.1 CU467642.1 8 0.92 0.920 - - - - - - - -
96. prkacbb ENSDARG00000059125 7 0.92 0.920 - - - - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
97. CU929230.1 ENSDARG00000030665 48 0.92 0.920 - - - - - - - - transcription elongation regulator 1b (CA150) [Source:NCBI gene;Acc:797473]
98. CU972452.1 CU972452.1 1046 0.915 0.915 - - - - - - - -
99. CU570983.1 CU570983.1 83 0.912 0.912 - - - - - - - -
100. slc6a5 ENSDARG00000067964, ENSDARG00000111378 34 0.912 0.912 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]

There are 231 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA