Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-403i13.1

Gene Name Gene ID Reads Annotation
si:ch1073-403i13.1 si:ch1073-403i13.1 1










Genes with expression patterns similar to si:ch1073-403i13.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-403i13.1 si:ch1073-403i13.1 1 2 - - - - - 1.000 - 1.000 -
2. si:dkey-118j18.3 si:dkey-118j18.3 4 2 - - - - - 1.000 - 1.000 -
3. hes2.2 ENSDARG00000068168 197 1.566 - - - - - 0.859 - 0.707 - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
4. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 1 - - - - - - - 1.000 - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
5. BICD2_1 BICD2_1 18 1 - - - - - - - 1.000 -
6. si:ch211-226h7.4 si:ch211-226h7.4 0 1 - - - - - 1.000 - - -
7. BX927308.3 BX927308.3 126 1 - - - - - - - 1.000 -
8. DTWD2 ENSDARG00000101873 1 1 - - - - - - - 1.000 - DTW domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120215-183]
9. ASCC3 ENSDARG00000086678 1 1 - - - - - - - 1.000 - activating signal cointegrator 1 complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-130214-2]
10. mcf2b ENSDARG00000056603, ENSDARG00000097371 1 1 - - - - - - - 1.000 - MCF.2 cell line derived transforming sequence b [Source:ZFIN;Acc:ZDB-GENE-091118-4]
11. NLRC5 ENSDARG00000024631 11 1 - - - - - - - 1.000 - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
12. BX294653.4 BX294653.4 1 1 - - - - - 1.000 - - -
13. U1_54 U1_54 0 1 - - - - - 1.000 - - -
14. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 1 - - - - - 1.000 - - - doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
15. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - - - 1.000 - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
16. si:ch211-225h9.2 si:ch211-225h9.2 16 1 - - - - - 1.000 - - -
17. atp8b5a ENSDARG00000062040 1 1 - - - - - 1.000 - - - ATPase phospholipid transporting 8B5a [Source:ZFIN;Acc:ZDB-GENE-060531-48]
18. slc4a4b ENSDARG00000044808 9 1 - - - - - 1.000 - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
19. si:ch73-381a20.2 si:ch73-381a20.2 11 1 - - - - - 1.000 - - -
20. NPM2 NPM2 41 1 - - - - - 1.000 - - -
21. CABZ01077140.1 CABZ01077140.1 2 1 - - - - - - - 1.000 -
22. tmem244 ENSDARG00000043847 3 1 - - - - - - - 1.000 - transmembrane protein 244 [Source:ZFIN;Acc:ZDB-GENE-040724-54]
23. si:dkey-117n7.4 ENSDARG00000092064 22 1 - - - - - 1.000 - - - si:dkey-117n7.4 [Source:ZFIN;Acc:ZDB-GENE-060503-237]
24. phc3 ENSDARG00000074604 2 1 - - - - - - - 1.000 - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
25. si:dkey-26h11.2 ENSDARG00000096458 10 1 - - - - - 1.000 - - - si:dkey-26h11.2 [Source:ZFIN;Acc:ZDB-GENE-120709-94]
26. carm1l ENSDARG00000091531 13 1 - - - - - 1.000 - - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
27. si:ch211-132b12.2 ENSDARG00000094946 15 1 - - - - - 1.000 - - - si:ch211-132b12.2 [Source:ZFIN;Acc:ZDB-GENE-050420-178]
28. GGA3 ENSDARG00000103667 0 1 - - - - - - - 1.000 - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
29. si:ch211-173m16.2 ENSDARG00000093284 186 1 - - - - - 1.000 - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
30. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 1 - - - - - 1.000 - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
31. zgc:153921 ENSDARG00000020738, ENSDARG00000038405 34 1 - - - - - 1.000 - - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
32. si:ch211-223g7.7 si:ch211-223g7.7 1 1 - - - - - 1.000 - - -
33. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - 1.000 - - - si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
34. hp ENSDARG00000051890, ENSDARG00000095807 4 1 - - - - - 1.000 - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
35. tlr1 ENSDARG00000100649 2 1 - - - - - 1.000 - - - toll-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040220-1]
36. ENSDARG00000091642 ENSDARG00000091642 14 1 - - - - - 1.000 - - -
37. CAMSAP2 CAMSAP2 109 1 - - - - - 1.000 - - -
38. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - - 1.000 - - -
39. si:ch211-196h16.12 ENSDARG00000028276 3 1 - - - - - - - 1.000 - si:ch211-196h16.12 [Source:ZFIN;Acc:ZDB-GENE-121214-351]
40. tpgs2 ENSDARG00000011926 48 1 - - - - - 1.000 - - - tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
41. nt5dc1 ENSDARG00000006797 3 1 - - - - - - - 1.000 - 5'-nucleotidase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8274]
42. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - - 1.000 -
43. CABZ01035647.1 CABZ01035647.1 5 1 - - - - - 1.000 - - -
44. kitb ENSDARG00000056133, ENSDARG00000113747 10 1 - - - - - - - 1.000 - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
45. si:dkey-43b14.6 si:dkey-43b14.6 20 1 - - - - - 1.000 - - -
46. U5_3 U5_3 3 1 - - - - - - - 1.000 -
47. FNDC3A ENSDARG00000105503 11 1 - - - - - - - 1.000 - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
48. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
49. si:ch211-207o17.8 si:ch211-207o17.8 1 1 - - - - - 1.000 - - -
50. CR450840.2 CR450840.2 1 1 - - - - - - - 1.000 -
51. col5a2b ENSDARG00000024847 17 1 - - - - - 1.000 - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
52. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - 1.000 - - - si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
53. apex2 ENSDARG00000008472 39 1 - - - - - 1.000 - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
54. FBXL19 FBXL19 8 1 - - - - - - - 1.000 -
55. ungb ENSDARG00000094922 16 1 - - - - - 1.000 - - - uracil DNA glycosylase b [Source:ZFIN;Acc:ZDB-GENE-070705-360]
56. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - - - - - 1.000 - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
57. CR847844.3 CR847844.3 1 1 - - - - - 1.000 - - -
58. si:dkey-201i6.5 si:dkey-201i6.5 3 1 - - - - - - - 1.000 -
59. si:ch211-113a14.15_1 2 1 - - - - - 1.000 - - - si:ch211-113a14.15
60. si:dkeyp-52c3.1 3 1 - - - - - - - 1.000 - si:dkeyp-52c3.1, transcript variant X1
61. si:ch211-218c6.9 si:ch211-218c6.9 40 1 - - - - - 1.000 - - -
62. si:ch211-202n12.5 si:ch211-202n12.5 19 1 - - - - - - - 1.000 -
63. CABZ01079804.1 ENSDARG00000117619 1 1 - - - - - 1.000 - - -
64. ftr64 ENSDARG00000101514 33 1 - - - - - - - 1.000 - finTRIM family, member 64 [Source:ZFIN;Acc:ZDB-GENE-090508-8]
65. RP1L1 RP1L1 15 1 - - - - - - - 1.000 -
66. COL26A1 COL26A1 9 1 - - - - - - - 1.000 -
67. lmbrd2a ENSDARG00000099566 15 1 - - - - - 1.000 - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
68. zeb1a ENSDARG00000016788 48 1 - - - - - 1.000 - - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
69. PPFIBP1 PPFIBP1 46 1 - - - - - 1.000 - - -
70. SYN3 0 1 - - - - - 1.000 - - - synapsin III
71. si:ch211-145h19.1 31 1 - - - - - 1.000 - - - si:ch211-145h19.1
72. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - 1.000 - solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
73. ei24 ENSDARG00000053840 78 1 - - - - - 1.000 - - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
74. si:dkey-164n2.1 47 1 - - - - - - - 1.000 - si:dkey-164n2.1, transcript variant X1
75. TRIM14_11 TRIM14_11 2 1 - - - - - 1.000 - - -
76. or125-4 ENSDARG00000095417 2 1 - - - - - 1.000 - - - odorant receptor, family E, subfamily 125, member 4 [Source:ZFIN;Acc:ZDB-GENE-070806-94]
77. si:dkey-32n7.8 ENSDARG00000090630 0 1 - - - - - 1.000 - - - si:dkey-32n7.8 [Source:ZFIN;Acc:ZDB-GENE-121214-326]
78. elavl2 ENSDARG00000040732 44 1 - - - - - 1.000 - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
79. EGR4_1 EGR4_1 14 1 - - - - - 1.000 - - -
80. zgc:110434 21 1 - - - - - 1.000 - - - zgc:110434
81. zgc:136902 zgc:136902 4 1 - - - - - 1.000 - - -
82. AHNAK2 AHNAK2 33 1 - - - - - 1.000 - - -
83. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 1 - - - - - 1.000 - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
84. cbx7b ENSDARG00000087181 5 1 - - - - - 1.000 - - - chromobox homolog 7b [Source:ZFIN;Acc:ZDB-GENE-110613-2]
85. ENSDARG00000089152 ENSDARG00000089152 12 1 - - - - - 1.000 - - -
86. BX571969.1 BX571969.1 8 1 - - - - - 1.000 - - -
87. ifnlr1 ENSDARG00000087131 73 1 - - - - - 1.000 - - - interferon lambda receptor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-5]
88. fbn1 39 1 - - - - - 1.000 - - - fibrillin 1
89. ngb ENSDARG00000053475, ENSDARG00000116651 33 1 - - - - - 1.000 - - - neuroglobin [Source:ZFIN;Acc:ZDB-GENE-011102-1]
90. zgc:162879 ENSDARG00000074163 6 1 - - - - - 1.000 - - - zgc:162879 [Source:ZFIN;Acc:ZDB-GENE-070424-92]
91. veph veph 3 1 - - - - - 1.000 - - -
92. si:dkey-27j5.5 ENSDARG00000026383 6 1 - - - - - - - 1.000 - si:dkey-27j5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-264]
93. CREM_1 CREM_1 9 1 - - - - - 1.000 - - -
94. wu:fa26c03 18714 1 - - - - - 1.000 - - - wu:fa26c03
95. RASSF8 RASSF8 0 1 - - - - - - - 1.000 -
96. aven ENSDARG00000002894 49 1 - - - - - 1.000 - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
97. CABZ01078520.1 CABZ01078520.1 2 1 - - - - - 1.000 - - -
98. TMC2 TMC2 5 1 - - - - - 1.000 - - -
99. ENSDARG00000086666 ENSDARG00000086666 2159 1 - - - - - 1.000 - - -
100. si:dkeyp-87d1.6 si:dkeyp-87d1.6 0 1 - - - - - 1.000 - - -

There are 201 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA