Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for shda

Gene Name Gene ID Reads Annotation
shda ENSDARG00000094243 929 Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]










Genes with expression patterns similar to shda

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. shda ENSDARG00000094243 929 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
2. snx27b ENSDARG00000016977 2768 3.405 - 0.998 0.719 0.719 - - - 0.969 - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
3. nans nans 1365 2.632 - - - - - - 0.806 0.980 0.846
4. ddx42 ENSDARG00000037928 1659 1.954 - 0.999 - - - - - 0.955 - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
5. cdk8 ENSDARG00000016496, ENSDARG00000110333 3087 1.94 - 0.992 - - - - - 0.948 - cyclin-dependent kinase 8 [Source:ZFIN;Acc:ZDB-GENE-030903-2]
6. rapgef2 ENSDARG00000005482 2586 1.896 - 0.996 - - - - - 0.900 - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
7. galns ENSDARG00000051853, ENSDARG00000113387 347 1.746 0.747 0.999 - - - - - - - galactosamine (N-acetyl)-6-sulfatase [Source:ZFIN;Acc:ZDB-GENE-070112-1152]
8. znf839 ENSDARG00000076988 1032 1.721 - - - - - - 0.764 0.957 - zinc finger protein 839 [Source:ZFIN;Acc:ZDB-GENE-030131-4936]
9. tsc22d2 ENSDARG00000041839 1109 1.715 - 0.941 - - - 0.774 - - - TSC22 domain family 2 [Source:ZFIN;Acc:ZDB-GENE-031001-12]
10. FRRS1_1 FRRS1_1 831 1.711 - - - 0.734 - - - 0.977 -
11. nudt22 ENSDARG00000071671 411 1.707 - - - 0.727 - - - 0.980 - nudix (nucleoside diphosphate linked moiety X)-type motif 22 [Source:ZFIN;Acc:ZDB-GENE-041010-171]
12. mid1ip1l ENSDARG00000018145 2789 1.7 - 0.986 - - - - - - 0.714 MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
13. egfl6 ENSDARG00000045958 335 1.696 - - - 0.765 - - - 0.931 - EGF-like-domain, multiple 6 [Source:ZFIN;Acc:ZDB-GENE-040718-157]
14. sf3b2 ENSDARG00000018049 4675 1.696 - - - - - - 0.716 0.980 - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
15. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.689 - - - 0.768 - - - 0.921 - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
16. dact1 ENSDARG00000101635 1303 1.682 - - - - - - 0.704 0.978 - dishevelled-binding antagonist of beta-catenin 1 [Source:ZFIN;Acc:ZDB-GENE-040623-3]
17. fmoda ENSDARG00000044895 1835 1.668 - - - - - - - 0.930 0.738 fibromodulin a [Source:ZFIN;Acc:ZDB-GENE-041008-23]
18. st13 ENSDARG00000021973 7787 1.666 - 0.834 - - - - - 0.832 - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
19. syt5b ENSDARG00000011640 70 1.658 - - - - - - 0.859 - 0.799 synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
20. guf1 ENSDARG00000029088 231 1.648 - - - 0.896 - - 0.752 - - GUF1 homolog, GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-4289]
21. tmem50a ENSDARG00000015757 3244 1.64 - - - 0.721 - - - 0.919 - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
22. spg11 ENSDARG00000045968 542 1.637 0.707 - - - - - - 0.930 - spastic paraplegia 11 [Source:ZFIN;Acc:ZDB-GENE-101017-1]
23. si:dkey-4e7.3 ENSDARG00000042124 319 1.632 - - - - - - 0.841 - 0.791 si:dkey-4e7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-542]
24. mapk12a ENSDARG00000042021 1573 1.626 - - - - - - 0.753 0.873 - mitogen-activated protein kinase 12a [Source:ZFIN;Acc:ZDB-GENE-990415-257]
25. wnt7bb ENSDARG00000071107 1158 1.625 - - - - - 0.753 0.872 - - wingless-type MMTV integration site family, member 7Bb [Source:ZFIN;Acc:ZDB-GENE-081006-1]
26. pih1d1 ENSDARG00000037955 301 1.614 - - - 0.751 - - 0.863 - - PIH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-147]
27. nelfe ENSDARG00000004343 1647 1.61 - - - 0.821 - - 0.789 - - negative elongation factor complex member E [Source:ZFIN;Acc:ZDB-GENE-040718-69]
28. cyc1 ENSDARG00000038075 16699 1.601 - 0.783 - - - - - 0.818 - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
29. si:dkey-98p3.7 si:dkey-98p3.7 147 1.599 0.717 - - - - - 0.882 - -
30. capn7 ENSDARG00000102987 386 1.595 - - - 0.798 - - - - 0.797 calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
31. pex11a ENSDARG00000060707, ENSDARG00000111994 101 1.583 - - - - - - 0.804 - 0.779 peroxisomal biogenesis factor 11 alpha [Source:ZFIN;Acc:ZDB-GENE-050419-121]
32. crfb17 511 1.571 - - - - - - 0.783 - 0.788 cytokine receptor family member B17
33. limk1b ENSDARG00000003022 172 1.565 - - - 0.728 - - 0.837 - - LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
34. BCL10 ENSDARG00000077130 218 1.56 - - 0.707 - - - 0.853 - - B cell CLL/lymphoma 10 [Source:ZFIN;Acc:ZDB-GENE-100219-2]
35. wbscr16 wbscr16 791 1.553 - - - 0.703 - - 0.850 - -
36. lmx1a ENSDARG00000020354 111 1.538 - - - 0.804 - - - - 0.734 LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
37. tgm1l4 ENSDARG00000101407 800 1.527 0.700 - - - - - - - 0.827 transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
38. furinb ENSDARG00000070971 213 1.488 - - - - - - 0.774 - 0.714 furin (paired basic amino acid cleaving enzyme) b [Source:ZFIN;Acc:ZDB-GENE-040901-2]
39. GAS2L1 ENSDARG00000078803 315 1.482 - - - - - - 0.718 - 0.764 growth arrest-specific 2 like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-38]
40. zgc:113100 zgc:113100 647 1.481 - - - - - 0.750 0.731 - -
41. march5l ENSDARG00000028559 943 1.478 - - - - - 0.709 0.769 - - membrane-associated ring finger (C3HC4) 5, like [Source:ZFIN;Acc:ZDB-GENE-030131-4792]
42. CPLX1 CPLX1 386 1.463 - - - 0.733 - - 0.730 - -
43. nedd1 ENSDARG00000013472 209 1.46 - - - - - - 0.741 - 0.719 neural precursor cell expressed, developmentally down-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2906]
44. fam169aa ENSDARG00000059719, ENSDARG00000115913 474 1.456 - - - - - 0.745 0.711 - - family with sequence similarity 169, member Aa [Source:ZFIN;Acc:ZDB-GENE-060825-117]
45. aldh2.2 ENSDARG00000028087 303 1.421 - - 0.716 0.705 - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
46. tlk2 ENSDARG00000010779, ENSDARG00000112127 751 1 - 1.000 - - - - - - - tousled-like kinase 2 [Source:ZFIN;Acc:ZDB-GENE-060623-36]
47. esrrga ENSDARG00000004861 805 1 - 1.000 - - - - - - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
48. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1 - 1.000 - - - - - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
49. wu:fi42e03 ENSDARG00000070709 276 1 - 1.000 - - - - - - - wu:fi42e03 [Source:ZFIN;Acc:ZDB-GENE-030131-6284]
50. prosc 925 1 - 1.000 - - - - - - - pyridoxal phosphate binding protein, transcript variant X1
51. STARD4 ENSDARG00000102477 411 1 - 1.000 - - - - - - - StAR-related lipid transfer (START) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-168]
52. WDR81 ENSDARG00000079702 822 1 - 1.000 - - - - - - - WD repeat domain 81 [Source:ZFIN;Acc:ZDB-GENE-030131-3389]
53. SYTL1 ENSDARG00000070094 282 1 - 1.000 - - - - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
54. CAPN1_1 ENSDARG00000055338 288 1 - 1.000 - - - - - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
55. cnksr2b ENSDARG00000073707 664 1 - 1.000 - - - - - - - connector enhancer of kinase suppressor of Ras 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8048]
56. prune2 ENSDARG00000059423, ENSDARG00000116519 646 1 - 1.000 - - - - - - - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
57. angptl3 ENSDARG00000044365 574 1 - 1.000 - - - - - - - angiopoietin-like 3 [Source:ZFIN;Acc:ZDB-GENE-010817-3]
58. ctage5 530 1 - 1.000 - - - - - - - CTAGE family, member 5, transcript variant X8
59. trnau1apa ENSDARG00000101323 911 1 - 1.000 - - - - - - - tRNA selenocysteine 1 associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-502]
60. ahsa1l ahsa1l 2366 1 - 1.000 - - - - - - -
61. thbs4a ENSDARG00000102777 625 1 - 1.000 - - - - - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
62. nkain1 ENSDARG00000006859 1961 0.999 - 0.999 - - - - - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
63. sema4ba ENSDARG00000074414 1194 0.999 - 0.999 - - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba [Source:ZFIN;Acc:ZDB-GENE-070705-31]
64. ccnc ENSDARG00000009607 1240 0.999 - 0.999 - - - - - - - cyclin C [Source:ZFIN;Acc:ZDB-GENE-030131-7369]
65. zbtb44 ENSDARG00000061110, ENSDARG00000116194 1106 0.999 - 0.999 - - - - - - - zinc finger and BTB domain containing 44 [Source:ZFIN;Acc:ZDB-GENE-060526-201]
66. ppfibp2b ENSDARG00000029168 961 0.999 - 0.999 - - - - - - - PTPRF interacting protein, binding protein 2b (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-040718-54]
67. MTMR11 ENSDARG00000069755 917 0.999 - 0.999 - - - - - - - myotubularin related protein 11 [Source:ZFIN;Acc:ZDB-GENE-130530-726]
68. CABZ01079490.1 CABZ01079490.1 1808 0.999 - 0.999 - - - - - - -
69. dyrk1ab ENSDARG00000023814 1769 0.999 - 0.999 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
70. mrpl14 ENSDARG00000068886 1991 0.999 - 0.999 - - - - - - - mitochondrial ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-040426-1066]
71. eya2 ENSDARG00000018984 1768 0.999 - 0.999 - - - - - - - EYA transcriptional coactivator and phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-24]
72. aldh3a2b ENSDARG00000029381 2187 0.999 - 0.999 - - - - - - - aldehyde dehydrogenase 3 family, member A2b [Source:ZFIN;Acc:ZDB-GENE-040912-103]
73. gpd1c ENSDARG00000036942 869 0.999 - 0.999 - - - - - - - glycerol-3-phosphate dehydrogenase 1c [Source:ZFIN;Acc:ZDB-GENE-040426-2576]
74. xylt1 ENSDARG00000061248 2357 0.999 - 0.999 - - - - - - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
75. gfap ENSDARG00000025301 5584 0.999 - 0.999 - - - - - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
76. cks1b ENSDARG00000007971 2739 0.998 - 0.998 - - - - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
77. kpna5 ENSDARG00000042030 1643 0.998 - 0.998 - - - - - - - karyopherin alpha 5 (importin alpha 6) [Source:ZFIN;Acc:ZDB-GENE-050522-22]
78. samm50l ENSDARG00000039681 2465 0.998 - 0.998 - - - - - - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
79. setbp1 ENSDARG00000093799 4499 0.998 - 0.998 - - - - - - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
80. wu:fb54a03 wu:fb54a03 1722 0.998 - 0.998 - - - - - - -
81. nubp1 ENSDARG00000055472 1182 0.998 - 0.998 - - - - - - - nucleotide binding protein 1 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-050417-471]
82. rbm14b ENSDARG00000103834 1597 0.998 - 0.998 - - - - - - - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]
83. suv39h1b ENSDARG00000055753 1540 0.998 - 0.998 - - - - - - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
84. ccsapb ENSDARG00000040085 784 0.998 - 0.998 - - - - - - - centriole, cilia and spindle-associated protein b [Source:ZFIN;Acc:ZDB-GENE-081107-51]
85. sema3ab ENSDARG00000042210, ENSDARG00000110306 2178 0.998 - 0.998 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab [Source:ZFIN;Acc:ZDB-GENE-991209-6]
86. phldb1a ENSDARG00000061093 1637 0.998 - 0.998 - - - - - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
87. zgc:111974 zgc:111974 1386 0.998 - 0.998 - - - - - - -
88. bmpr1bb ENSDARG00000102742 1036 0.998 - 0.998 - - - - - - - bone morphogenetic protein receptor, type IBb [Source:ZFIN;Acc:ZDB-GENE-090610-1]
89. PPIC ENSDARG00000104343 662 0.998 - 0.998 - - - - - - - peptidylprolyl isomerase C [Source:ZFIN;Acc:ZDB-GENE-170217-1]
90. ube2f ENSDARG00000025754 1946 0.997 - 0.997 - - - - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
91. zc3h14 ENSDARG00000041402, ENSDARG00000109544 2477 0.997 - 0.997 - - - - - - - zinc finger CCCH-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-041014-257]
92. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 0.997 - 0.997 - - - - - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
93. si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 0.997 - 0.997 - - - - - - - si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]
94. tes ENSDARG00000051857 2020 0.997 - 0.997 - - - - - - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
95. prss12 ENSDARG00000061830 593 0.997 - 0.997 - - - - - - - serine protease 12 [Source:ZFIN;Acc:ZDB-GENE-090313-45]
96. tra2b ENSDARG00000002168 3218 0.996 - 0.996 - - - - - - - transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]
97. ponzr5 ENSDARG00000055046, ENSDARG00000115684 1093 0.996 - 0.996 - - - - - - - plac8 onzin related protein 5 [Source:ZFIN;Acc:ZDB-GENE-081104-325]
98. psmd11a ENSDARG00000060150 4529 0.996 - 0.996 - - - - - - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
99. kctd6b ENSDARG00000023703, ENSDARG00000116734 2621 0.996 - 0.996 - - - - - - - potassium channel tetramerization domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040718-14]
100. emc3 ENSDARG00000020607 3406 0.996 - 0.996 - - - - - - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]

There are 1224 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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