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Results for shfm1

Gene Name Gene ID Reads Annotation
shfm1 7620 split hand/foot malformation (ectrodactyly) type 1










Genes with expression patterns similar to shfm1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. shfm1 7620 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 split hand/foot malformation (ectrodactyly) type 1
2. pl10 pl10 10795 3.399 - 0.700 - 0.971 - 0.755 - - 0.973
3. nipblb ENSDARG00000061052 6109 3.214 - 0.705 - 0.989 - - 0.772 0.748 - nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]
4. api5 ENSDARG00000033597 6655 2.678 - - 0.882 - - 0.806 - - 0.990 apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
5. CABZ01081490.1 ENSDARG00000111653 11892 2.459 - - 0.746 0.990 - 0.723 - - -
6. ube2e1 ENSDARG00000116649 10656 2.392 - 0.704 - - - 0.704 - - 0.984 ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
7. sltm ENSDARG00000052728 6234 2.28 - - 0.854 - 0.705 - 0.721 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
8. fdx1 ENSDARG00000056410, ENSDARG00000115831 3463 2.193 - 0.751 - - - 0.727 - 0.715 - ferredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-071015-2]
9. fam96b 2255 1.989 - - - 0.993 - - - - 0.996 family with sequence similarity 96, member B
10. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 1.986 - - - 0.991 - - - - 0.995 Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
11. ndrg3a ENSDARG00000013087 5581 1.98 - - - 0.988 - - - - 0.992 ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
12. sdhb ENSDARG00000075768 5493 1.973 - - - 0.984 - - - - 0.989 succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
13. scrt2 ENSDARG00000056175 4331 1.963 - - - 0.989 - - - - 0.974 scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
14. acap3a ENSDARG00000075990 9652 1.853 - - 0.871 - - - - - 0.982 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
15. EEF1E1 ENSDARG00000071774 3806 1.842 - - 0.852 0.990 - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
16. eif3m ENSDARG00000013931 8117 1.785 - 0.832 0.953 - - - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
17. clpp ENSDARG00000020679 2125 1.777 - 0.782 - - - - - - 0.995 caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-7860]
18. ube2v2 ENSDARG00000028198 23341 1.76 - - - 0.974 - - 0.786 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
19. inppl1a ENSDARG00000104222 6256 1.749 - - 0.765 0.984 - - - - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
20. rpa2 ENSDARG00000037188 4284 1.724 - - - 0.989 - - 0.735 - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
21. atp6v1c1a ENSDARG00000023967 4611 1.723 - - - 0.987 - 0.736 - - - ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
22. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.71 - 0.828 0.882 - - - - - - SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
23. ptpn21 ENSDARG00000062248 2010 1.709 - - - - - - - 0.715 0.994 protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
24. cers2b ENSDARG00000058992 5319 1.708 - 0.731 - - - - - - 0.977 ceramide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-110408-40]
25. RNF38 ENSDARG00000062055 3901 1.706 - - - - - 0.726 - - 0.980 ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
26. rbb4l ENSDARG00000015208 5542 1.702 - - - 0.992 - 0.710 - - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
27. seh1l ENSDARG00000004280 2915 1.698 - - - 0.991 - - - 0.707 - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
28. zcchc9 ENSDARG00000007531 1748 1.697 - - - - - - 0.701 - 0.996 zinc finger, CCHC domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-031030-9]
29. dlg5a ENSDARG00000074059 1834 1.693 - - - 0.988 - - - 0.705 - discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
30. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.687 - - - 0.986 - 0.701 - - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
31. nono ENSDARG00000020482, ENSDARG00000115783 12482 1.686 - 0.768 0.918 - - - - - - non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
32. banf1 ENSDARG00000037009 16466 1.685 - - - 0.975 0.710 - - - - barrier to autointegration factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6657]
33. mllt10 ENSDARG00000045401 7557 1.677 - - 0.901 - - 0.776 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
34. rnf121 ENSDARG00000060282 1809 1.676 - 0.836 0.840 - - - - - - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
35. uba1 ENSDARG00000037559 11579 1.663 - - - - - 0.715 - - 0.948 ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
36. kpna3 ENSDARG00000052641 5347 1.659 - 0.752 0.907 - - - - - - karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
37. sumo2b ENSDARG00000102741 18514 1.652 - - - - - - - 0.781 0.871 small ubiquitin-like modifier 2b [Source:ZFIN;Acc:ZDB-GENE-040801-7]
38. phf10 ENSDARG00000070084 1210 1.644 - - 0.860 - - - - 0.784 - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
39. CBFA2T3 ENSDARG00000079012 6799 1.64 - - - - - - - 0.708 0.932 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
40. RSF1_2 RSF1_2 1343 1.635 - - 0.846 - - - - 0.789 -
41. ek1 ENSDARG00000020080 742 1.628 - - 0.864 - - - - 0.764 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
42. acin1a ENSDARG00000054290 14023 1.618 - - 0.703 - - - - - 0.915 apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
43. g3bp1 ENSDARG00000017741 7622 1.616 - 0.766 - - - - - 0.850 - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
44. psmd11b ENSDARG00000005134 4242 1.616 - 0.847 0.769 - - - - - - proteasome 26S subunit, non-ATPase 11b [Source:ZFIN;Acc:ZDB-GENE-030131-984]
45. clasp2 ENSDARG00000020345 3382 1.614 - 0.701 0.913 - - - - - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
46. tial1 ENSDARG00000009525 1856 1.611 - - 0.865 - - - - 0.746 - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
47. tbl3 ENSDARG00000052344 1530 1.61 - - 0.853 - - - - 0.757 - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
48. prpf4bb ENSDARG00000040310 2260 1.601 - - - - - 0.794 - 0.807 - pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
49. ccdc85ca ENSDARG00000005232 3218 1.599 - - 0.841 - - 0.758 - - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
50. dnajc5ab ENSDARG00000004836 2923 1.594 - 0.735 0.859 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
51. dact2 ENSDARG00000056986 1121 1.578 - - 0.854 - - 0.724 - - - dishevelled-binding antagonist of beta-catenin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9975]
52. nap1l4b ENSDARG00000068868 3285 1.578 - - 0.847 - - 0.731 - - - nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
53. tgif1 ENSDARG00000059337 4020 1.577 - 0.721 - - - - - 0.856 - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
54. agpat3 ENSDARG00000036549 1093 1.575 - - 0.856 - - - - 0.719 - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
55. mri1 ENSDARG00000075754 2567 1.575 - 0.743 0.832 - - - - - - methylthioribose-1-phosphate isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-080204-109]
56. brap ENSDARG00000008560 821 1.573 - - 0.869 - - - 0.704 - - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
57. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.573 - - 0.856 - - - 0.717 - - asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
58. hes6 ENSDARG00000019335 4754 1.57 - - 0.837 - - - - 0.733 - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
59. kri1 ENSDARG00000075380 1463 1.569 - - 0.854 - - - - 0.715 - KRI1 homolog [Source:ZFIN;Acc:ZDB-GENE-040915-3]
60. ube4b ENSDARG00000037017 8012 1.569 - - 0.860 - - - 0.709 - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
61. lima1 lima1 4760 1.563 - - 0.845 - - - - 0.718 -
62. elavl1 11672 1.563 - - - - - 0.743 - 0.820 - ELAV like RNA binding protein 1, transcript variant X3
63. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.559 - 0.813 - - - - - 0.746 - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
64. C6H2orf40 C6H2orf40 4224 1.559 - 0.729 0.830 - - - - - -
65. rpl7l1 ENSDARG00000042864 3256 1.558 - - 0.839 - - - 0.719 - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
66. prp19 prp19 4804 1.555 - - - - - 0.749 - 0.806 -
67. fam46ba 4575 1.553 - 0.804 - - - - 0.749 - - family with sequence similarity 46, member Ba
68. nop56 ENSDARG00000012820 15231 1.544 - 0.780 - - - - - 0.764 - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
69. SCML2 ENSDARG00000012949 1310 1.544 - - - - - - 0.797 0.747 - Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
70. psmd13 ENSDARG00000016239 4229 1.542 - - 0.743 - - 0.799 - - - proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
71. sipa1l2 ENSDARG00000061640 4545 1.541 - - 0.828 - - 0.713 - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
72. CREBZF ENSDARG00000089787 4261 1.54 - - - - - 0.730 - 0.810 - CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
73. cd99l2 ENSDARG00000056722 5036 1.539 - 0.759 - - - - - 0.780 - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
74. CWC15 ENSDARG00000013382 8969 1.537 - 0.821 - - - 0.716 - - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
75. zgc:153675 ENSDARG00000071555 3769 1.537 - 0.809 - - - - 0.728 - - zgc:153675 [Source:ZFIN;Acc:ZDB-GENE-061013-567]
76. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.536 - - 0.766 - - - - 0.770 - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
77. eif4a3 ENSDARG00000102978 16162 1.534 - - - - - 0.750 - 0.784 - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
78. bcat2 ENSDARG00000054849 4317 1.532 - 0.716 0.816 - - - - - - branched chain amino-acid transaminase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-425]
79. tmx1 ENSDARG00000019487 1129 1.531 - - - - - - 0.788 0.743 - thioredoxin-related transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2327]
80. ccdc47 ENSDARG00000054362 5970 1.525 - 0.794 - - - - 0.731 - - coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]
81. stau2 ENSDARG00000026801, ENSDARG00000112268 5161 1.525 - 0.780 - - - - 0.745 - - staufen double-stranded RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-687]
82. ddx39ab ENSDARG00000015111 11619 1.524 - - - - - 0.705 - 0.819 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
83. kdm5c ENSDARG00000006124 4389 1.522 - - 0.747 - - 0.775 - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
84. khsrp ENSDARG00000026489 15738 1.522 - - - - - 0.778 - 0.744 - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
85. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.521 - 0.702 - - - - - 0.819 - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
86. SERBP1 SERBP1 9276 1.52 - 0.766 - - - 0.754 - - -
87. phc1 ENSDARG00000002971 924 1.517 - - - - - - 0.736 0.781 - polyhomeotic homolog 1 [Source:ZFIN;Acc:ZDB-GENE-081022-39]
88. seta ENSDARG00000031495 39977 1.516 - - - - - 0.716 - 0.800 - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
89. gpm6bb ENSDARG00000001676 2005 1.512 - - 0.773 - - - - 0.739 - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
90. clstn1 ENSDARG00000031720 5286 1.511 - - 0.784 - - - - 0.727 - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
91. rtf1 ENSDARG00000008947 6596 1.51 - - 0.730 - - 0.780 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
92. eif4h ENSDARG00000042252 6742 1.497 - - 0.722 - - - - 0.775 - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
93. pbx4 ENSDARG00000052150 35676 1.494 - 0.756 - - - - - - 0.738 pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
94. col4a6 ENSDARG00000052061 8636 1.488 - 0.786 - - - - 0.702 - - collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
95. ptenb ENSDARG00000056623 5783 1.484 - - - - - 0.757 0.727 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
96. nr2f2 ENSDARG00000040926 5213 1.482 - - - - - 0.715 - 0.767 - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
97. myef2 ENSDARG00000059398 6050 1.48 - 0.754 - - - 0.726 - - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
98. slmo2 slmo2 5559 1.475 - 0.743 - - - 0.732 - - -
99. h2afvb ENSDARG00000116491 35692 1.469 - 0.732 - - - 0.737 - - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
100. arih2 ENSDARG00000012848 7087 1.469 - - 0.744 - - - 0.725 - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]

There are 999 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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