Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-291c23.2

Gene Name Gene ID Reads Annotation
si:ch1073-291c23.2 ENSDARG00000074869 585 si:ch1073-291c23.2 [Source:ZFIN;Acc:ZDB-GENE-081107-2]










Genes with expression patterns similar to si:ch1073-291c23.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-291c23.2 ENSDARG00000074869 585 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch1073-291c23.2 [Source:ZFIN;Acc:ZDB-GENE-081107-2]
2. pif1 ENSDARG00000020289 216 1.765 - - - 0.811 - - - - 0.954 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
3. CR376785.2 CR376785.2 175 1.732 - - - 0.785 - - - - 0.947
4. st8sia5 ENSDARG00000036584 529 1.703 - - - 0.756 - - - - 0.947 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
5. wfdc1 ENSDARG00000058003 850 1.701 - - - - - - 0.802 - 0.899 WAP four-disulfide core domain 1 [Source:ZFIN;Acc:ZDB-GENE-070112-352]
6. DUSP26 ENSDARG00000103752 404 1.684 - - - 0.812 - - - 0.872 - dual specificity phosphatase 26 [Source:HGNC Symbol;Acc:HGNC:28161]
7. prdx4 ENSDARG00000069013 1150 1.671 - - - - - - - 0.734 0.937 peroxiredoxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1096]
8. tpcn1 ENSDARG00000062362 563 1.661 - - - - - - 0.728 - 0.933 two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
9. mrps18a ENSDARG00000024465 5187 1.592 - - - - - 0.791 0.801 - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
10. anxa5b ENSDARG00000016470 2934 1.573 - - - 0.757 - - - - 0.816 annexin A5b [Source:ZFIN;Acc:ZDB-GENE-030131-9076]
11. ndufaf6 ENSDARG00000053652 351 1.515 - - - 0.777 - - 0.738 - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:ZFIN;Acc:ZDB-GENE-100112-1]
12. SMAD4_1 SMAD4_1 377 1.511 0.702 - - - - - 0.809 - -
13. si:ch211-245h7.2 si:ch211-245h7.2 317 1.508 - 0.746 - - - - 0.762 - -
14. RIN3 ENSDARG00000077618 745 1.499 - 0.761 - - - - 0.738 - - Ras and Rab interactor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8871]
15. MAP1B ENSDARG00000060434, ENSDARG00000113782 1983 1.497 - - - 0.748 - - - - 0.749 microtubule-associated protein 1B [Source:ZFIN;Acc:ZDB-GENE-130530-690]
16. uqcrc2a ENSDARG00000014794 3949 1.449 - - - 0.727 - - 0.722 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
17. rcbtb1 ENSDARG00000036645 255 0.965 - - - - - - - - 0.965 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
18. umps ENSDARG00000012215 4564 0.965 - - - - - - - - 0.965 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
19. ctnnal1 ENSDARG00000018162 747 0.964 - - - - - - - - 0.964 catenin (cadherin-associated protein), alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-507]
20. lysmd3 ENSDARG00000024693 754 0.964 - - - - - - - - 0.964 LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
21. rab11fip3 ENSDARG00000016490 661 0.963 - - - - - - - - 0.963 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
22. ror1 ENSDARG00000015176 378 0.963 - - - - - - - - 0.963 receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
23. C7H11orf68 C7H11orf68 446 0.962 - - - - - - - - 0.962
24. flrt1a 107 0.962 - - - - - - - - 0.962 fibronectin leucine rich transmembrane protein 1a, transcript variant X2
25. ptprk ENSDARG00000063416 742 0.961 - - - - - - - - 0.961 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
26. brms1lb ENSDARG00000018047 453 0.961 - - - - - - - - 0.961 BRMS1 like transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-081031-54]
27. ZNFX1 ENSDARG00000100280 118 0.961 - - - - - - - - 0.961 zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
28. smg6 ENSDARG00000100481 493 0.96 - - - - - - - - 0.960 SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
29. ZFAT ENSDARG00000077987 205 0.96 - - - - - - - - 0.960 zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
30. eef2a.1 ENSDARG00000042094 1781 0.96 - - - - - - - - 0.960 eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
31. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 0.96 - - - - - - - - 0.960 wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
32. rxrgb ENSDARG00000004697 332 0.96 - - - - - - - - 0.960 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
33. SNAP91 ENSDARG00000098809 556 0.959 - - - - - - - - 0.959 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
34. RNPEPL1 ENSDARG00000007813 557 0.958 - - - - - - - - 0.958 arginyl aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5522]
35. slc16a8 ENSDARG00000045153 478 0.958 - - - - - - - - 0.958 solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
36. RABEPK ENSDARG00000112165 112 0.958 - - - - - - - - 0.958 Rab9 effector protein with kelch motifs [Source:ZFIN;Acc:ZDB-GENE-040704-52]
37. rnf121 ENSDARG00000060282 1809 0.958 - - - - - - - - 0.958 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
38. KLF8 ENSDARG00000060661 219 0.958 - - - - - - - - 0.958 Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
39. ltc4s ENSDARG00000062598 138 0.958 - - - - - - - - 0.958 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
40. CTIF ENSDARG00000090617 270 0.958 - - - - - - - - 0.958 CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
41. ptn ENSDARG00000102340 229 0.957 - - - - - - - - 0.957 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
42. zgc:173480 171 0.957 - - - - - - - - 0.957 zgc:173480
43. nupl2 ENSDARG00000029043 105 0.957 - - - - - - - - 0.957 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
44. oraov1 497 0.957 - - - - - - - - 0.957 oral cancer overexpressed 1
45. CABZ01054405.1 CABZ01054405.1 115 0.957 - - - - - - - - 0.957
46. ttc21b ENSDARG00000012368 229 0.957 - - - - - - - - 0.957 tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
47. trim16 ENSDARG00000010673 519 0.956 - - - - - - - - 0.956 tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]
48. ube3d ENSDARG00000026178 244 0.956 - - - - - - - - 0.956 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
49. RFFL_1 RFFL_1 157 0.956 - - - - - - - - 0.956
50. abcg1 ENSDARG00000063475 97 0.956 - - - - - - - - 0.956 ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
51. si:ch211-133l11.10 ENSDARG00000005626 381 0.956 - - - - - - - - 0.956 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
52. nrxn3b ENSDARG00000062693 192 0.956 - - - - - - - - 0.956 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
53. slc6a6a ENSDARG00000012534 183 0.956 - - - - - - - - 0.956 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
54. lsm1 ENSDARG00000043177 767 0.955 - - - - - - - - 0.955 LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
55. nol8 ENSDARG00000044143 425 0.955 - - - - - - - - 0.955 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
56. dhdds ENSDARG00000039851 1135 0.954 - - - - - - - - 0.954 dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
57. si:dkey-156k2.6 si:dkey-156k2.6 848 0.954 - - - - - - - - 0.954
58. DDX47_1 DDX47_1 453 0.954 - - - - - - - - 0.954
59. gpr143 ENSDARG00000034572 559 0.954 - - - - - - - - 0.954 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
60. dkk3b ENSDARG00000070683 209 0.954 - - - - - - - - 0.954 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
61. cenpk ENSDARG00000039616 744 0.953 - - - - - - - - 0.953 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
62. AKAP12 AKAP12 140 0.953 - - - - - - - - 0.953
63. PRDM12 PRDM12 133 0.953 - - - - - - - - 0.953
64. hprt1l ENSDARG00000014866 696 0.953 - - - - - - - - 0.953 hypoxanthine phosphoribosyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040625-17]
65. nsun2 ENSDARG00000056665 740 0.953 - - - - - - - - 0.953 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
66. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.952 - - - - - - - - 0.952 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
67. TRIP10 TRIP10 1079 0.952 - - - - - - - - 0.952
68. qser1 ENSDARG00000074750 597 0.952 - - - - - - - - 0.952 glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
69. ncam2 ENSDARG00000017466 175 0.952 - - - - - - - - 0.952 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
70. CR678040.1 CR678040.1 117 0.951 - - - - - - - - 0.951
71. ankzf1 ENSDARG00000041904 917 0.951 - - - - - - - - 0.951 ankyrin repeat and zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-80]
72. slc25a43 ENSDARG00000102048 489 0.951 - - - - - - - - 0.951 solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
73. ngly1 ENSDARG00000003205 733 0.951 - - - - - - - - 0.951 N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
74. pigl ENSDARG00000067752, ENSDARG00000116105 282 0.95 - - - - - - - - 0.950 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
75. si:dkey-10p5.10 ENSDARG00000099307 371 0.95 - - - - - - - - 0.950 si:dkey-10p5.10 [Source:ZFIN;Acc:ZDB-GENE-120215-130]
76. dopey1 438 0.95 - - - - - - - - 0.950 dopey family member 1, transcript variant X4
77. TAF2 ENSDARG00000102307 1401 0.95 - - - - - - - - 0.950 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
78. yipf2 ENSDARG00000021399 702 0.95 - - - - - - - - 0.950 Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]
79. slc39a9 ENSDARG00000070447 971 0.95 - - - - - - - - 0.950 solute carrier family 39, member 9 [Source:ZFIN;Acc:ZDB-GENE-060314-3]
80. ZNF337_4 ZNF337_4 409 0.949 - - - - - - - - 0.949
81. dvl1b ENSDARG00000055552 146 0.949 - - - - - - - - 0.949 dishevelled segment polarity protein 1b [Source:ZFIN;Acc:ZDB-GENE-071004-1]
82. cdan1 ENSDARG00000042261 658 0.949 - - - - - - - - 0.949 codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
83. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 0.949 - - - - - - - - 0.949 netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
84. GANAB_1 GANAB_1 685 0.949 - - - - - - - - 0.949
85. CU861453.1 ENSDARG00000097192 271 0.949 - - - - - - - - 0.949
86. rac3a ENSDARG00000090062 394 0.948 - - - - - - - - 0.948 Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
87. CEP152 ENSDARG00000075725 391 0.948 - - - - - - - - 0.948 centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
88. mafg2 mafg2 1041 0.948 - - - - - - - - 0.948
89. prmt6 ENSDARG00000069706 484 0.948 - - - - - - - - 0.948 protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
90. aldh16a1 ENSDARG00000037935 617 0.948 - - - - - - - - 0.948 aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
91. dhrs13a.2 ENSDARG00000111240 491 0.947 - - - - - - - - 0.947 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
92. CENPF ENSDARG00000055133 436 0.947 - - - - - - - - 0.947 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
93. CDIP1 ENSDARG00000076118 1294 0.947 - - - - - - - - 0.947 cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
94. zfyve9a ENSDARG00000101903 437 0.947 - - - - - - - - 0.947 zinc finger, FYVE domain containing 9a [Source:ZFIN;Acc:ZDB-GENE-070705-182]
95. TUBB8P7_2 TUBB8P7_2 565 0.946 - - - - - - - - 0.946
96. hdac10 ENSDARG00000086458 676 0.946 - - - - - - - - 0.946 histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
97. rpusd4 ENSDARG00000012674, ENSDARG00000112436 505 0.946 - - - - - - - - 0.946 RNA pseudouridylate synthase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040801-238]
98. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 0.946 - - - - - - - - 0.946 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
99. pus7 ENSDARG00000031774 195 0.946 - - - - - - - - 0.946 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
100. hck ENSDARG00000058647 318 0.946 - - - - - - - - 0.946 HCK proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-090313-72]

There are 871 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA