Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-286c18.5

Gene Name Gene ID Reads Annotation
si:ch1073-286c18.5 ENSDARG00000098567 7391 si:ch1073-286c18.5 [Source:ZFIN;Acc:ZDB-GENE-121214-240]










Genes with expression patterns similar to si:ch1073-286c18.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-286c18.5 ENSDARG00000098567 7391 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch1073-286c18.5 [Source:ZFIN;Acc:ZDB-GENE-121214-240]
2. blcap ENSDARG00000052073 8646 2.512 - - 0.821 - - - 0.721 - 0.970 bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
3. taok2b_1 ENSDARG00000100620 2082 1.956 - - 0.990 - - - - - 0.966 TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
4. ndufa7 ENSDARG00000036684 6051 1.904 - 0.934 - - - - - - 0.970 NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
5. msna ENSDARG00000058128, ENSDARG00000114614 23727 1.896 - - 0.949 - - - - - 0.947 moesin a [Source:ZFIN;Acc:ZDB-GENE-021211-2]
6. pip5k2 pip5k2 5743 1.832 - - 0.988 - - - - - 0.844
7. acss2 ENSDARG00000037781, ENSDARG00000112371 3100 1.791 - - 0.990 - - - - - 0.801 acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
8. nccrp1 ENSDARG00000035326, ENSDARG00000113175 11385 1.786 - - - - - 0.816 - - 0.970 non-specific cytotoxic cell receptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-000210-13]
9. acsf2 ENSDARG00000061201 4413 1.755 - 0.927 - - - 0.828 - - - acyl-CoA synthetase family member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-7]
10. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 1.745 - 0.849 0.896 - - - - - - chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
11. snrpb ENSDARG00000011125 11729 1.74 - 0.787 - - - - - - 0.953 small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
12. Sep-02 Sep-02 10074 1.732 - - - - - - 0.768 - 0.964
13. plscr3b ENSDARG00000069432 8500 1.717 - 0.930 - - - - 0.787 - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
14. rac1 rac1 7341 1.702 - - - - - - 0.723 - 0.979
15. prkab1b ENSDARG00000046143 8640 1.674 - - - - - - 0.717 - 0.957 protein kinase, AMP-activated, beta 1 non-catalytic subunit, b [Source:ZFIN;Acc:ZDB-GENE-030131-7172]
16. RABGAP1 ENSDARG00000098967 933 1.673 - 0.936 - - - - 0.737 - - RAB GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-170622-1]
17. CABZ01028296.1 CABZ01028296.1 6203 1.669 - 0.833 - - - 0.836 - - -
18. HNRNPAB HNRNPAB 22267 1.66 - 0.858 - - - 0.802 - - -
19. tegt ENSDARG00000077934 27182 1.597 - 0.805 - - - - - - 0.792 testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
20. rpl9 ENSDARG00000037350, ENSDARG00000112384 136513 1.487 - - 0.738 - - 0.749 - - - ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
21. ch1073-291c23.1 2426 1.445 - - - - - - 0.716 0.729 - ch1073-291c23.1, transcript variant X6
22. AL772300.3 AL772300.3 1752 0.994 - - 0.994 - - - - - -
23. aars ENSDARG00000069142, ENSDARG00000113882 10348 0.993 - 0.993 - - - - - - - alanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-3663]
24. sh3bgrl3 ENSDARG00000098075 3071 0.993 - - 0.993 - - - - - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
25. suz12a ENSDARG00000070256 2229 0.992 - - 0.992 - - - - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
26. rab35 rab35 1287 0.992 - - 0.992 - - - - - -
27. GSG2 GSG2 1162 0.992 - - 0.992 - - - - - -
28. rad54l ENSDARG00000018623 837 0.992 - - 0.992 - - - - - - RAD54 like [Source:ZFIN;Acc:ZDB-GENE-040426-968]
29. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 0.992 - - 0.992 - - - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
30. wnt7bb ENSDARG00000071107 1158 0.991 - - 0.991 - - - - - - wingless-type MMTV integration site family, member 7Bb [Source:ZFIN;Acc:ZDB-GENE-081006-1]
31. egr2a ENSDARG00000044098 1101 0.991 - - 0.991 - - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
32. cops5 ENSDARG00000057624 1485 0.991 - - 0.991 - - - - - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
33. aup1 ENSDARG00000092609 2431 0.991 - - 0.991 - - - - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
34. gnb4b ENSDARG00000115383 7457 0.991 - - 0.991 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
35. ddx3 ddx3 4076 0.99 - - 0.990 - - - - - -
36. METTL18 ENSDARG00000074588 918 0.99 - - 0.990 - - - - - - methyltransferase like 18 [Source:HGNC Symbol;Acc:HGNC:28793]
37. FUZ ENSDARG00000079730 821 0.99 - - 0.990 - - - - - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
38. slc4a2b ENSDARG00000052330 1900 0.99 - - 0.990 - - - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
39. map3k3 ENSDARG00000060348 1482 0.99 - - 0.990 - - - - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
40. pde12 ENSDARG00000030964 615 0.99 - - 0.990 - - - - - - phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
41. arl15b ENSDARG00000057995, ENSDARG00000109775 1243 0.99 - - 0.990 - - - - - - ADP-ribosylation factor-like 15b [Source:ZFIN;Acc:ZDB-GENE-080813-2]
42. zdhhc6 ENSDARG00000075721 1494 0.99 - - 0.990 - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
43. abca3b ENSDARG00000100524 2416 0.99 - - 0.990 - - - - - - ATP-binding cassette, sub-family A (ABC1), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-2]
44. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.99 - - 0.990 - - - - - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
45. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.99 - - 0.990 - - - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
46. tbp ENSDARG00000014994 1591 0.99 - - 0.990 - - - - - - TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
47. trps1 ENSDARG00000104082 918 0.99 - - 0.990 - - - - - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
48. CABZ01034082.1 ENSDARG00000099583 2237 0.99 - - 0.990 - - - - - -
49. ENSDARG00000087348 ENSDARG00000087348 2870 0.99 - - 0.990 - - - - - -
50. pgam5 ENSDARG00000035608 4044 0.99 - - 0.990 - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
51. hyi ENSDARG00000030166 1199 0.99 - - 0.990 - - - - - - hydroxypyruvate isomerase [Source:ZFIN;Acc:ZDB-GENE-040426-1273]
52. psma6b ENSDARG00000013966 4410 0.99 - - 0.990 - - - - - - proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
53. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 0.99 - - 0.990 - - - - - - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
54. lipg ENSDARG00000031044 1516 0.99 - - 0.990 - - - - - - lipase, endothelial [Source:ZFIN;Acc:ZDB-GENE-040426-699]
55. lmx1bb ENSDARG00000068365 627 0.99 - - 0.990 - - - - - - LIM homeobox transcription factor 1, beta b [Source:ZFIN;Acc:ZDB-GENE-050114-2]
56. serpine2 ENSDARG00000029353 2274 0.99 - - 0.990 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
57. rnmt ENSDARG00000070553 1743 0.99 - - 0.990 - - - - - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
58. brd8 ENSDARG00000025071 2605 0.99 - - 0.990 - - - - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
59. poc5 ENSDARG00000059982 569 0.99 - - 0.990 - - - - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
60. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 0.99 - - 0.990 - - - - - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
61. dnajc2 ENSDARG00000070477 902 0.989 - - 0.989 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1912]
62. DACT3_1 DACT3_1 1235 0.989 - - 0.989 - - - - - -
63. si:ch211-10d23.5 ENSDARG00000095510 2632 0.989 - - 0.989 - - - - - - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
64. si:ch211-266d19.4 ENSDARG00000012642 1251 0.989 - - 0.989 - - - - - - si:ch211-266d19.4 [Source:ZFIN;Acc:ZDB-GENE-091204-74]
65. C5H2orf68 C5H2orf68 849 0.989 - - 0.989 - - - - - -
66. eif3k ENSDARG00000068289 1102 0.989 - - 0.989 - - - - - - eukaryotic translation initiation factor 3, subunit K [Source:ZFIN;Acc:ZDB-GENE-050417-45]
67. PYURF ENSDARG00000045773 4576 0.988 - - 0.988 - - - - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
68. slc39a10 ENSDARG00000005823 2634 0.988 - - 0.988 - - - - - - solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
69. ptbp2a ENSDARG00000101947 1921 0.988 - - 0.988 - - - - - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
70. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 0.988 - - 0.988 - - - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
71. sypl2b ENSDARG00000000690 2006 0.988 - - 0.988 - - - - - - synaptophysin-like 2b [Source:ZFIN;Acc:ZDB-GENE-050417-309]
72. fam118b ENSDARG00000078983 1822 0.988 - - 0.988 - - - - - - family with sequence similarity 118, member B [Source:ZFIN;Acc:ZDB-GENE-060810-6]
73. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 0.988 - - 0.988 - - - - - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
74. sri ENSDARG00000058593 13152 0.987 - - 0.987 - - - - - - sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
75. hmbox1a ENSDARG00000027082 2569 0.987 - - 0.987 - - - - - - homeobox containing 1a [Source:ZFIN;Acc:ZDB-GENE-050913-89]
76. ndufv3 ENSDARG00000090389 4829 0.987 - - 0.987 - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
77. msxc msxc 3142 0.985 - - 0.985 - - - - - -
78. rad23b ENSDARG00000021550 2575 0.985 - - 0.985 - - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:ZFIN;Acc:ZDB-GENE-040426-1487]
79. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 0.985 - - 0.985 - - - - - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
80. ube2d3 ENSDARG00000038473 4096 0.984 - 0.984 - - - - - - - ubiquitin-conjugating enzyme E2D 3 [Source:ZFIN;Acc:ZDB-GENE-030131-551]
81. coq10b ENSDARG00000056141 1532 0.984 - 0.984 - - - - - - - coenzyme Q10B [Source:ZFIN;Acc:ZDB-GENE-050417-263]
82. dnmt1 ENSDARG00000030756 2741 0.984 - - 0.984 - - - - - - DNA (cytosine-5-)-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-990714-15]
83. cdk2 ENSDARG00000026577 2835 0.983 - - 0.983 - - - - - - cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
84. si:dkey-238c7.12 si:dkey-238c7.12 6600 0.983 - - 0.983 - - - - - -
85. atp6v1f ENSDARG00000045543 3445 0.983 - 0.983 - - - - - - - ATPase H+ transporting V1 subunit F [Source:ZFIN;Acc:ZDB-GENE-040718-259]
86. cmpk ENSDARG00000019924 8676 0.981 - - 0.981 - - - - - - cytidylate kinase [Source:ZFIN;Acc:ZDB-GENE-040426-2113]
87. zgc:162944 ENSDARG00000069846, ENSDARG00000112524 3898 0.981 - - 0.981 - - - - - - zgc:162944 [Source:ZFIN;Acc:ZDB-GENE-070424-75]
88. tle2 5014 0.98 - - 0.980 - - - - - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
89. stip1 ENSDARG00000004906 7742 0.98 - - 0.980 - - - - - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
90. clic4 ENSDARG00000022995 6064 0.98 - - 0.980 - - - - - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
91. sepw2a 8597 0.979 - - 0.979 - - - - - - selenoprotein W, 2a
92. s100v1 ENSDARG00000070427 6633 0.979 - 0.979 - - - - - - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
93. arhgef12b ENSDARG00000100913 1358 0.979 - - - - - - - - 0.979 Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
94. sf3b14 sf3b14 9434 0.978 - 0.978 - - - - - - -
95. gnl3 ENSDARG00000006219 3854 0.978 - - 0.978 - - - - - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
96. btg2 ENSDARG00000020298 6616 0.977 - - 0.977 - - - - - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
97. kctd5 kctd5 13455 0.976 - - 0.976 - - - - - -
98. znf706 ENSDARG00000056307 12518 0.976 - 0.976 - - - - - - - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
99. kmt2cb ENSDARG00000075560 4816 0.973 - - 0.973 - - - - - - lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
100. kpnb3 ENSDARG00000040245 7967 0.973 - - 0.973 - - - - - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]

There are 503 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA