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Results for shroom1

Gene Name Gene ID Reads Annotation
shroom1 ENSDARG00000094181 2325 shroom family member 1 [Source:ZFIN;Acc:ZDB-GENE-091204-385]










Genes with expression patterns similar to shroom1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. shroom1 ENSDARG00000094181 2325 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 shroom family member 1 [Source:ZFIN;Acc:ZDB-GENE-091204-385]
2. tmed2 ENSDARG00000026908 9070 1.969 - - - - - 0.971 0.998 - - transmembrane p24 trafficking protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-269]
3. eif4g2b ENSDARG00000057167 22982 1.853 - - - - - 0.875 0.978 - - eukaryotic translation initiation factor 4, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6550]
4. HECW1 HECW1 1531 1.803 - 0.803 - - - - 1.000 - -
5. meaf6 ENSDARG00000101216 6865 1.765 - 0.801 - - - 0.964 - - - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
6. ACVR2B 6615 1.737 - 0.737 - - - - 1.000 - - activin A receptor, type IIB
7. znf827 ENSDARG00000076171 6304 1.731 - 0.794 - - - - 0.937 - - zinc finger protein 827 [Source:ZFIN;Acc:ZDB-GENE-080728-3]
8. pex19 ENSDARG00000004891 2317 1.717 - 0.757 - - - 0.960 - - - peroxisomal biogenesis factor 19 [Source:ZFIN;Acc:ZDB-GENE-050417-424]
9. dcaf17 ENSDARG00000074909 913 1.715 - 0.715 - - - - 1.000 - - ddb1 and cul4 associated factor 17 [Source:ZFIN;Acc:ZDB-GENE-071008-1]
10. minos1 ENSDARG00000101619 5273 1.711 - 0.750 - - - 0.961 - - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
11. PYURF ENSDARG00000045773 4576 1.686 - 0.710 - - - 0.976 - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
12. myoz1b ENSDARG00000071445 13381 1.65 - - - - - 0.776 0.874 - - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
13. snai1b ENSDARG00000046019 886 1.535 - 0.800 - - - - - 0.735 - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
14. VPS37B_1 VPS37B_1 1816 1.481 - 0.737 - - - 0.744 - - -
15. rbm14b ENSDARG00000103834 1597 1 - - - - - - 1.000 - - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]
16. rbmx2 ENSDARG00000044380, ENSDARG00000115698 2528 1 - - - - - - 1.000 - - RNA binding motif protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-050626-88]
17. LURAP1 ENSDARG00000044406, ENSDARG00000115301 938 1 - - - - - - 1.000 - - leucine rich adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-35]
18. dap3 ENSDARG00000078500 2724 1 - - - - - - 1.000 - - death associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-051129-2]
19. map2k4b ENSDARG00000077177 1869 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase 4b [Source:ZFIN;Acc:ZDB-GENE-080721-13]
20. TMEM255A ENSDARG00000073911 924 1 - - - - - - 1.000 - - transmembrane protein 255A [Source:ZFIN;Acc:ZDB-GENE-070412-2]
21. smcr7a smcr7a 1356 1 - - - - - - 1.000 - -
22. C18H12orf23 C18H12orf23 5362 1 - - - - - - 1.000 - -
23. dhps ENSDARG00000003270 827 1 - - - - - - 1.000 - - deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
24. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1 - - - - - - 1.000 - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
25. slc38a4 ENSDARG00000018149 2344 1 - - - - - - 1.000 - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
26. gcdh gcdh 1390 1 - - - - - - 1.000 - -
27. dtna ENSDARG00000031015 1746 1 - - - - - - 1.000 - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
28. zc3hc1 ENSDARG00000062651 1552 1 - - - - - - 1.000 - - zinc finger, C3HC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-061013-94]
29. prrc2c ENSDARG00000057583, ENSDARG00000116399 1673 1 - - - - - - 1.000 - - proline-rich coiled-coil 2C [Source:ZFIN;Acc:ZDB-GENE-081104-156]
30. med1 ENSDARG00000075340 2421 1 - - - - - - 1.000 - - mediator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081104-257]
31. mapk14b ENSDARG00000028721 1486 1 - - - - - - 1.000 - - mitogen-activated protein kinase 14b [Source:ZFIN;Acc:ZDB-GENE-021007-1]
32. spred2a ENSDARG00000052435 1624 1 - - - - - - 1.000 - - sprouty-related, EVH1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-110830-2]
33. LRIG3 ENSDARG00000079363 909 1 - - - - - - 1.000 - - leucine-rich repeats and immunoglobulin-like domains 3 [Source:ZFIN;Acc:ZDB-GENE-130530-866]
34. btbd3a ENSDARG00000005544 595 1 - - - - - - 1.000 - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
35. cebpg ENSDARG00000036073 3791 1 - - - - - - 1.000 - - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
36. wu:fj05h12 wu:fj05h12 6166 1 - - - - - - 1.000 - -
37. znf740 znf740 2458 1 - - - - - - 1.000 - -
38. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1 - - - - - - 1.000 - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
39. aplp1 ENSDARG00000098368 2317 1 - - - - - - 1.000 - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
40. kiaa0907 1674 1 - - - - - - 1.000 - - KIAA0907 protein, transcript variant X7
41. gid8b ENSDARG00000037589 2121 1 - - - - - - 1.000 - - GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
42. anxa11a ENSDARG00000077383 4076 0.999 - - - - - - 0.999 - - annexin A11a [Source:ZFIN;Acc:ZDB-GENE-030707-4]
43. BOLA2B BOLA2B 2957 0.999 - - - - - - 0.999 - -
44. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 0.999 - - - - - - 0.999 - - translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
45. slc31a1 ENSDARG00000013961, ENSDARG00000110656 4072 0.999 - - - - - - 0.999 - - solute carrier family 31 (copper transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040415-3]
46. MAF1 ENSDARG00000013122 6899 0.999 - - - - - - 0.999 - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
47. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 0.999 - - - - - - 0.999 - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
48. atp1a3a ENSDARG00000018259 5393 0.999 - - - - - - 0.999 - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
49. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 0.999 - - - - - - 0.999 - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
50. nkd1 ENSDARG00000020053 4450 0.999 - - - - - - 0.999 - - naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
51. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 0.998 - - - - - - 0.998 - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
52. G3BP2 ENSDARG00000014790 9380 0.998 - - - - - - 0.998 - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
53. kpna2 ENSDARG00000038066 7954 0.998 - - - - - - 0.998 - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
54. dlb ENSDARG00000004232 5120 0.998 - - - - - - 0.998 - - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
55. her6 ENSDARG00000006514, ENSDARG00000111099 7477 0.998 - - - - - - 0.998 - - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
56. atp5mf ENSDARG00000037867 11052 0.997 - - - - - - 0.997 - - ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
57. c8g ENSDARG00000032098 1368 0.997 - - - - - - 0.997 - - complement component 8, gamma polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-1898]
58. arf6a ENSDARG00000101626 2959 0.995 - - - - - - 0.995 - - ADP-ribosylation factor 6a [Source:ZFIN;Acc:ZDB-GENE-030131-8007]
59. PCBP4 ENSDARG00000024276 3194 0.995 - - - - - - 0.995 - - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
60. ucmab ENSDARG00000005485 1808 0.994 - - - - - - 0.994 - - upper zone of growth plate and cartilage matrix associated b [Source:ZFIN;Acc:ZDB-GENE-040426-2368]
61. zgc:158387 zgc:158387 9147 0.994 - - - - - - 0.994 - -
62. pdha1a ENSDARG00000012387, ENSDARG00000116841 8358 0.994 - - - - - - 0.994 - - pyruvate dehydrogenase E1 alpha 1 subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2719]
63. ndufs3 ENSDARG00000015385 7790 0.993 - - - - - - 0.993 - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
64. fam129ba ENSDARG00000062970 1578 0.992 - - - - - 0.992 - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
65. ube2l3a ENSDARG00000110975, ENSDARG00000112087 2899 0.992 - - - - - 0.992 - - - ubiquitin-conjugating enzyme E2L 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2977]
66. pcna ENSDARG00000054155 89521 0.99 - - - - - - 0.990 - - proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
67. rbm4.2 ENSDARG00000055080 5241 0.99 - - - - - 0.990 - - - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
68. psma5 ENSDARG00000003526, ENSDARG00000116794 5106 0.989 - - - - - - 0.989 - - proteasome subunit alpha 5 [Source:ZFIN;Acc:ZDB-GENE-040625-96]
69. hif1ab ENSDARG00000034293 10284 0.989 - - - - - - 0.989 - - hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]
70. ing4 ENSDARG00000030716 5908 0.989 - - - - - - 0.989 - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
71. prdx6 ENSDARG00000043511, ENSDARG00000116085 3456 0.989 - - - - - - 0.989 - - peroxiredoxin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1778]
72. nr2f5 ENSDARG00000033172 11808 0.987 - - - - - - 0.987 - - nuclear receptor subfamily 2, group F, member 5 [Source:ZFIN;Acc:ZDB-GENE-990415-253]
73. bzw1a ENSDARG00000010481 28451 0.986 - - - - - - 0.986 - - basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
74. alyref ENSDARG00000077732 25934 0.986 - - - - - - 0.986 - - Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
75. CABZ01034848.1 CABZ01034848.1 9936 0.985 - - - - - - 0.985 - -
76. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 0.985 - - - - - - 0.985 - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
77. lman2 ENSDARG00000061854 6251 0.983 - - - - - 0.983 - - - lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
78. gclc ENSDARG00000013095 2146 0.982 - - - - - 0.982 - - - glutamate-cysteine ligase, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5056]
79. clint1a ENSDARG00000025535 4965 0.981 - - - - - 0.981 - - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
80. cdca5 ENSDARG00000044437 2041 0.981 - - - - - 0.981 - - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
81. cxcl14 ENSDARG00000056627, ENSDARG00000113190 4665 0.981 - - - - - 0.981 - - - chemokine (C-X-C motif) ligand 14 [Source:ZFIN;Acc:ZDB-GENE-000619-1]
82. WDR61 ENSDARG00000007755 2827 0.981 - - - - - 0.981 - - - WD repeat domain 61 [Source:ZFIN;Acc:ZDB-GENE-040426-1851]
83. C19H18orf21_1 C19H18orf21_1 1657 0.98 - - - - - 0.980 - - -
84. rrm1 ENSDARG00000014017 7296 0.979 - - - - - 0.979 - - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
85. prtgb ENSDARG00000040442 12365 0.979 - - - - - - 0.979 - - protogenin homolog b (Gallus gallus) [Source:ZFIN;Acc:ZDB-GENE-060302-1]
86. rab13 ENSDARG00000034771 3065 0.978 - - - - - 0.978 - - - RAB13, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-30]
87. kcnj1a.5 ENSDARG00000089060 617 0.977 - - - - - 0.977 - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-050420-120]
88. zgc:101000 zgc:101000 9041 0.976 - - - - - 0.976 - - -
89. slc16a12b ENSDARG00000089885 3744 0.976 - - - - - 0.976 - - - solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
90. gnb4b ENSDARG00000115383 7457 0.974 - - - - - 0.974 - - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
91. sumo1 ENSDARG00000044267 4242 0.974 - - - - - 0.974 - - - small ubiquitin-like modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2186]
92. snx1a ENSDARG00000071031 3975 0.973 - - - - - 0.973 - - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
93. sdhb ENSDARG00000075768 5493 0.973 - - - - - 0.973 - - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
94. elovl1a ENSDARG00000099960 1650 0.973 - - - - - 0.973 - - - ELOVL fatty acid elongase 1a [Source:ZFIN;Acc:ZDB-GENE-041010-66]
95. ndufa2 ENSDARG00000021984 4754 0.973 - - - - - 0.973 - - - NADH:ubiquinone oxidoreductase subunit A2 [Source:ZFIN;Acc:ZDB-GENE-050522-377]
96. perp ENSDARG00000063572 6423 0.972 - - - - - 0.972 - - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
97. cul3a ENSDARG00000038967 6155 0.971 - - - - - 0.971 - - - cullin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3376]
98. srsf11 ENSDARG00000098574 12801 0.971 - - - - - 0.971 - - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
99. sri ENSDARG00000058593 13152 0.971 - - - - - - 0.971 - - sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
100. cd99 ENSDARG00000051975 3824 0.97 - - - - - 0.970 - - - CD99 molecule [Source:ZFIN;Acc:ZDB-GENE-061103-391]

There are 461 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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