Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-403i13.1

Gene Name Gene ID Reads Annotation
si:ch1073-403i13.1 si:ch1073-403i13.1 1










Genes with expression patterns similar to si:ch1073-403i13.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-118j18.3 si:dkey-118j18.3 4 2 - - - - - 1.000 - 1.000 -
2. si:ch1073-403i13.1 si:ch1073-403i13.1 1 2 - - - - - 1.000 - 1.000 -
3. hes2.2 ENSDARG00000068168 197 1.566 - - - - - 0.859 - 0.707 - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
4. trim35-31 ENSDARG00000052097, ENSDARG00000111232 0 1 - - - - - - - 1.000 - tripartite motif containing 35-31 [Source:ZFIN;Acc:ZDB-GENE-061009-3]
5. fbxo43 ENSDARG00000104186 40 1 - - - - - 1.000 - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
6. apex2 ENSDARG00000008472 39 1 - - - - - 1.000 - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
7. BX005421.3 ENSDARG00000114309 7 1 - - - - - 1.000 - - -
8. si:ch211-226h7.4 si:ch211-226h7.4 0 1 - - - - - 1.000 - - -
9. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - - - 1.000 - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
10. CABZ01035647.1 CABZ01035647.1 5 1 - - - - - 1.000 - - -
11. col5a2b ENSDARG00000024847 17 1 - - - - - 1.000 - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
12. CABZ01113978.1 CABZ01113978.1 1 1 - - - - - 1.000 - - -
13. si:ch211-22k7.8 si:ch211-22k7.8 0 1 - - - - - 1.000 - - -
14. TRIM14_11 TRIM14_11 2 1 - - - - - 1.000 - - -
15. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 - - - - - 1.000 - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
16. U1_54 U1_54 0 1 - - - - - 1.000 - - -
17. AL929092.3 AL929092.3 0 1 - - - - - - - 1.000 -
18. TMC2 TMC2 5 1 - - - - - 1.000 - - -
19. si:ch211-202n12.5 si:ch211-202n12.5 19 1 - - - - - - - 1.000 -
20. ngb ENSDARG00000053475, ENSDARG00000116651 33 1 - - - - - 1.000 - - - neuroglobin [Source:ZFIN;Acc:ZDB-GENE-011102-1]
21. PPFIBP1 PPFIBP1 46 1 - - - - - 1.000 - - -
22. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - - - - - 1.000 - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
23. GGA3 ENSDARG00000103667 0 1 - - - - - - - 1.000 - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
24. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - - - - 1.000 - - -
25. zgc:110045 ENSDARG00000057141, ENSDARG00000110961 4 1 - - - - - - - 1.000 - zgc:110045 [Source:ZFIN;Acc:ZDB-GENE-050706-149]
26. si:ch211-207o17.8 si:ch211-207o17.8 1 1 - - - - - 1.000 - - -
27. zgc:174698_1 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 1 1 - - - - - - - 1.000 - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
28. CR847844.3 CR847844.3 1 1 - - - - - 1.000 - - -
29. kitb ENSDARG00000056133, ENSDARG00000113747 10 1 - - - - - - - 1.000 - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
30. kcnq2a ENSDARG00000075307 7 1 - - - - - 1.000 - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
31. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - - 1.000 - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
32. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
33. zgc:136902 zgc:136902 4 1 - - - - - 1.000 - - -
34. esyt1b ENSDARG00000014239 8 1 - - - - - 1.000 - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
35. si:dkey-29f21.5 si:dkey-29f21.5 3 1 - - - - - 1.000 - - -
36. CABZ01015787.1 CABZ01015787.1 6 1 - - - - - - - 1.000 -
37. ENSDARG00000086666 ENSDARG00000086666 2159 1 - - - - - 1.000 - - -
38. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - 1.000 - - - si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
39. ENSDARG00000091642 ENSDARG00000091642 14 1 - - - - - 1.000 - - -
40. SNTB2 ENSDARG00000051763 2 1 - - - - - 1.000 - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
41. CR854899.1 ENSDARG00000102357 8 1 - - - - - 1.000 - - -
42. heatr1 ENSDARG00000099742 92 1 - - - - - 1.000 - - - HEAT repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6378]
43. ifnlr1 ENSDARG00000087131 73 1 - - - - - 1.000 - - - interferon lambda receptor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-5]
44. tpgs2 ENSDARG00000011926 48 1 - - - - - 1.000 - - - tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
45. RASSF8 RASSF8 0 1 - - - - - - - 1.000 -
46. fbn1 39 1 - - - - - 1.000 - - - fibrillin 1
47. FNDC3A ENSDARG00000105503 11 1 - - - - - - - 1.000 - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
48. CR318660.3 CR318660.3 0 1 - - - - - 1.000 - - -
49. ungb ENSDARG00000094922 16 1 - - - - - 1.000 - - - uracil DNA glycosylase b [Source:ZFIN;Acc:ZDB-GENE-070705-360]
50. si:ch211-218c6.9 si:ch211-218c6.9 40 1 - - - - - 1.000 - - -
51. si:dkey-164n2.1 47 1 - - - - - - - 1.000 - si:dkey-164n2.1, transcript variant X1
52. si:dkey-201i6.5 si:dkey-201i6.5 3 1 - - - - - - - 1.000 -
53. zgc:113295 ENSDARG00000074768, ENSDARG00000103947 36 1 - - - - - - - 1.000 - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
54. ENSDARG00000086339 ENSDARG00000086339 1 1 - - - - - - - 1.000 -
55. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 1 - - - - - 1.000 - - - doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
56. si:ch211-132b12.2 ENSDARG00000094946 15 1 - - - - - 1.000 - - - si:ch211-132b12.2 [Source:ZFIN;Acc:ZDB-GENE-050420-178]
57. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 1 - - - - - - - 1.000 - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
58. si:dkey-250k15.4 ENSDARG00000092169 19 1 - - - - - 1.000 - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
59. ca14 ENSDARG00000061697 1 1 - - - - - - - 1.000 - carbonic anhydrase XIV [Source:ZFIN;Acc:ZDB-GENE-051030-57]
60. EGFR_1 EGFR_1 2 1 - - - - - 1.000 - - -
61. zgc:153921 ENSDARG00000020738, ENSDARG00000038405 34 1 - - - - - 1.000 - - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
62. ENSDARG00000091382 ENSDARG00000091382 4 1 - - - - - - - 1.000 -
63. si:ch73-381a20.2 si:ch73-381a20.2 11 1 - - - - - 1.000 - - -
64. hs6st1a ENSDARG00000054754 1 1 - - - - - - - 1.000 - heparan sulfate 6-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050524-1]
65. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - - 1.000 - - -
66. FBXL19 FBXL19 8 1 - - - - - - - 1.000 -
67. CAMSAP2 CAMSAP2 109 1 - - - - - 1.000 - - -
68. AHNAK2 AHNAK2 33 1 - - - - - 1.000 - - -
69. si:ch211-145g9.7 32 1 - - - - - - - 1.000 - si:ch211-145g9.7, transcript variant X1
70. aven ENSDARG00000002894 49 1 - - - - - 1.000 - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
71. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - 1.000 - solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
72. pth1b ENSDARG00000091961, ENSDARG00000115353 5 1 - - - - - 1.000 - - - parathyroid hormone 1b [Source:ZFIN;Acc:ZDB-GENE-040623-2]
73. si:ch211-113a14.15_1 2 1 - - - - - 1.000 - - - si:ch211-113a14.15
74. si:ch73-191k20.4 37 1 - - - - - 1.000 - - - si:ch73-191k20.4, transcript variant X1
75. ptpn20 ENSDARG00000075459 1 1 - - - - - 1.000 - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
76. CABZ01079804.1 ENSDARG00000117619 1 1 - - - - - 1.000 - - -
77. COL26A1 COL26A1 9 1 - - - - - - - 1.000 -
78. hp ENSDARG00000051890, ENSDARG00000095807 4 1 - - - - - 1.000 - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
79. wu:fa26c03 18714 1 - - - - - 1.000 - - - wu:fa26c03
80. si:dkey-233e3.6 si:dkey-233e3.6 1 1 - - - - - - - 1.000 -
81. si:ch211-145h19.1 31 1 - - - - - 1.000 - - - si:ch211-145h19.1
82. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - - 1.000 -
83. CREM_1 CREM_1 9 1 - - - - - 1.000 - - -
84. dnmt3aa ENSDARG00000005394 63 1 - - - - - 1.000 - - - DNA (cytosine-5-)-methyltransferase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-050314-5]
85. lmbrd2a ENSDARG00000099566 15 1 - - - - - 1.000 - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
86. si:ch73-111e15.1 ENSDARG00000008182 2 1 - - - - - 1.000 - - - si:ch73-111e15.1 [Source:ZFIN;Acc:ZDB-GENE-110411-28]
87. HTR7 17 1 - - - - - 1.000 - - - 5-hydroxytryptamine receptor 7
88. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - 1.000 - - - contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
89. ENDOD1_4 ENDOD1_4 2 1 - - - - - 1.000 - - -
90. ZNF337 ZNF337 3 1 - - - - - 1.000 - - -
91. hbaa2 ENSDARG00000069735 10 1 - - - - - 1.000 - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
92. AL928685.1 ENSDARG00000095786 0 1 - - - - - 1.000 - - -
93. arhgef19 ENSDARG00000078853 17 1 - - - - - 1.000 - - - Rho guanine nucleotide exchange factor (GEF) 19 [Source:ZFIN;Acc:ZDB-GENE-090313-243]
94. zgc:195633_1 142 1 - - - - - 1.000 - - - zgc:195633
95. pde6g 8 1 - - - - - - - 1.000 - phosphodiesterase 6G, cGMP-specific, rod, gamma
96. BX569793.1 ENSDARG00000096832 0 1 - - - - - 1.000 - - -
97. si:ch211-198c19.1 ENSDARG00000089333 3 1 - - - - - 1.000 - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
98. vcpip1 ENSDARG00000060177 56 1 - - - - - 1.000 - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
99. si:dkey-117n7.4 ENSDARG00000092064 22 1 - - - - - 1.000 - - - si:dkey-117n7.4 [Source:ZFIN;Acc:ZDB-GENE-060503-237]
100. si:dkey-161j23.6 ENSDARG00000092347 0 1 - - - - - 1.000 - - - si:dkey-161j23.6 [Source:ZFIN;Acc:ZDB-GENE-091204-173]

There are 201 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA