Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for shq1

Gene Name Gene ID Reads Annotation
shq1 ENSDARG00000058522 123 SHQ1, H/ACA ribonucleoprotein assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-1412]










Genes with expression patterns similar to shq1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. shq1 ENSDARG00000058522 123 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SHQ1, H/ACA ribonucleoprotein assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-1412]
2. fbln5 ENSDARG00000039273 105 1.747 - 0.999 - - 0.748 - - - - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
3. CABZ01080492.1 CABZ01080492.1 495 1.727 - 0.994 - - - 0.733 - - -
4. sox11a ENSDARG00000077811 25 1.725 0.956 - - - 0.769 - - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
5. SCARB2 SCARB2 24 1.712 0.956 - - - - 0.756 - - -
6. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1.707 0.956 - - - 0.751 - - - -
7. ndst2a ENSDARG00000086269 754 1.7 - 0.941 - - 0.759 - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
8. nme6 ENSDARG00000016138 207 1.685 0.717 0.968 - - - - - - - NME/NM23 nucleoside diphosphate kinase 6 [Source:ZFIN;Acc:ZDB-GENE-000710-3]
9. ascc2 ENSDARG00000013058 228 1.685 0.956 - - - - 0.729 - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
10. rag2 ENSDARG00000052121 15 1.656 0.956 - - - - 0.700 - - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
11. FBXO33 ENSDARG00000075400 1164 1.588 - 0.821 - - - - 0.767 - - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
12. PEG3_10 PEG3_10 45 1.555 0.822 - - - - 0.733 - - -
13. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 1.48 - 0.746 - - - 0.734 - - - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
14. FOXO6_1 FOXO6_1 73 1 - 1.000 - - - - - - -
15. fam69c ENSDARG00000105040 295 0.999 - 0.999 - - - - - - - family with sequence similarity 69, member C [Source:ZFIN;Acc:ZDB-GENE-030131-8001]
16. si:dkey-261l7.2 ENSDARG00000094345 51 0.999 - 0.999 - - - - - - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
17. si:ch211-191a16.2 ENSDARG00000095665 16 0.999 - 0.999 - - - - - - - si:ch211-191a16.2 [Source:ZFIN;Acc:ZDB-GENE-081028-45]
18. crfb12 ENSDARG00000052413 47 0.999 - 0.999 - - - - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
19. si:ch73-83c10.2 si:ch73-83c10.2 22 0.999 - 0.999 - - - - - - -
20. MSLNL MSLNL 41 0.999 - 0.999 - - - - - - -
21. FP236276.2 FP236276.2 43 0.998 - 0.998 - - - - - - -
22. bbs4 ENSDARG00000063522 247 0.998 - 0.998 - - - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
23. CR759791.1 ENSDARG00000088591 160 0.998 - 0.998 - - - - - - - beta-1,3-galactosyltransferase 2-like [Source:NCBI gene;Acc:100537407]
24. uroc1 ENSDARG00000070394 357 0.998 - 0.998 - - - - - - - urocanate hydratase 1 [Source:ZFIN;Acc:ZDB-GENE-081022-148]
25. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 0.997 - 0.997 - - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
26. ttc9c ENSDARG00000007025 463 0.997 - 0.997 - - - - - - - tetratricopeptide repeat domain 9C [Source:ZFIN;Acc:ZDB-GENE-040426-1053]
27. gpr112b gpr112b 28 0.997 - 0.997 - - - - - - -
28. cnstb ENSDARG00000042759 105 0.997 - 0.997 - - - - - - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
29. ch25h ENSDARG00000045190 35 0.997 - 0.997 - - - - - - - cholesterol 25-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-041212-81]
30. drd3 ENSDARG00000032131, ENSDARG00000110679 25 0.997 - 0.997 - - - - - - - dopamine receptor D3 [Source:ZFIN;Acc:ZDB-GENE-021119-1]
31. BX321875.3 ENSDARG00000112569 24 0.997 - 0.997 - - - - - - -
32. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.997 - 0.997 - - - - - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
33. med30 ENSDARG00000101115 133 0.996 - 0.996 - - - - - - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
34. esm1 ENSDARG00000104370 186 0.996 - 0.996 - - - - - - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
35. azi1_1 azi1_1 1375 0.996 - 0.996 - - - - - - -
36. cx35b cx35b 63 0.996 0.996 - - - - - - - -
37. C18H15orf61 C18H15orf61 104 0.996 - 0.996 - - - - - - -
38. pou4f1 ENSDARG00000005559 821 0.995 - 0.995 - - - - - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
39. katnb1 ENSDARG00000005456, ENSDARG00000110223, ENSDARG00000116933 630 0.994 - 0.994 - - - - - - - katanin p80 (WD repeat containing) subunit B 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1954]
40. epb41l4a ENSDARG00000040087 1013 0.994 - 0.994 - - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
41. cry5 ENSDARG00000019498 90 0.994 - 0.994 - - - - - - - cryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
42. LRIF1_1 LRIF1_1 228 0.993 - 0.993 - - - - - - -
43. si:ch211-149b19.3 ENSDARG00000076011 306 0.993 - 0.993 - - - - - - - si:ch211-149b19.3 [Source:ZFIN;Acc:ZDB-GENE-110411-37]
44. exo1 ENSDARG00000056832, ENSDARG00000112534 186 0.993 - 0.993 - - - - - - - exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2828]
45. gna14 ENSDARG00000035178 618 0.993 - 0.993 - - - - - - - guanine nucleotide binding protein (G protein), alpha 14 [Source:ZFIN;Acc:ZDB-GENE-040808-7]
46. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 0.993 - 0.993 - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
47. cdkn2c ENSDARG00000057610 179 0.993 - 0.993 - - - - - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
48. matk ENSDARG00000074670 225 0.992 - 0.992 - - - - - - - megakaryocyte-associated tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070705-183]
49. si:ch211-11n16.2 ENSDARG00000099779 417 0.992 - 0.992 - - - - - - - si:ch211-11n16.2 [Source:ZFIN;Acc:ZDB-GENE-041008-77]
50. asmtl ENSDARG00000021433, ENSDARG00000114151 550 0.992 - 0.992 - - - - - - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
51. rab34b ENSDARG00000010977 590 0.992 - 0.992 - - - - - - - RAB34, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-091118-61]
52. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 0.992 - 0.992 - - - - - - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]
53. crcp ENSDARG00000069373 730 0.991 - 0.991 - - - - - - - calcitonin gene-related peptide-receptor component protein [Source:ZFIN;Acc:ZDB-GENE-060825-150]
54. ctdspla ENSDARG00000071673 1447 0.991 - 0.991 - - - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
55. il4r il4r 75 0.991 - 0.991 - - - - - - -
56. CU861453.1 ENSDARG00000097192 271 0.991 - 0.991 - - - - - - -
57. AL929007.2 AL929007.2 117 0.99 - 0.990 - - - - - - -
58. fam83fb ENSDARG00000104188 79 0.99 - 0.990 - - - - - - - family with sequence similarity 83, member Fb [Source:ZFIN;Acc:ZDB-GENE-041114-194]
59. casp7 ENSDARG00000091836 657 0.99 - 0.990 - - - - - - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
60. qtrtd1 243 0.99 - 0.990 - - - - - - - queuine tRNA-ribosyltransferase domain containing 1, transcript variant X1
61. C5H11orf1 C5H11orf1 78 0.989 - 0.989 - - - - - - -
62. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 0.989 - 0.989 - - - - - - - tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
63. PHF13 ENSDARG00000102023 1102 0.989 - 0.989 - - - - - - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
64. TNFRSF14_3 TNFRSF14_3 135 0.989 - 0.989 - - - - - - -
65. TRIM35_10 TRIM35_10 484 0.989 - 0.989 - - - - - - -
66. lmf2a ENSDARG00000078094 352 0.989 - 0.989 - - - - - - - lipase maturation factor 2a [Source:ZFIN;Acc:ZDB-GENE-080723-47]
67. LUZP1 ENSDARG00000075556 55 0.988 - 0.988 - - - - - - - leucine zipper protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-90]
68. ARHGAP32_1 ARHGAP32_1 124 0.988 - 0.988 - - - - - - -
69. zgc:174275 ENSDARG00000099845 172 0.987 - 0.987 - - - - - - - zgc:174275 [Source:ZFIN;Acc:ZDB-GENE-080305-5]
70. olfml3b ENSDARG00000062171 264 0.986 - 0.986 - - - - - - - olfactomedin-like 3b [Source:ZFIN;Acc:ZDB-GENE-050302-161]
71. si:ch73-138e16.8 175 0.986 - 0.986 - - - - - - - si:ch73-138e16.8
72. C20H6orf58_1 C20H6orf58_1 216 0.985 - 0.985 - - - - - - -
73. sumf1 ENSDARG00000044203, ENSDARG00000114368 245 0.985 - 0.985 - - - - - - - sulfatase modifying factor 1 [Source:ZFIN;Acc:ZDB-GENE-060421-3113]
74. tgm1 ENSDARG00000017799 442 0.985 - 0.985 - - - - - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
75. skiv2l ENSDARG00000062206 268 0.985 - 0.985 - - - - - - - SKI2 homolog, superkiller viralicidic activity 2-like [Source:ZFIN;Acc:ZDB-GENE-010430-5]
76. itgb1b.2 ENSDARG00000022689 523 0.984 - 0.984 - - - - - - - integrin, beta 1b.2 [Source:ZFIN;Acc:ZDB-GENE-040426-2598]
77. vars2 ENSDARG00000056717 283 0.984 - 0.984 - - - - - - - valyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-575]
78. WNT7A WNT7A 320 0.984 - 0.984 - - - - - - -
79. tdrd3 ENSDARG00000025421 633 0.983 - 0.983 - - - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
80. fbxo25 ENSDARG00000075172 153 0.983 - 0.983 - - - - - - - F-box protein 25 [Source:ZFIN;Acc:ZDB-GENE-040801-19]
81. pargl ENSDARG00000101719 155 0.982 - 0.982 - - - - - - - poly (ADP-ribose) glycohydrolase, like [Source:ZFIN;Acc:ZDB-GENE-090313-286]
82. zic5 ENSDARG00000016022 1034 0.982 - 0.982 - - - - - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
83. CT025914.2 CT025914.2 53 0.982 - 0.982 - - - - - - -
84. zdhhc6 ENSDARG00000075721 1494 0.98 - 0.980 - - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
85. NRBP2 NRBP2 127 0.979 - 0.979 - - - - - - -
86. mlst8 ENSDARG00000003167, ENSDARG00000116280 541 0.978 - 0.978 - - - - - - - MTOR associated protein, LST8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6176]
87. sema5a ENSDARG00000058821 333 0.978 - 0.978 - - - - - - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8969]
88. lhfp 700 0.978 - 0.978 - - - - - - - lipoma HMGIC fusion partner
89. si:dkey-57k17.1 ENSDARG00000104697 442 0.977 - 0.977 - - - - - - - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
90. znrd1 ENSDARG00000036070 684 0.976 - 0.976 - - - - - - - zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]
91. rac3b ENSDARG00000020795 1523 0.976 - 0.976 - - - - - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
92. si:ch211-120e1.6 si:ch211-120e1.6 292 0.975 - 0.975 - - - - - - -
93. dtymk ENSDARG00000052103 239 0.975 - 0.975 - - - - - - - deoxythymidylate kinase (thymidylate kinase) [Source:ZFIN;Acc:ZDB-GENE-990603-11]
94. nfyal ENSDARG00000001621 521 0.975 - 0.975 - - - - - - - nuclear transcription factor Y, alpha, like [Source:ZFIN;Acc:ZDB-GENE-040718-491]
95. amn ENSDARG00000062947 36 0.975 - 0.975 - - - - - - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
96. hdac6 ENSDARG00000008384 144 0.974 - 0.974 - - - - - - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
97. surf1 ENSDARG00000003592 551 0.973 - 0.973 - - - - - - - surfeit 1 [Source:ZFIN;Acc:ZDB-GENE-041108-2]
98. chsy3 ENSDARG00000069472 271 0.973 - 0.973 - - - - - - - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
99. zbtb4 ENSDARG00000105255 362 0.972 - 0.972 - - - - - - - zinc finger and BTB domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-100318-5]
100. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 0.972 - 0.972 - - - - - - - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]

There are 963 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA