Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch1073-39g8.1

Gene Name Gene ID Reads Annotation
si:ch1073-39g8.1 si:ch1073-39g8.1 7










Genes with expression patterns similar to si:ch1073-39g8.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-39g8.1 si:ch1073-39g8.1 7 7 1.000 - 1.000 1.000 1.000 - 1.000 1.000 1.000
2. ZNF341 ENSDARG00000103725 6 2.547 - - - 1.000 - - - 0.778 0.769 zinc finger protein 341 [Source:ZFIN;Acc:ZDB-GENE-080204-99]
3. CR942805.3 CR942805.3 7 2 1.000 - - - - - - 1.000 -
4. 5S_rRNA_6 5S_rRNA_6 11 1.964 - - - 1.000 - - - 0.964 -
5. CU457819.2 ENSDARG00000105374 8 1.914 1.000 - 0.914 - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
6. mir124-1 10 1.908 1.000 - - - - - - - 0.908 microRNA 124-1
7. QDPR QDPR 11 1.844 1.000 - - - - - - - 0.844
8. si:dkey-89j23.3 si:dkey-89j23.3 9 1.813 1.000 - - - - - 0.813 - -
9. htr1b ENSDARG00000053987 11 1.813 1.000 - - - - - 0.813 - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
10. gfra2b ENSDARG00000044015 5 1.813 1.000 - - - - - 0.813 - - GDNF family receptor alpha 2b [Source:ZFIN;Acc:ZDB-GENE-091204-26]
11. scospondin ENSDARG00000067859 4 1.813 1.000 - - - - - 0.813 - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
12. frmd7 ENSDARG00000068958 1 1.813 - - - - - - 0.813 1.000 - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
13. iqsec3a ENSDARG00000099850, ENSDARG00000116182 12 1.813 1.000 - - - - - 0.813 - - IQ motif and Sec7 domain 3a [Source:ZFIN;Acc:ZDB-GENE-041210-343]
14. uts1 ENSDARG00000014927 35 1.813 1.000 - - - - - 0.813 - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
15. si:ch211-151h10.1 si:ch211-151h10.1 6 1.805 - - - 1.000 0.805 - - - -
16. si:ch211-64c10.1 si:ch211-64c10.1 21 1.769 - - - 1.000 0.769 - - - -
17. rhpn1 ENSDARG00000052454 3 1.736 1.000 - - 0.736 - - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
18. TRIM14_10 TRIM14_10 9 1.73 1.000 - 0.730 - - - - - -
19. exoc4 ENSDARG00000004336 32 1.725 1.000 - - - - - - - 0.725 exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
20. fkbp5 ENSDARG00000028396 20 1.715 1.000 - - - - - 0.715 - - FK506 binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-030616-630]
21. zgc:112234_6 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 4 1.709 - - 0.878 - - - - 0.831 - zgc:112234 [Source:NCBI gene;Acc:554097]
22. cx35b cx35b 63 1.706 0.925 - 0.781 - - - - - -
23. myhb ENSDARG00000001993 11 1.687 - - - 0.874 - - 0.813 - - myosin, heavy chain b [Source:ZFIN;Acc:ZDB-GENE-081124-1]
24. si:dkey-14o6.10 si:dkey-14o6.10 5 1.649 - - - - 0.805 - - - 0.844
25. pglyrp2 ENSDARG00000062998 11 1.644 - - 0.831 - - - 0.813 - - peptidoglycan recognition protein 2 [Source:ZFIN;Acc:ZDB-GENE-071227-1]
26. adrb1 ENSDARG00000007490, ENSDARG00000115574 9 1.618 - - - - 0.805 - 0.813 - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
27. zgc:175284 ENSDARG00000078159 29 1.601 - - 0.782 - 0.819 - - - - zgc:175284 [Source:ZFIN;Acc:ZDB-GENE-080219-49]
28. FP074874.2 ENSDARG00000105724 107 1.562 0.749 - - - - - 0.813 - -
29. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1.561 - - 0.818 - 0.743 - - - - POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
30. PEG3_27 PEG3_27 10 1.543 - - 0.831 - 0.712 - - - -
31. fgf8b ENSDARG00000039615 29 1.54 - - - - 0.727 - 0.813 - - fibroblast growth factor 8 b [Source:ZFIN;Acc:ZDB-GENE-010122-1]
32. ca4b ENSDARG00000042293 5 1.537 - - - - 0.724 - 0.813 - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
33. CU856539.2 ENSDARG00000058946 6 1.494 - - 0.742 - - - - - 0.752 myosin-IIIb [Source:NCBI gene;Acc:556989]
34. si:ch211-162i8.6 si:ch211-162i8.6 15 1.475 - - 0.730 - 0.745 - - - -
35. SNORA63_2 SNORA63_2 6 1 1.000 - - - - - - - -
36. ADAD1 ENSDARG00000089181 9 1 - - - - - - - 1.000 - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
37. DUSP23 DUSP23 121 1 1.000 - - - - - - - -
38. esr1 ENSDARG00000004111, ENSDARG00000112357 19 1 - - - 1.000 - - - - - estrogen receptor 1 [Source:ZFIN;Acc:ZDB-GENE-020806-5]
39. zgc:158846 ENSDARG00000058462, ENSDARG00000113282 161 1 1.000 - - - - - - - - zgc:158846 [Source:ZFIN;Acc:ZDB-GENE-070209-50]
40. ddr2b ENSDARG00000058695 7 1 1.000 - - - - - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
41. stpg1 ENSDARG00000103765 19 1 1.000 - - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
42. si:ch211-208f21.2 ENSDARG00000094177 61 1 1.000 - - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
43. gcshb ENSDARG00000105187 182 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
44. ccdc64 ccdc64 2 1 - - - - - - - 1.000 -
45. fam160b1 ENSDARG00000060168 22 1 1.000 - - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
46. si:ch211-219a15.3 ENSDARG00000087659 12 1 1.000 - - - - - - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
47. chrdl2 ENSDARG00000078916 9 1 - - - 1.000 - - - - - chordin-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-305]
48. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 1.000 - - - - - - - -
49. CR381673.2 ENSDARG00000103241 7 1 - - - - - - - 1.000 -
50. Metazoa_SRP_27 Metazoa_SRP_27 2 1 1.000 - - - - - - - -
51. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1 1.000 - - - - - - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
52. si:ch211-190k17.19 ENSDARG00000095756 19 1 1.000 - - - - - - - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
53. cldnd ENSDARG00000006580 17 1 1.000 - - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
54. grm1a ENSDARG00000026796 9 1 1.000 - - - - - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
55. zgc:194007 ENSDARG00000091860 4 1 - - - 1.000 - - - - - zgc:194007 [Source:ZFIN;Acc:ZDB-GENE-081022-49]
56. ddrgk1 ENSDARG00000037172 14 1 1.000 - - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
57. CU984580.1 CU984580.1 141 1 1.000 - - - - - - - -
58. dyrk1aa ENSDARG00000063570 14 1 - - - 1.000 - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, a [Source:ZFIN;Acc:ZDB-GENE-050302-29]
59. rag2 ENSDARG00000052121 15 1 1.000 - - - - - - - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
60. U3_10 U3_10 1 1 1.000 - - - - - - - -
61. GGT5 GGT5 1 1 - - - 1.000 - - - - -
62. nr5a1a ENSDARG00000103176 12 1 1.000 - - - - - - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
63. TDRD15 TDRD15 46 1 1.000 - - - - - - - -
64. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1 1.000 - - - - - - - - low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
65. BX276122.1 BX276122.1 1 1 - - - 1.000 - - - - -
66. lenep ENSDARG00000095553 11 1 1.000 - - - - - - - - lens epithelial protein [Source:ZFIN;Acc:ZDB-GENE-060130-3]
67. si:ch211-202m22.1 ENSDARG00000094491 24 1 1.000 - - - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
68. zgc:110434 21 1 1.000 - - - - - - - - zgc:110434
69. zgc:113209 ENSDARG00000100294 176 1 1.000 - - - - - - - - zgc:113209 [Source:ZFIN;Acc:ZDB-GENE-050410-8]
70. pdia2 ENSDARG00000018263 74 1 1.000 - - - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
71. elovl4b ENSDARG00000027495 107 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
72. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 1.000 - - - - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
73. zgc:172053 ENSDARG00000038321 9 1 1.000 - - - - - - - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
74. si:dkey-233e3.5 si:dkey-233e3.5 7 1 1.000 - - - - - - - -
75. si:ch211-281k19.2 ENSDARG00000098133 1 1 - - - 1.000 - - - - - si:ch211-281k19.2 [Source:ZFIN;Acc:ZDB-GENE-090311-35]
76. ascc2 ENSDARG00000013058 228 1 1.000 - - - - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
77. VDAC3 ENSDARG00000003695 34 1 1.000 - - - - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
78. nots ENSDARG00000099824 9 1 1.000 - - - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
79. dnali1 ENSDARG00000069815 10 1 1.000 - - - - - - - - dynein, axonemal, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-080204-7]
80. cnn1a ENSDARG00000017193 6 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
81. isg15 ENSDARG00000086374 8 1 - - 1.000 - - - - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
82. SLITRK4 ENSDARG00000079781 54 1 1.000 - - - - - - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
83. NFATC4 ENSDARG00000054162 44 1 1.000 - - - - - - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
84. ankrd39 ENSDARG00000041350 73 1 1.000 - - - - - - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
85. CU326366.2 ENSDARG00000068593 11 1 1.000 - - - - - - - -
86. U5_4 U5_4 1 1 1.000 - - - - - - - -
87. si:dkey-220a11.6 si:dkey-220a11.6 0 1 1.000 - - - - - - - -
88. CR388013.3 CR388013.3 45 1 1.000 - - - - - - - -
89. gas5 279 1 1.000 - - - - - - - - growth arrest-specific 5, transcript variant X4
90. MIER3 MIER3 114 1 1.000 - - - - - - - -
91. cadpsa ENSDARG00000043661 160 1 1.000 - - - - - - - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
92. BX321875.4 ENSDARG00000114661 5 1 - - - - - - - 1.000 -
93. rtel1 ENSDARG00000035074 17 1 - - - 1.000 - - - - - regulator of telomere elongation helicase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-11]
94. snoMBII-202 snoMBII-202 0 1 - - - 1.000 - - - - -
95. si:dkey-7l6.3 ENSDARG00000094514 146 1 1.000 - - - - - - - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
96. lingo3a ENSDARG00000061970 234 1 1.000 - - - - - - - - leucine rich repeat and Ig domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-060503-54]
97. BIN1 BIN1 11 1 1.000 - - - - - - - -
98. U1_29 U1_29 0 1 1.000 - - - - - - - -
99. RIMBP2_1 RIMBP2_1 57 1 1.000 - - - - - - - -
100. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1 1.000 - - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]

There are 770 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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