Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-351l9.1

Gene Name Gene ID Reads Annotation
si:ch1073-351l9.1 si:ch1073-351l9.1 1










Genes with expression patterns similar to si:ch1073-351l9.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-351l9.1 si:ch1073-351l9.1 1 3 - - - - 1.000 - - 1.000 1.000
2. wdr27 ENSDARG00000053386 2 2 - - - - 1.000 - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
3. SYNPO 2 2 - - - - 1.000 - - - 1.000 synaptopodin, transcript variant X2
4. si:dkey-9i5.1 si:dkey-9i5.1 36 2 - - - - 1.000 - - - 1.000
5. si:dkey-276l13.5 si:dkey-276l13.5 3 2 - - - - 1.000 - - - 1.000
6. SSTR2 SSTR2 12 2 - - - - 1.000 - - - 1.000
7. si:ch211-145h19.4 si:ch211-145h19.4 1 2 - - - - - - - 1.000 1.000
8. si:rp71-7l19.6 si:rp71-7l19.6 12 1.895 - - - - - - - 0.895 1.000
9. npvf ENSDARG00000036227 23 1.885 - - - - - - - 1.000 0.885 neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
10. GPT GPT 2 1.877 - - - - 0.877 - - - 1.000
11. crygm2d4 ENSDARG00000087164, ENSDARG00000115295 138 1.805 - - - - 0.872 - - 0.933 - crystallin, gamma M2d4 [Source:ZFIN;Acc:ZDB-GENE-060918-3]
12. CR391967.1 CR391967.1 135 1.78 - - - - - - - 0.973 0.807
13. CR318624.1 ENSDARG00000094618 5 1.728 - - - - 0.728 - - - 1.000
14. crhr1 ENSDARG00000003989 5 1.712 - - - - 0.712 - - 1.000 - corticotropin releasing hormone receptor 1 [Source:ZFIN;Acc:ZDB-GENE-081231-1]
15. CABZ01112732.1 ENSDARG00000068453 4 1.702 - - - - - - - 0.702 1.000 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
16. cryba1l2 ENSDARG00000014803 47 1.687 - - - - 0.820 - - 0.867 - crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
17. pax6l pax6l 54 1.678 - - - - - - - 0.821 0.857
18. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 1.643 - - - - 0.707 - - 0.936 - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
19. sparcl1 ENSDARG00000074989 80 1.625 - - - - 0.856 - - 0.769 - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
20. si:ch211-212n6.18 si:ch211-212n6.18 233 1.615 - - - - 0.723 - - 0.892 -
21. cx23 ENSDARG00000054150 115 1.562 - - - - 0.744 - - 0.818 - connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
22. mamdc2b ENSDARG00000073695 26 1.524 - - - - - - - 0.775 0.749 MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
23. cx50.5 cx50.5 15 1.485 - - - - 0.755 - - 0.730 -
24. gja3 ENSDARG00000021889, ENSDARG00000116798 49 1.433 - - - - - - - 0.718 0.715 gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
25. si:dkey-176g4.4 si:dkey-176g4.4 0 1 - - - - - - - 1.000 -
26. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
27. MOB2 MOB2 4 1 - - - - 1.000 - - - -
28. GGT5 GGT5 1 1 - - - - - - - - 1.000
29. GABRR3 GABRR3 3 1 - - - - 1.000 - - - -
30. igsf21b ENSDARG00000056084 6 1 - - - - - - - 1.000 - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
31. si:ch211-278p9.3 ENSDARG00000094098 0 1 - - - - - - - - 1.000 si:ch211-278p9.3 [Source:ZFIN;Acc:ZDB-GENE-081028-38]
32. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
33. ydjc ENSDARG00000062655 5 1 - - - - - - - 1.000 - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
34. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
35. si:ch211-196n4.2 si:ch211-196n4.2 0 1 - - - - - - - - 1.000
36. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
37. UNC80 ENSDARG00000098290 2 1 - - - - 1.000 - - - - unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
38. wibg wibg 2 1 - - - - 1.000 - - - -
39. tsg101 tsg101 1 1 - - - - - - - 1.000 -
40. lgals3bpa ENSDARG00000037805 2 1 - - - - 1.000 - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
41. lck ENSDARG00000102525, ENSDARG00000115304 1 1 - - - - - - - 1.000 - LCK proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040617-1]
42. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
43. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
44. CABZ01056274.1 CABZ01056274.1 3 1 - - - - - - - - 1.000
45. DSEL DSEL 1 1 - - - - - - - - 1.000
46. CYP27A1_2 CYP27A1_2 5 1 - - - - - - - - 1.000
47. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
48. si:ch73-379f7.5 si:ch73-379f7.5 1 1 - - - - - - - 1.000 -
49. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
50. si:dkeyp-51f11.3 si:dkeyp-51f11.3 0 1 - - - - - - - - 1.000
51. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - - - - 1.000 si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
52. CNGB3 CNGB3 7 1 - - - - - - - - 1.000
53. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
54. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - - - - - - - 1.000 si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
55. PLA2G4C_1 PLA2G4C_1 2 1 - - - - - - - - 1.000
56. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
57. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - - - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
58. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - - - 1.000 si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
59. FAM46D FAM46D 0 1 - - - - - - - - 1.000
60. FJX1 ENSDARG00000035873 22 1 - - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
61. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - - - 1.000 - - - -
62. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
63. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
64. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
65. si:ch73-177h5.2 ENSDARG00000020812 0 1 - - - - - - - - 1.000 si:ch73-177h5.2 [Source:ZFIN;Acc:ZDB-GENE-081104-247]
66. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
67. CABZ01081747.2 CABZ01081747.2 9 1 - - - - - - - - 1.000
68. BX927237.2 BX927237.2 16 1 - - - - - - - 1.000 -
69. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
70. CU570981.1 CU570981.1 9 1 - - - - 1.000 - - - -
71. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
72. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
73. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
74. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
75. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
76. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
77. F13A1 F13A1 1 1 - - - - 1.000 - - - -
78. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
79. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
80. CU469547.1 CU469547.1 0 1 - - - - 1.000 - - - -
81. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
82. si:ch211-198e13.3 5 1 - - - - - - - - 1.000 si:ch211-198e13.3, transcript variant X1
83. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
84. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
85. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
86. CR394568.1 CR394568.1 0 1 - - - - - - - - 1.000
87. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
88. si:ch211-198c19.3 ENSDARG00000095533 5 1 - - - - 1.000 - - - - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
89. si:dkey-84h14.3 si:dkey-84h14.3 3 1 - - - - - - - 1.000 -
90. ca7 ENSDARG00000045139, ENSDARG00000113549 1 1 - - - - - - - 1.000 - carbonic anhydrase VII [Source:ZFIN;Acc:ZDB-GENE-040426-1786]
91. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
92. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
93. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
94. 5S_rRNA_5 5S_rRNA_5 1 1 - - - - 1.000 - - - -
95. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
96. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
97. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
98. zgc:172323 ENSDARG00000053201 1 1 - - - - - - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
99. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - - 1.000 si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
100. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]

There are 387 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA