Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for she

Gene Name Gene ID Reads Annotation
she ENSDARG00000087956 941 Src homology 2 domain containing E [Source:ZFIN;Acc:ZDB-GENE-090915-6]










Genes with expression patterns similar to she

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. she ENSDARG00000087956 941 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Src homology 2 domain containing E [Source:ZFIN;Acc:ZDB-GENE-090915-6]
2. CABZ01018247.1 CABZ01018247.1 609 3.033 0.716 0.706 - - - 0.821 0.790 - -
3. prcp ENSDARG00000037883 473 2.409 - 0.752 - - - 0.804 0.853 - - prolylcarboxypeptidase (angiotensinase C) [Source:ZFIN;Acc:ZDB-GENE-040718-447]
4. il13ra2 ENSDARG00000039436, ENSDARG00000111925 286 2.347 - 0.732 - - - 0.793 0.822 - - interleukin 13 receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030521-10]
5. AEBP1 ENSDARG00000091726 1431 2.173 - 0.725 - - - 0.708 0.740 - - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
6. fli1a ENSDARG00000054632 330 1.734 - - - - - 0.884 0.850 - - Fli-1 proto-oncogene, ETS transcription factor a [Source:ZFIN;Acc:ZDB-GENE-980526-426]
7. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 1.73 - - - - - 0.893 0.837 - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
8. mrc1a ENSDARG00000102100 1260 1.714 - - - - - 0.914 0.800 - - mannose receptor, C type 1a [Source:ZFIN;Acc:ZDB-GENE-090915-4]
9. vsg1 1870 1.69 - - - - - 0.878 0.812 - - vessel-specific 1
10. tnfaip2b ENSDARG00000058160 622 1.687 - 0.888 - - - 0.799 - - - tumor necrosis factor, alpha-induced protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-56]
11. shank3b ENSDARG00000063054 148 1.683 - 0.812 - - - - 0.871 - - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
12. stab1 ENSDARG00000076484 717 1.682 - 0.828 - - - - 0.854 - - stabilin 1 [Source:ZFIN;Acc:ZDB-GENE-050208-554]
13. clec14a ENSDARG00000103533 718 1.673 - - - - - 0.784 0.889 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
14. foxc1a ENSDARG00000091481 1059 1.659 - - - - - 0.841 0.818 - - forkhead box C1a [Source:ZFIN;Acc:ZDB-GENE-010302-1]
15. gpr182 ENSDARG00000036616 455 1.649 - - - - - 0.939 0.710 - - G protein-coupled receptor 182 [Source:ZFIN;Acc:ZDB-GENE-030131-2361]
16. smtnl ENSDARG00000055632, ENSDARG00000109489 788 1.631 - 0.757 - - - - 0.874 - - smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]
17. tspan4 tspan4 692 1.615 - 0.831 - - - - 0.784 - -
18. lmo2 ENSDARG00000095019 1098 1.614 - - - - - 0.712 0.902 - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
19. fbxo8 ENSDARG00000007477 603 1.613 - 0.799 - - - - 0.814 - - F-box protein 8 [Source:ZFIN;Acc:ZDB-GENE-060421-7091]
20. hbae1 14666 1.61 0.773 0.837 - - - - - - - hemoglobin, alpha embryonic 1
21. cyp1a ENSDARG00000098315 273 1.61 - 0.833 - - - - 0.777 - - cytochrome P450, family 1, subfamily A [Source:ZFIN;Acc:ZDB-GENE-011219-1]
22. myct1 myct1 217 1.599 - 0.852 - - - 0.747 - - -
23. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 1.596 0.829 0.767 - - - - - - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
24. slc20a1a ENSDARG00000020114, ENSDARG00000113616 503 1.581 - 0.839 - - - - 0.742 - - solute carrier family 20, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2217]
25. sox18 ENSDARG00000058598 678 1.567 - - - - - 0.712 0.855 - - SRY (sex determining region Y)-box 18 [Source:ZFIN;Acc:ZDB-GENE-080725-1]
26. rreb1b ENSDARG00000042652 2731 1.563 - 0.803 - - - - 0.760 - - ras responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-070912-273]
27. nmd3 ENSDARG00000015676 303 1.558 - 0.793 - - - - 0.765 - - NMD3 ribosome export adaptor [Source:ZFIN;Acc:ZDB-GENE-050320-149]
28. MRPL21 ENSDARG00000003846 3244 1.554 - 0.824 - - - - 0.730 - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
29. si:dkey-261h17.1 ENSDARG00000095268 11403 1.552 - - - - - 0.772 0.780 - - si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]
30. LSM5 ENSDARG00000071573 371 1.541 - 0.757 - - - - 0.784 - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
31. stab2 ENSDARG00000045748, ENSDARG00000111479 2952 1.526 - - - - - 0.752 0.774 - - stabilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-336]
32. acss2 ENSDARG00000037781, ENSDARG00000112371 3100 1.524 - 0.816 - - - - 0.708 - - acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
33. pxk ENSDARG00000063195 851 1.521 - 0.768 - - - - 0.753 - - PX domain containing serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050208-393]
34. si:ch73-61d6.3 ENSDARG00000057826 274 1.518 - 0.740 - - - - 0.778 - - si:ch73-61d6.3 [Source:ZFIN;Acc:ZDB-GENE-091204-109]
35. zgc:91890 ENSDARG00000018980 198 1.514 - 0.705 - - - 0.809 - - - zgc:91890 [Source:ZFIN;Acc:ZDB-GENE-040704-21]
36. cd248b ENSDARG00000077938 2561 1.513 - 0.761 - - - - 0.752 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
37. WIZ WIZ 1188 1.506 0.773 - - - - - 0.733 - -
38. ptpn11b ENSDARG00000012340, ENSDARG00000114232 604 1.503 - 0.793 - - - - 0.710 - - protein tyrosine phosphatase, non-receptor type 11, b [Source:ZFIN;Acc:ZDB-GENE-040426-1158]
39. col11a1b ENSDARG00000009014 9998 1.502 - 0.725 - - - - 0.777 - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
40. cilp ENSDARG00000053362 1429 1.499 - 0.733 - - - - 0.766 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
41. fam174b ENSDARG00000068709 1171 1.496 - 0.709 - - - - 0.787 - - family with sequence similarity 174, member B [Source:ZFIN;Acc:ZDB-GENE-050419-78]
42. aplnrb ENSDARG00000036670 546 1.488 0.723 0.765 - - - - - - - apelin receptor b [Source:ZFIN;Acc:ZDB-GENE-050913-90]
43. cacng6b ENSDARG00000046079 258 1.487 0.737 - - - - - 0.750 - - calcium channel, voltage-dependent, gamma subunit 6b [Source:ZFIN;Acc:ZDB-GENE-100922-272]
44. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 1.479 - 0.708 - - - - 0.771 - - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
45. timm8a ENSDARG00000023672, ENSDARG00000114203 1075 1.475 - 0.757 - - - - 0.718 - - translocase of inner mitochondrial membrane 8 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-158]
46. aqp8a.1 ENSDARG00000045141, ENSDARG00000115150 830 1.464 - 0.739 - - - 0.725 - - - aquaporin 8a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040912-106]
47. ablim3 ENSDARG00000088168, ENSDARG00000112071, ENSDARG00000114074 573 1.45 - 0.708 - - - - 0.742 - - actin binding LIM protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1122]
48. agpat9 agpat9 938 1.448 - 0.733 - - - - 0.715 - -
49. ANKS3 ENSDARG00000038557 235 1.441 - 0.714 - - - 0.727 - - - ankyrin repeat and sterile alpha motif domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080204-51]
50. RASIP1 ENSDARG00000074829 113 1.438 - - - - - 0.701 0.737 - - Ras interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-120403-3]
51. CABZ01066957.1 CABZ01066957.1 161 1.436 - 0.717 - - - - 0.719 - -
52. pomp ENSDARG00000032296 4439 1.43 - 0.701 - - - - 0.729 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
53. tbl3 ENSDARG00000052344 1530 1.429 - 0.700 - - - - 0.729 - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
54. slc8a3 ENSDARG00000004931 338 1.411 - 0.709 - - - 0.702 - - - solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-050810-1]
55. klfd klfd 625 0.989 0.989 - - - - - - - -
56. c1qtnf9 ENSDARG00000058318, ENSDARG00000112904 1274 0.922 - 0.922 - - - - - - - C1q and TNF related 9 [Source:ZFIN;Acc:ZDB-GENE-080303-33]
57. DGKI 306 0.916 - 0.916 - - - - - - - diacylglycerol kinase, iota
58. CNOT4_1 CNOT4_1 697 0.914 - 0.914 - - - - - - -
59. CR847954.1 CR847954.1 127 0.904 - - - - - - 0.904 - -
60. dtwd1 ENSDARG00000111509 347 0.904 - 0.904 - - - - - - - DTW domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-23]
61. ap4s1 ENSDARG00000054220 346 0.901 - 0.901 - - - - - - - adaptor related protein complex 4 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-030616-404]
62. eif2ak2 ENSDARG00000068729 184 0.899 - 0.899 - - - - - - - eukaryotic translation initiation factor 2-alpha kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080422-1]
63. dph1 ENSDARG00000057973 191 0.899 - 0.899 - - - - - - - diphthamide biosynthesis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-411]
64. ednrb1a ednrb1a 1255 0.894 - - - - - - 0.894 - -
65. cdh5 ENSDARG00000075549 2288 0.889 - - - - - - 0.889 - - cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]
66. tnfaip8l3 ENSDARG00000088709 345 0.887 - - - - - 0.887 - - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
67. TMEM200C 172 0.883 0.883 - - - - - - - - transmembrane protein 200C
68. cldn15la ENSDARG00000016081 197 0.88 - - - - - 0.880 - - - claudin 15-like a [Source:ZFIN;Acc:ZDB-GENE-010328-12]
69. RFWD3 ENSDARG00000087752 167 0.877 - 0.877 - - - - - - - ring finger and WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-120529-1]
70. col4a1 ENSDARG00000055009 3083 0.877 - - - - - - 0.877 - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
71. si:ch211-85n16.3 ENSDARG00000096346 1095 0.874 - - - - - - 0.874 - - si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
72. gatad1 ENSDARG00000027612 1824 0.874 - - - - - - 0.874 - - GATA zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050629-1]
73. aatf ENSDARG00000025467, ENSDARG00000109548 796 0.873 - 0.873 - - - - - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
74. NDNF ENSDARG00000062936 7287 0.87 - - - - - - 0.870 - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
75. DLEU7 DLEU7 91 0.87 - 0.870 - - - - - - -
76. C1QBP ENSDARG00000039887 11186 0.87 - - - - - - 0.870 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
77. smyd5 ENSDARG00000071669 1194 0.869 - 0.869 - - - - - - - SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
78. rgs2 ENSDARG00000098761, ENSDARG00000109741 324 0.868 - - - - - - 0.868 - - regulator of G protein signaling 2 [Source:ZFIN;Acc:ZDB-GENE-040718-410]
79. grip2a ENSDARG00000087187 401 0.867 - 0.867 - - - - - - - glutamate receptor interacting protein 2a [Source:ZFIN;Acc:ZDB-GENE-081104-132]
80. mntb ENSDARG00000073988 1023 0.865 - 0.865 - - - - - - - MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
81. LRRC14 LRRC14 134 0.865 - - - - - 0.865 - - -
82. enkur ENSDARG00000031248 427 0.865 - - - - - 0.865 - - - enkurin, TRPC channel interacting protein [Source:ZFIN;Acc:ZDB-GENE-070718-1]
83. C10H21orf59 275 0.865 - 0.865 - - - - - - - c10h21orf59 homolog (H. sapiens)
84. dera ENSDARG00000005897 406 0.864 - 0.864 - - - - - - - deoxyribose-phosphate aldolase (putative) [Source:ZFIN;Acc:ZDB-GENE-041010-200]
85. pex12 ENSDARG00000035149 175 0.864 - 0.864 - - - - - - - peroxisomal biogenesis factor 12 [Source:ZFIN;Acc:ZDB-GENE-040426-929]
86. b4galt7 ENSDARG00000021899 546 0.858 - 0.858 - - - - - - - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
87. rnf216 ENSDARG00000087893 518 0.858 - 0.858 - - - - - - - ring finger protein 216 [Source:ZFIN;Acc:ZDB-GENE-081104-199]
88. HAP1 HAP1 481 0.858 - - - - - - 0.858 - -
89. ptprb ENSDARG00000076624 323 0.857 - 0.857 - - - - - - - protein tyrosine phosphatase, receptor type, b [Source:ZFIN;Acc:ZDB-GENE-101108-3]
90. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.856 - 0.856 - - - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
91. jdp2 jdp2 301 0.856 - 0.856 - - - - - - -
92. ms4a17a.11 ENSDARG00000094809 1086 0.856 - 0.856 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.11 [Source:ZFIN;Acc:ZDB-GENE-050417-157]
93. abcb10 ENSDARG00000061591 253 0.856 - - - - - 0.856 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 10 [Source:ZFIN;Acc:ZDB-GENE-040525-2]
94. baz2a ENSDARG00000102974 266 0.855 - 0.855 - - - - - - - bromodomain adjacent to zinc finger domain, 2A [Source:ZFIN;Acc:ZDB-GENE-041010-202]
95. gpn3 ENSDARG00000069525 499 0.852 - - - - - - 0.852 - - GPN-loop GTPase 3 [Source:ZFIN;Acc:ZDB-GENE-040724-141]
96. mmp15a ENSDARG00000051962 932 0.85 - 0.850 - - - - - - - matrix metallopeptidase 15a [Source:ZFIN;Acc:ZDB-GENE-070817-4]
97. ncf1 ENSDARG00000033735 83 0.85 - - - - - 0.850 - - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
98. HPDL ENSDARG00000113721 264 0.848 - - - - - - 0.848 - - 4-hydroxyphenylpyruvate dioxygenase like [Source:HGNC Symbol;Acc:HGNC:28242]
99. tenm1 ENSDARG00000003403 148 0.848 - 0.848 - - - - - - - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
100. CPXM1 CPXM1 201 0.848 - - - - - 0.848 - - -

There are 822 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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