Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-174d20.2

Gene Name Gene ID Reads Annotation
si:ch1073-174d20.2 ENSDARG00000079651 171 si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]










Genes with expression patterns similar to si:ch1073-174d20.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-174d20.2 ENSDARG00000079651 171 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
2. atrip ENSDARG00000063076 385 2.614 - - - 0.787 - - 0.863 0.964 - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
3. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 2.543 - - - 0.861 - 0.805 0.877 - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
4. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 2.256 - - - 0.793 - - 0.708 0.755 - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
5. twf1b ENSDARG00000011661 630 1.81 - - - - - - 0.878 0.932 - twinfilin actin-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040711-3]
6. rxrgb ENSDARG00000004697 332 1.798 - - - 0.857 - - - 0.941 - retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
7. ppcs ENSDARG00000061889 224 1.777 - - - 0.889 - - 0.888 - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
8. zgc:173480 171 1.776 - - - 0.895 - - - 0.881 - zgc:173480
9. tmem201 ENSDARG00000077307 453 1.775 - - - - - - 0.866 0.909 - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
10. SLC29A2 ENSDARG00000001767, ENSDARG00000115816 1392 1.756 - - - 0.821 - - 0.935 - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
11. dopey1 438 1.749 - - - 0.847 - - 0.902 - - dopey family member 1, transcript variant X4
12. si:ch211-174j14.2 ENSDARG00000093015 111 1.732 - - - 0.866 - - 0.866 - - si:ch211-174j14.2 [Source:ZFIN;Acc:ZDB-GENE-050419-63]
13. hoxa11a ENSDARG00000104162 283 1.719 - - - - - 0.750 - 0.969 - homeobox A11a [Source:ZFIN;Acc:ZDB-GENE-000823-8]
14. fam198b ENSDARG00000077054 98 1.713 - 0.824 - 0.889 - - - - - family with sequence similarity 198, member B [Source:ZFIN;Acc:ZDB-GENE-100105-1]
15. TPMT_1 TPMT_1 214 1.692 - - - - - - 0.787 0.905 -
16. IRS2 IRS2 485 1.691 - - - 0.823 - - - 0.868 -
17. MTFP1 210 1.685 - - - - - - 0.744 0.941 - mitochondrial fission process 1
18. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 1.683 - - - 0.777 - - - 0.906 - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
19. phactr2 ENSDARG00000027172 306 1.679 - - - - - - 0.769 0.910 - phosphatase and actin regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040724-11]
20. abhd17b ENSDARG00000035571 745 1.671 - - - 0.857 - - 0.814 - - abhydrolase domain containing 17B [Source:ZFIN;Acc:ZDB-GENE-040718-244]
21. CR848664.3 CR848664.3 183 1.67 - - - - - 0.728 - 0.942 -
22. tfec ENSDARG00000098745 1399 1.667 - - - - - - 0.813 0.854 - transcription factor EC [Source:ZFIN;Acc:ZDB-GENE-041210-21]
23. zgc:77816 zgc:77816 800 1.661 - - - - - 0.839 0.822 - -
24. si:dkey-176f19.6 si:dkey-176f19.6 373 1.658 - - - 0.834 - - 0.824 - -
25. BX088524.2 ENSDARG00000103268 564 1.649 - - - - - - 0.808 0.841 -
26. par1 par1 564 1.645 - - - - - 0.825 - 0.820 -
27. LSM5 ENSDARG00000071573 371 1.638 - 0.795 - - - - - 0.843 - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
28. mier1b ENSDARG00000001447 1680 1.632 - - - - - - 0.706 0.926 - mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
29. tulp4 tulp4 1520 1.63 - - - 0.806 - - 0.824 - -
30. VPRBP VPRBP 727 1.63 - 0.736 - - - 0.894 - - -
31. fam73b 76 1.629 - 0.806 - - - 0.823 - - - family with sequence similarity 73, member B
32. dnph1 ENSDARG00000075730 403 1.628 - - - 0.740 - - 0.888 - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
33. si:ch211-207m11.3 si:ch211-207m11.3 401 1.627 - 0.793 - - - - 0.834 - -
34. CABZ01072534.1 CABZ01072534.1 69 1.624 - - - - - 0.763 0.861 - -
35. si:dkey-247i3.3 si:dkey-247i3.3 297 1.619 - - - - - 0.775 0.844 - -
36. SIPA1L3 ENSDARG00000061699 268 1.611 - - - - - 0.848 0.763 - - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
37. CR762484.3 CR762484.3 395 1.603 - - - 0.819 - - 0.784 - -
38. skia ENSDARG00000042151 1850 1.601 - - - 0.895 - - 0.706 - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
39. rhot1a ENSDARG00000099996 2059 1.597 - - - 0.729 - - - 0.868 - ras homolog family member T1a [Source:ZFIN;Acc:ZDB-GENE-030131-5354]
40. abcb10 ENSDARG00000061591 253 1.597 - 0.765 - - - - 0.832 - - ATP-binding cassette, sub-family B (MDR/TAP), member 10 [Source:ZFIN;Acc:ZDB-GENE-040525-2]
41. swap70a ENSDARG00000051819 115 1.596 - - - - - 0.814 0.782 - - switching B cell complex subunit SWAP70a [Source:ZFIN;Acc:ZDB-GENE-040426-1182]
42. gpx7 ENSDARG00000091511 3045 1.595 - - - 0.779 - - 0.816 - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
43. si:dkey-165g20.5 si:dkey-165g20.5 125 1.592 - 0.857 - - - 0.735 - - -
44. ENSDARG00000090222 ENSDARG00000090222 402 1.588 - 0.864 - - - 0.724 - - -
45. dram2b ENSDARG00000044241 503 1.587 - - - - - 0.816 0.771 - - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
46. Mar-02_1 Mar-02_1 146 1.586 - 0.802 - - - - 0.784 - -
47. csde1_1 ENSDARG00000074758 2759 1.584 - - - 0.812 - - 0.772 - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
48. CR954963.1 ENSDARG00000097153 1135 1.583 - 0.796 - - - - 0.787 - -
49. lpcat2 ENSDARG00000053010 137 1.583 - - - - - 0.703 0.880 - - lysophosphatidylcholine acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-229]
50. zwilch ENSDARG00000057100 408 1.578 - - - 0.847 - - 0.731 - - zwilch kinetochore protein [Source:ZFIN;Acc:ZDB-GENE-050420-101]
51. chtf18 ENSDARG00000058480, ENSDARG00000111334 506 1.573 - - - - - 0.710 0.863 - - CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-508]
52. fam49bb ENSDARG00000045417 513 1.565 - - - 0.838 - - - 0.727 - family with sequence similarity 49, member Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2590]
53. pola2 ENSDARG00000015070 2286 1.565 - - - - - 0.784 0.781 - - polymerase (DNA directed), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-778]
54. pask ENSDARG00000075008 302 1.562 0.720 - - - - - - 0.842 - PAS domain containing serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-1394]
55. tom1 ENSDARG00000104581 1457 1.549 - - - 0.795 - - 0.754 - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
56. CABZ01028770.1 ENSDARG00000099506 700 1.544 - - - - - - 0.744 0.800 - ras-related C3 botulinum toxin substrate 1-like [Source:NCBI gene;Acc:100537765]
57. bbs4 ENSDARG00000063522 247 1.539 - - - - - 0.707 0.832 - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
58. b4galt7 ENSDARG00000021899 546 1.538 - 0.703 - - - - 0.835 - - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
59. trim35-39 ENSDARG00000071241 464 1.535 - 0.727 - - - - - 0.808 - tripartite motif containing 35-39 [Source:ZFIN;Acc:ZDB-GENE-080219-13]
60. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.508 - 0.741 - - - - 0.767 - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
61. CABZ01020207.1 CABZ01020207.1 145 1.505 - 0.797 - - - 0.708 - - -
62. ADAMTS17 ENSDARG00000075555 887 1.502 - - - 0.799 - - - 0.703 - ADAM metallopeptidase with thrombospondin type 1 motif, 17 [Source:ZFIN;Acc:ZDB-GENE-121030-7]
63. nr2c2ap ENSDARG00000056162 368 1.501 - 0.744 - - - - 0.757 - - nuclear receptor 2C2-associated protein [Source:ZFIN;Acc:ZDB-GENE-050208-758]
64. foxi1 ENSDARG00000104566 176 1.483 - 0.706 - - - - - 0.777 - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
65. fam58a 423 1.483 0.751 - - 0.732 - - - - - family with sequence similarity 58, member A, transcript variant X1
66. plekha8 ENSDARG00000040698 431 1.481 - - - - - - 0.753 0.728 - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 [Source:ZFIN;Acc:ZDB-GENE-041114-69]
67. gadd45aa ENSDARG00000043581 114 1.481 - 0.707 - - - - 0.774 - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
68. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 1.442 - - - - - 0.709 0.733 - - Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
69. DAPK2 DAPK2 283 1.435 - 0.725 - - - - 0.710 - -
70. phf3 ENSDARG00000034768 1372 1.429 - - - 0.705 - - 0.724 - - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
71. prkacab ENSDARG00000016809 1441 1.427 - - - - - - 0.718 0.709 - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-040801-208]
72. BX511006.2 BX511006.2 29 0.986 - - - - - - - 0.986 -
73. trmt5 ENSDARG00000069278 228 0.986 - - - - - - - 0.986 - TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
74. ba1 69 0.986 - - - - - - - 0.986 - ba1 globin
75. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 0.986 - - - - - - - 0.986 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
76. KIF21B ENSDARG00000009733 53 0.986 - - - - - - - 0.986 - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
77. bcl3 ENSDARG00000087832 69 0.984 - - - - - - - 0.984 - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
78. ubr1 ENSDARG00000060480 71 0.983 - - - - - - - 0.983 - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
79. GABRR1 ENSDARG00000043902 71 0.983 - - - - - - - 0.983 - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
80. srd5a2a ENSDARG00000043587 21 0.983 - - - - - - - 0.983 - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
81. si:dkey-11c5.11 ENSDARG00000096637 130 0.983 - - - 0.983 - - - - - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
82. tmprss13b ENSDARG00000077573 47 0.982 - - - - - - - 0.982 - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
83. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 0.981 - - - - - - - 0.981 - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
84. TMCO6 ENSDARG00000016336, ENSDARG00000111305 221 0.977 - - - - - - - 0.977 - transmembrane and coiled-coil domains 6 [Source:ZFIN;Acc:ZDB-GENE-070410-47]
85. si:dkey-152b24.6 ENSDARG00000105043 39 0.976 - - - - - - - 0.976 - si:dkey-152b24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-31]
86. si:zfos-364h11.1 99 0.975 - - - - - - - 0.975 - si:zfos-364h11.1, transcript variant X4
87. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 0.975 - - - - - - - 0.975 - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
88. nlgn1 ENSDARG00000077710 72 0.974 - - - - - - - 0.974 - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
89. slc5a3a ENSDARG00000010376 134 0.973 - - - - - - - 0.973 - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-090312-3]
90. nphp4 ENSDARG00000069014 77 0.972 - - - - - - - 0.972 - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
91. ZBTB8A ENSDARG00000059226 98 0.971 - - - - - - - 0.971 - zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
92. lrriq1 ENSDARG00000093781 83 0.97 - - - - - - - 0.970 - leucine-rich repeats and IQ motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-235]
93. CT573468.1 CT573468.1 283 0.969 - - - - - - - 0.969 -
94. RHBDF1 RHBDF1 131 0.969 - - - - - - - 0.969 -
95. CU469544.1 CU469544.1 219 0.967 - - - - - - - 0.967 -
96. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.967 - - - - - - - 0.967 - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
97. GFRAL ENSDARG00000089709 167 0.965 - - - - - - - 0.965 - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
98. myo5aa ENSDARG00000061635, ENSDARG00000116722 280 0.965 - - - - - - - 0.965 - myosin VAa [Source:ZFIN;Acc:ZDB-GENE-041027-2]
99. ASPH ENSDARG00000055945 214 0.964 - - - - - - - 0.964 - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
100. CPNE8_1 CPNE8_1 140 0.964 - - - - - - - 0.964 -

There are 1618 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA