Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for shoc2

Gene Name Gene ID Reads Annotation
shoc2 ENSDARG00000040853, ENSDARG00000112058, ENSDARG00000116564 2264 SHOC2 leucine-rich repeat scaffold protein [Source:ZFIN;Acc:ZDB-GENE-050208-523]










Genes with expression patterns similar to shoc2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. shoc2 ENSDARG00000040853, ENSDARG00000112058, ENSDARG00000116564 2264 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SHOC2 leucine-rich repeat scaffold protein [Source:ZFIN;Acc:ZDB-GENE-050208-523]
2. tshz3a ENSDARG00000087394 2455 1.684 - 0.853 - - - 0.831 - - - teashirt zinc finger homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-100322-1]
3. rnaset2 ENSDARG00000036282 2226 1.543 - 0.731 - - - 0.812 - - - ribonuclease T2 [Source:ZFIN;Acc:ZDB-GENE-030131-2513]
4. rnf14 ENSDARG00000043905 862 1.539 - 0.737 - - - - - 0.802 - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
5. trim71 ENSDARG00000075593 2750 1.528 - 0.762 - - - 0.766 - - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
6. im:7140055 ENSDARG00000092181 450 1.518 0.736 0.782 - - - - - - - im:7140055 [Source:ZFIN;Acc:ZDB-GENE-041111-101]
7. pmaip1 ENSDARG00000089307 236 1.512 - 0.742 - - - 0.770 - - - phorbol-12-myristate-13-acetate-induced protein 1 [Source:ZFIN;Acc:ZDB-GENE-070119-3]
8. arhgef7b ENSDARG00000073848 1249 1.502 - 0.726 - - - 0.776 - - - Rho guanine nucleotide exchange factor (GEF) 7b [Source:ZFIN;Acc:ZDB-GENE-041212-49]
9. hsbp1b ENSDARG00000041921 6170 1.492 - 0.702 - - - 0.790 - - - heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
10. PVRL4 1691 1.481 0.768 0.713 - - - - - - - poliovirus receptor-related 4
11. adnp2b ENSDARG00000028431 4683 1.47 - 0.740 - - - 0.730 - - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
12. trib3 ENSDARG00000016200 1231 1.469 - 0.714 - - - 0.755 - - - tribbles pseudokinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2609]
13. gna11a ENSDARG00000010002, ENSDARG00000111208 1303 1.467 - 0.754 - - - 0.713 - - - guanine nucleotide binding protein (G protein), alpha 11a (Gq class) [Source:ZFIN;Acc:ZDB-GENE-050208-597]
14. adamtsl7 ENSDARG00000055439 575 1.456 0.705 - - - - 0.751 - - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
15. prkcbp1l ENSDARG00000011932 2714 1.45 - 0.706 - - - 0.744 - - - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
16. spryd7b ENSDARG00000069485, ENSDARG00000114214, ENSDARG00000115747 488 1.446 - 0.715 - - - 0.731 - - - SPRY domain containing 7b [Source:ZFIN;Acc:ZDB-GENE-040426-1634]
17. ppp4ca ENSDARG00000070570 8395 1.443 - 0.727 - - - 0.716 - - - protein phosphatase 4, catalytic subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-4433]
18. xpnpep1 ENSDARG00000029011 1723 1.425 - 0.714 - - - 0.711 - - - X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
19. myo10 ENSDARG00000017004 2191 1 - - - - - - 1.000 - - myosin X [Source:ZFIN;Acc:ZDB-GENE-070912-277]
20. spen ENSDARG00000074245, ENSDARG00000116696 3054 1 - - - - - - 1.000 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
21. wu:fb12e11 wu:fb12e11 2332 1 - - - - - - 1.000 - -
22. CRELD1 794 1 - - - - - - 1.000 - - cysteine rich with EGF like domains 1
23. mid2 ENSDARG00000034871 1001 1 - - - - - - 1.000 - - midline 2 [Source:ZFIN;Acc:ZDB-GENE-090220-1]
24. mrpl13 ENSDARG00000056903 2768 1 - - - - - - 1.000 - - mitochondrial ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-050522-167]
25. MAST1_1 MAST1_1 1595 1 - - - - - - 1.000 - -
26. rbfox2 ENSDARG00000052182 6621 1 - - - - - - 1.000 - - RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]
27. eif5 ENSDARG00000003681 7986 1 - - - - - - 1.000 - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
28. TMEM45A ENSDARG00000070743 1669 1 - - - - - - 1.000 - - transmembrane protein 45a [Source:ZFIN;Acc:ZDB-GENE-050522-34]
29. sipa1l2 ENSDARG00000061640 4545 1 - - - - - - 1.000 - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
30. map3k1 ENSDARG00000098405 3043 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
31. eif2d ENSDARG00000012929 2624 1 - - - - - - 1.000 - - eukaryotic translation initiation factor 2D [Source:ZFIN;Acc:ZDB-GENE-040426-1226]
32. TUB ENSDARG00000062165, ENSDARG00000111083 871 1 - - - - - - 1.000 - - tubby bipartite transcription factor [Source:ZFIN;Acc:ZDB-GENE-121009-1]
33. m6pr ENSDARG00000018432 1411 1 - - - - - - 1.000 - - mannose-6-phosphate receptor (cation dependent) [Source:ZFIN;Acc:ZDB-GENE-040426-2285]
34. zgc:73340 823 1 - - - - - - 1.000 - - zgc:73340
35. oxr1b ENSDARG00000063310 929 1 - - - - - - 1.000 - - oxidation resistance 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2438]
36. cd2bp2 ENSDARG00000027357, ENSDARG00000115040, ENSDARG00000115297 1808 1 - - - - - - 1.000 - - CD2 (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-925]
37. dcun1d1 ENSDARG00000099642 2043 1 - - - - - - 1.000 - - DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5443]
38. calb2b ENSDARG00000036344 2417 0.999 - - - - - - 0.999 - - calbindin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1668]
39. lamb2 ENSDARG00000002084 3265 0.999 - - - - - - 0.999 - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
40. aldh9a1b ENSDARG00000037061 2638 0.999 - - - - - - 0.999 - - aldehyde dehydrogenase 9 family, member A1b [Source:ZFIN;Acc:ZDB-GENE-040120-5]
41. mtp_1 3298 0.999 - - - - - - 0.999 - - microsomal triglyceride transfer protein
42. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 0.998 - - - - - - 0.998 - - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
43. pak2a ENSDARG00000068177 8931 0.998 - - - - - - 0.998 - - p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
44. psmd14 ENSDARG00000063100 15711 0.998 - - - - - - 0.998 - - proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
45. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 0.997 - - - - - - 0.997 - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
46. thrap3b ENSDARG00000098228 4396 0.997 - - - - - - 0.997 - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
47. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 0.997 - - - - - - 0.997 - - high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
48. gpt2l ENSDARG00000019541 3397 0.997 - - - - - - 0.997 - - glutamic pyruvate transaminase (alanine aminotransferase) 2, like [Source:ZFIN;Acc:ZDB-GENE-050302-11]
49. mcm5 ENSDARG00000019507 6407 0.997 - - - - - - 0.997 - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
50. hoxc6a ENSDARG00000070343 2839 0.997 - - - - - - 0.997 - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
51. psmb3 ENSDARG00000013938 10744 0.997 - - - - - - 0.997 - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
52. elavl1 11672 0.997 - - - - - - 0.997 - - ELAV like RNA binding protein 1, transcript variant X3
53. ddost ENSDARG00000037318 10904 0.996 - - - - - - 0.996 - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-040426-2147]
54. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 12826 0.996 - - - - - - 0.996 - - zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
55. ap3m1 ENSDARG00000029928 3772 0.994 - - - - - - 0.994 - - adaptor related protein complex 3 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-021015-2]
56. hnrnph1l ENSDARG00000005551 8727 0.993 - - - - - - 0.993 - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
57. PLCXD1_4 PLCXD1_4 3673 0.993 - - - - - - 0.993 - -
58. MYOM2_1 MYOM2_1 4054 0.993 - - - - - - 0.993 - -
59. s100v2 ENSDARG00000070702 8645 0.993 - - - - - - 0.993 - - S100 calcium binding protein V2 [Source:ZFIN;Acc:ZDB-GENE-030131-8909]
60. IGFN1 IGFN1 5030 0.993 - - - - - - 0.993 - -
61. cox7a2a ENSDARG00000053217 12564 0.993 - - - - - - 0.993 - - cytochrome c oxidase subunit 7A2a [Source:ZFIN;Acc:ZDB-GENE-050522-153]
62. marcksl1b ENSDARG00000035715 37390 0.992 - - - - - - 0.992 - - MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
63. mdh1a mdh1a 11035 0.991 - - - - - - 0.991 - -
64. AL929007.1 AL929007.1 3649 0.991 - - - - - - 0.991 - -
65. vtna ENSDARG00000055388 2635 0.991 - - - - - - 0.991 - - vitronectin a [Source:ZFIN;Acc:ZDB-GENE-050522-440]
66. ank1 ank1 5209 0.99 - - - - - - 0.990 - -
67. nucks1a ENSDARG00000078473 28285 0.989 - - - - - - 0.989 - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
68. rps11 ENSDARG00000053058 16233 0.989 - - - - - - 0.989 - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
69. khdrbs1b ENSDARG00000070475 18157 0.988 - - - - - - 0.988 - - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
70. gart ENSDARG00000101089 6062 0.985 - - - - - - 0.985 - - phosphoribosylglycinamide formyltransferase [Source:ZFIN;Acc:ZDB-GENE-000616-14]
71. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 0.984 - - - - - - 0.984 - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
72. zgc:113232 ENSDARG00000040118, ENSDARG00000116977 5865 0.981 - - - - - - 0.981 - - zgc:113232 [Source:ZFIN;Acc:ZDB-GENE-050327-86]
73. eif1b ENSDARG00000012688 34711 0.973 - - - - - - 0.973 - - eukaryotic translation initiation factor 1B [Source:ZFIN;Acc:ZDB-GENE-030131-956]
74. pmp22a ENSDARG00000105223, ENSDARG00000115339 9849 0.96 - - - - - - 0.960 - - peripheral myelin protein 22a [Source:ZFIN;Acc:ZDB-GENE-030131-6757]
75. eef1g ENSDARG00000056119 52958 0.953 - - - - - - 0.953 - - eukaryotic translation elongation factor 1 gamma [Source:ZFIN;Acc:ZDB-GENE-020423-3]
76. calm3a_1 ENSDARG00000015050, ENSDARG00000100825 46072 0.945 - - - - - - 0.945 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
77. rpl17 ENSDARG00000057556 60281 0.905 - - - - - - 0.905 - - ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
78. si:dkey-193c22.2 ENSDARG00000076735 2791 0.899 - - - - - 0.899 - - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
79. cpeb3 ENSDARG00000060103 2367 0.893 - 0.893 - - - - - - - cytoplasmic polyadenylation element binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-090312-68]
80. rps7 ENSDARG00000042566 57650 0.884 - - - - - - 0.884 - - ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
81. rbms1a ENSDARG00000074023 2742 0.883 - 0.883 - - - - - - - RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]
82. CLDND1 CLDND1 155 0.881 - - - - - 0.881 - - -
83. ttc13 ENSDARG00000063242 1360 0.877 - - - - - 0.877 - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
84. gmfb ENSDARG00000028327 6522 0.875 - 0.875 - - - - - - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
85. grb10a ENSDARG00000002013 1349 0.874 - 0.874 - - - - - - - growth factor receptor-bound protein 10a [Source:ZFIN;Acc:ZDB-GENE-040822-32]
86. si:dkeyp-113d7.4 si:dkeyp-113d7.4 33767 0.874 - - - - - - 0.874 - -
87. map3k5 ENSDARG00000005416, ENSDARG00000114051 177 0.869 - - - - - 0.869 - - - mitogen-activated protein kinase kinase kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030827-3]
88. Mar-07 Mar-07 2926 0.865 - 0.865 - - - - - - -
89. ccsapb ENSDARG00000040085 784 0.862 - - - - - 0.862 - - - centriole, cilia and spindle-associated protein b [Source:ZFIN;Acc:ZDB-GENE-081107-51]
90. arl8a ENSDARG00000078686 4379 0.861 - - - - - - 0.861 - - ADP-ribosylation factor-like 8A [Source:ZFIN;Acc:ZDB-GENE-030131-5025]
91. mir130b 180 0.861 - - - - - 0.861 - - - microRNA 130b
92. CAMTA2 ENSDARG00000092799 1950 0.859 - - - - - 0.859 - - - calmodulin binding transcription activator 2 [Source:ZFIN;Acc:ZDB-GENE-090313-6]
93. kcnc4 ENSDARG00000061288, ENSDARG00000113894 95 0.857 - - - - - 0.857 - - - potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-773]
94. oaz1b ENSDARG00000104782 37623 0.855 - - - - - - 0.855 - - ornithine decarboxylase antizyme 1b [Source:ZFIN;Acc:ZDB-GENE-020731-5]
95. tmem167a ENSDARG00000035914 3319 0.853 - - - - - 0.853 - - - transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
96. paip2b ENSDARG00000008706 4255 0.851 - 0.851 - - - - - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
97. nt5c1bb ENSDARG00000033742 1248 0.849 - - - - - 0.849 - - - 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
98. N4BP2L1 N4BP2L1 573 0.846 - - - - - 0.846 - - -
99. si:dkey-18f7.2 si:dkey-18f7.2 895 0.843 - 0.843 - - - - - - -
100. tubgcp5 ENSDARG00000077442 507 0.84 - - - - - - - 0.840 - tubulin, gamma complex associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-050522-344]

There are 600 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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