Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for shcbp1

Gene Name Gene ID Reads Annotation
shcbp1 ENSDARG00000102068, ENSDARG00000113939 423 SHC SH2-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5865]










Genes with expression patterns similar to shcbp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. shcbp1 ENSDARG00000102068, ENSDARG00000113939 423 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SHC SH2-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5865]
2. arhgap25 ENSDARG00000061784 112 1.745 - - 0.890 - - - 0.855 - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
3. rad54l ENSDARG00000018623 837 1.737 - 0.802 - - - 0.935 - - - RAD54 like [Source:ZFIN;Acc:ZDB-GENE-040426-968]
4. bmp6 ENSDARG00000015686 211 1.715 0.800 - 0.915 - - - - - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
5. THEG ENSDARG00000078644 121 1.648 - - 0.882 - - - 0.766 - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
6. thbs2b ENSDARG00000073810 870 1.627 - - 0.900 - - - 0.727 - - thrombospondin 2b [Source:ZFIN;Acc:ZDB-GENE-100623-1]
7. PPP1R35 ENSDARG00000068916 94 1.615 - - 0.805 - - - 0.810 - - protein phosphatase 1, regulatory subunit 35 [Source:ZFIN;Acc:ZDB-GENE-060825-232]
8. dgat1b ENSDARG00000054914 119 1.609 0.814 - - - - - 0.795 - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
9. limk1b ENSDARG00000003022 172 1.604 0.810 0.794 - - - - - - - LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
10. WDR48 WDR48 448 1.587 0.877 - - - - - 0.710 - -
11. adam28 ENSDARG00000035514, ENSDARG00000109685, ENSDARG00000111244 540 1.583 0.774 - - - - - 0.809 - - ADAM metallopeptidase domain 28 [Source:ZFIN;Acc:ZDB-GENE-060929-532]
12. sgsh ENSDARG00000032087 294 1.582 0.761 - 0.821 - - - - - - N-sulfoglucosamine sulfohydrolase (sulfamidase) [Source:ZFIN;Acc:ZDB-GENE-030131-4958]
13. aplnrb ENSDARG00000036670 546 1.579 - 0.772 - - - - 0.807 - - apelin receptor b [Source:ZFIN;Acc:ZDB-GENE-050913-90]
14. cacng6a ENSDARG00000036457 344 1.579 - - 0.751 - - - 0.828 - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
15. erbb3a ENSDARG00000006202 903 1.576 - - 0.802 - - - 0.774 - - erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]
16. senp6a ENSDARG00000102923 908 1.537 0.836 - - - - - 0.701 - - SUMO specific peptidase 6a [Source:ZFIN;Acc:ZDB-GENE-080204-25]
17. podxl ENSDARG00000031228 1744 1.536 - 0.785 - - - 0.751 - - - podocalyxin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2805]
18. swt1 ENSDARG00000094010 472 1.536 - - 0.726 - - - 0.810 - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
19. si:dkey-10g2.5 si:dkey-10g2.5 72 1.534 0.811 - - - - 0.723 - - -
20. clip1a ENSDARG00000078722 677 1.517 0.790 - - - - - 0.727 - - CAP-GLY domain containing linker protein 1a [Source:ZFIN;Acc:ZDB-GENE-060526-282]
21. mcmbp ENSDARG00000055314 731 1.509 - 0.789 0.720 - - - - - - minichromosome maintenance complex binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9676]
22. MLLT1 MLLT1 349 1.505 - 0.701 - - - - 0.804 - -
23. eno1b ENSDARG00000013750 63 1.502 - 0.726 - - - - 0.776 - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
24. CR478286.1_1 CR478286.1_1 306 1.465 - - 0.731 - - - 0.734 - -
25. CABZ01078889.1 CABZ01078889.1 911 1.452 - 0.745 - - - - - 0.707 -
26. exosc8 ENSDARG00000068755 951 1.44 - - - - - - 0.720 0.720 - exosome component 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1736]
27. tsen34 ENSDARG00000061370, ENSDARG00000115749 814 1.439 0.726 - 0.713 - - - - - - TSEN34 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050419-115]
28. slc26a11 ENSDARG00000043021 157 0.959 0.959 - - - - - - - - solute carrier family 26 (anion exchanger), member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5349]
29. glb1 ENSDARG00000036415 80 0.929 0.929 - - - - - - - - galactosidase, beta 1 [Source:ZFIN;Acc:ZDB-GENE-050410-9]
30. pigc ENSDARG00000009113 253 0.925 0.925 - - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class C [Source:ZFIN;Acc:ZDB-GENE-030131-2714]
31. CU459152.1 CU459152.1 407 0.923 - - 0.923 - - - - - -
32. wu:fj08f03 wu:fj08f03 1337 0.921 - - 0.921 - - - - - -
33. BX901915.1 ENSDARG00000109857 195 0.92 - - - - - - 0.920 - -
34. CABZ01022254.1 CABZ01022254.1 9 0.919 - - 0.919 - - - - - -
35. SVEP1 ENSDARG00000013526 16 0.919 - - 0.919 - - - - - - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110726-1]
36. si:ch73-27e22.3 ENSDARG00000077263 10 0.919 - - 0.919 - - - - - - si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
37. ngfrb ENSDARG00000089223, ENSDARG00000115390 41 0.919 - - 0.919 - - - - - - nerve growth factor receptor b [Source:ZFIN;Acc:ZDB-GENE-070606-2]
38. BX548021.2_1 BX548021.2_1 164 0.919 - - 0.919 - - - - - -
39. cdc42ep2 ENSDARG00000053959 32 0.919 - - 0.919 - - - - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
40. asic1b ENSDARG00000101866 61 0.918 - - 0.918 - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
41. CABZ01027547.1 CABZ01027547.1 128 0.918 - - 0.918 - - - - - -
42. si:dkey-164n2.1 47 0.918 - - 0.918 - - - - - - si:dkey-164n2.1, transcript variant X1
43. si:ch211-263m18.4 ENSDARG00000093353 27 0.918 - - 0.918 - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
44. dhdhl ENSDARG00000028336 844 0.918 0.918 - - - - - - - - dihydrodiol dehydrogenase (dimeric), like [Source:ZFIN;Acc:ZDB-GENE-040426-2180]
45. gcnt3 ENSDARG00000060471 37 0.914 - - 0.914 - - - - - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
46. ZNF337_20 ZNF337_20 65 0.914 - - 0.914 - - - - - -
47. si:dkey-24i24.3 ENSDARG00000088452 27 0.914 - - 0.914 - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
48. alkbh5 ENSDARG00000063003 185 0.913 - 0.913 - - - - - - - alkB homolog 5, RNA demethylase [Source:ZFIN;Acc:ZDB-GENE-061013-602]
49. irf1b ENSDARG00000043249 30 0.913 - - 0.913 - - - - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
50. PLD1 PLD1 158 0.909 - - 0.909 - - - - - -
51. zgc:162180 zgc:162180 31 0.908 - - 0.908 - - - - - -
52. C6H1orf159 C6H1orf159 406 0.908 - - 0.908 - - - - - -
53. TULP3 TULP3 433 0.907 - 0.907 - - - - - - -
54. chico ENSDARG00000019588 77 0.907 - - 0.907 - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
55. map1lc3c ENSDARG00000100528 31 0.907 - - 0.907 - - - - - - microtubule-associated protein 1 light chain 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1080]
56. ptn ENSDARG00000102340 229 0.907 - - 0.907 - - - - - - pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
57. zgc:112038 ENSDARG00000046140 73 0.905 - - - - - - 0.905 - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
58. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 0.904 - - 0.904 - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
59. ZNF518B 475 0.902 - - 0.902 - - - - - - zinc finger protein 518B
60. trim3b ENSDARG00000005397 680 0.902 - - - - - - 0.902 - - tripartite motif containing 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1132]
61. NGRN ENSDARG00000061314 285 0.902 - 0.902 - - - - - - - neugrin, neurite outgrowth associated [Source:ZFIN;Acc:ZDB-GENE-060503-19]
62. CABZ01068473.1 CABZ01068473.1 67 0.902 - - 0.902 - - - - - -
63. dock4b ENSDARG00000024874 32 0.901 - - 0.901 - - - - - - dedicator of cytokinesis 4b [Source:ZFIN;Acc:ZDB-GENE-060130-74]
64. BX004873.3 BX004873.3 59 0.901 - - 0.901 - - - - - -
65. cd40 ENSDARG00000054968 90 0.901 - - 0.901 - - - - - - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
66. lpar6b ENSDARG00000069441 65 0.901 - - 0.901 - - - - - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
67. slc6a13l 121 0.901 0.901 - - - - - - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
68. nxnl2 ENSDARG00000003934 386 0.9 0.900 - - - - - - - - nucleoredoxin like 2 [Source:ZFIN;Acc:ZDB-GENE-041212-55]
69. pgap2 ENSDARG00000044596 60 0.899 - - 0.899 - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
70. ponzr2 ENSDARG00000088539, ENSDARG00000113036 163 0.899 - - 0.899 - - - - - - plac8 onzin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-050411-41]
71. BX649494.1 BX649494.1 195 0.898 - - 0.898 - - - - - -
72. lrp1bb ENSDARG00000061517 172 0.895 - - 0.895 - - - - - - low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
73. rprd2a ENSDARG00000058089 743 0.894 0.894 - - - - - - - - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
74. fnbp1l ENSDARG00000020131 79 0.893 - - 0.893 - - - - - - formin binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040801-155]
75. trip4 ENSDARG00000098074 79 0.892 - - 0.892 - - - - - - thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]
76. arsa ENSDARG00000042270 74 0.892 - - 0.892 - - - - - - arylsulfatase A [Source:ZFIN;Acc:ZDB-GENE-050320-118]
77. mtif3 ENSDARG00000039649 464 0.892 - 0.892 - - - - - - - mitochondrial translational initiation factor 3 [Source:ZFIN;Acc:ZDB-GENE-060228-1]
78. rock2b ENSDARG00000004877, ENSDARG00000096433 135 0.889 - 0.889 - - - - - - - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
79. cyb5r4 ENSDARG00000020898 119 0.889 - - 0.889 - - - - - - cytochrome b5 reductase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-225]
80. nr2c2ap ENSDARG00000056162 368 0.889 - 0.889 - - - - - - - nuclear receptor 2C2-associated protein [Source:ZFIN;Acc:ZDB-GENE-050208-758]
81. thrb ENSDARG00000021163 262 0.889 - - 0.889 - - - - - - thyroid hormone receptor beta [Source:ZFIN;Acc:ZDB-GENE-990415-268]
82. zgc:110353 ENSDARG00000039443 80 0.888 - - 0.888 - - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
83. hoxb5a ENSDARG00000013057 735 0.886 0.886 - - - - - - - - homeobox B5a [Source:ZFIN;Acc:ZDB-GENE-980526-70]
84. U1_50 U1_50 62 0.886 - - 0.886 - - - - - -
85. rab25a ENSDARG00000058800 451 0.885 - - 0.885 - - - - - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
86. CDH24 CDH24 325 0.884 - - 0.884 - - - - - -
87. TEKT4 ENSDARG00000028899 47 0.884 - 0.884 - - - - - - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
88. arhgap29b ENSDARG00000017748 812 0.884 - - - - - - 0.884 - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
89. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 0.884 - - - - - - 0.884 - - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
90. CABZ01081748.1 ENSDARG00000102139 31 0.883 - - 0.883 - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
91. si:ch211-260m19.8 si:ch211-260m19.8 33 0.881 - - 0.881 - - - - - -
92. cxcl-c1c cxcl-c1c 159 0.88 - - 0.880 - - - - - -
93. ccdc127a 39 0.877 - - 0.877 - - - - - - coiled-coil domain containing 127a, transcript variant X2
94. uso1 ENSDARG00000019581 479 0.877 0.877 - - - - - - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
95. METRNL 166 0.877 - - 0.877 - - - - - - meteorin, glial cell differentiation regulator-like
96. PEG3_12 PEG3_12 128 0.876 - - 0.876 - - - - - -
97. armc4 ENSDARG00000055128 220 0.875 - 0.875 - - - - - - - armadillo repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-100316-7]
98. sigirr ENSDARG00000062204 52 0.874 - - 0.874 - - - - - - single immunoglobulin and toll-interleukin 1 receptor (TIR) domain [Source:ZFIN;Acc:ZDB-GENE-080303-3]
99. si:ch211-243a20.3 ENSDARG00000092240 151 0.873 - - 0.873 - - - - - - si:ch211-243a20.3 [Source:ZFIN;Acc:ZDB-GENE-061207-28]
100. zgc:91890 ENSDARG00000018980 198 0.873 - 0.873 - - - - - - - zgc:91890 [Source:ZFIN;Acc:ZDB-GENE-040704-21]

There are 888 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA