Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for shc1

Gene Name Gene ID Reads Annotation
shc1 ENSDARG00000075437 3278 SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]










Genes with expression patterns similar to shc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. shc1 ENSDARG00000075437 3278 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
2. esyt2a ENSDARG00000030824 1907 3.298 0.793 0.743 0.935 - - - 0.827 - - extended synaptotagmin-like protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-588]
3. zgc:92360 ENSDARG00000038151 2161 2.494 - 0.711 0.940 - - - 0.843 - - zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
4. abcg2c ENSDARG00000058574 1261 2.464 - - 0.967 - - - 0.762 - 0.735 ATP-binding cassette, sub-family G (WHITE), member 2c [Source:ZFIN;Acc:ZDB-GENE-050517-37]
5. txn ENSDARG00000044125, ENSDARG00000116040 4758 2.447 - 0.803 - - - 0.813 0.831 - - thioredoxin [Source:ZFIN;Acc:ZDB-GENE-040718-162]
6. atp6v0ca ENSDARG00000057853 23277 2.445 - - - - - 0.711 0.896 0.838 - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
7. sult2st1_1 ENSDARG00000033170 3074 2.42 - 0.920 - - - 0.789 0.711 - - sulfotransferase family 2, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030219-114]
8. ctps1a ENSDARG00000030700 3868 2.419 - 0.744 0.885 - - - 0.790 - - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
9. id3 ENSDARG00000054823 3484 2.41 - - - - - 0.771 0.849 0.790 - inhibitor of DNA binding 3 [Source:ZFIN;Acc:ZDB-GENE-020515-1]
10. rac2 ENSDARG00000038010 5837 2.37 - - 0.874 - - 0.786 - - 0.710 Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
11. ehd1a ENSDARG00000098853 1092 2.369 - 0.718 0.940 - - - 0.711 - - EH-domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2518]
12. arpc5a ENSDARG00000039142 5482 2.36 - 0.706 0.936 - - 0.718 - - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
13. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 2.357 - - 0.874 - - - 0.729 - 0.754 pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
14. limk2 ENSDARG00000005104 2598 2.348 - 0.718 - - - - 0.746 0.884 - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
15. elmod2 ENSDARG00000101669 3101 2.345 - 0.702 - - - - 0.755 0.888 - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
16. golga7 ENSDARG00000057676 4691 2.335 - 0.713 - - - - 0.775 0.847 - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
17. degs2 ENSDARG00000042544 1912 2.325 0.728 - - - - 0.766 0.831 - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
18. pls3 ENSDARG00000037655 5175 2.32 0.710 0.835 - - - - 0.775 - - plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]
19. vta1 ENSDARG00000013732 6072 2.312 - 0.716 - - - 0.723 - 0.873 - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
20. psd3l ENSDARG00000104820 1201 2.308 - 0.730 - - - - - 0.860 0.718 pleckstrin and Sec7 domain containing 3, like [Source:ZFIN;Acc:ZDB-GENE-030131-8195]
21. serinc2 ENSDARG00000056532 1406 2.298 - 0.717 - - - - 0.861 - 0.720 serine incorporator 2 [Source:ZFIN;Acc:ZDB-GENE-041111-296]
22. oclna ENSDARG00000005108 3280 2.289 - 0.801 - - - 0.750 0.738 - - occludin a [Source:ZFIN;Acc:ZDB-GENE-040426-2685]
23. ftr83 ENSDARG00000025403, ENSDARG00000110533 1428 2.272 - 0.708 - - - 0.825 0.739 - - finTRIM family, member 83 [Source:ZFIN;Acc:ZDB-GENE-031002-11]
24. si:dkey-117n7.3 ENSDARG00000092944 2518 2.264 - - - - - 0.771 0.764 - 0.729 si:dkey-117n7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-143]
25. itgb1b.1 ENSDARG00000053232 4721 2.255 - 0.781 - - - 0.710 0.764 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
26. naga ENSDARG00000099313 2483 2.242 - 0.733 - - - 0.735 0.774 - - N-acetylgalactosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-051113-256]
27. ppl ENSDARG00000101043 9196 2.22 - - - - 0.708 0.766 0.746 - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
28. g6pca.2 ENSDARG00000013721 2034 2.2 - 0.724 - - - 0.704 0.772 - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
29. arpc2 ENSDARG00000075989 22423 2.168 - 0.706 0.732 - - - 0.730 - - actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
30. phgdh ENSDARG00000001873 8325 1.807 - - 0.962 - - - 0.845 - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
31. elovl7b ENSDARG00000100185 2032 1.791 - - 0.952 - - - 0.839 - - ELOVL fatty acid elongase 7b [Source:ZFIN;Acc:ZDB-GENE-030131-5485]
32. txnl4a ENSDARG00000036190 2048 1.747 - - 0.938 - - - - 0.809 - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
33. yif1a ENSDARG00000019636 2215 1.746 - - 0.932 - - 0.814 - - - Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
34. si:dkey-199f5.8 ENSDARG00000018853 3249 1.736 - - - - - 0.934 0.802 - - si:dkey-199f5.8 [Source:ZFIN;Acc:ZDB-GENE-030131-4733]
35. tmem45b ENSDARG00000056239 2395 1.73 - - - - - 0.826 0.904 - - transmembrane protein 45B [Source:ZFIN;Acc:ZDB-GENE-040426-1904]
36. zgc:56530 zgc:56530 6300 1.723 - - - - - 0.884 0.839 - -
37. optn ENSDARG00000002663, ENSDARG00000111364 1440 1.722 - - - - - - 0.854 0.868 - optineurin [Source:ZFIN;Acc:ZDB-GENE-030131-8103]
38. ch1073-291c23.1 2426 1.72 - - - - - 0.865 0.855 - - ch1073-291c23.1, transcript variant X6
39. gpkow ENSDARG00000029612 1395 1.719 - 0.793 - - - - - 0.926 - G patch domain and KOW motifs [Source:ZFIN;Acc:ZDB-GENE-030616-159]
40. tpst1 ENSDARG00000073872 2490 1.713 - - - - - - 0.854 0.859 - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
41. nos1apa ENSDARG00000078725, ENSDARG00000105071 3815 1.709 - 0.842 - - - - 0.867 - - nitric oxide synthase 1 (neuronal) adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-081024-1]
42. cyb5b ENSDARG00000099774 1224 1.704 - 0.831 - - - - 0.873 - - cytochrome b5 type B [Source:ZFIN;Acc:ZDB-GENE-040426-2614]
43. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 1.703 - - - - - 0.809 0.894 - - ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
44. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.703 - - - - - 0.890 0.813 - - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
45. nfe2l2a ENSDARG00000042824 1707 1.701 - - - - - - 0.784 0.917 - nuclear factor, erythroid 2-like 2a [Source:ZFIN;Acc:ZDB-GENE-030723-2]
46. yeats4 ENSDARG00000045874 1168 1.7 - 0.748 0.952 - - - - - - YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
47. tax1bp1b ENSDARG00000056856 4526 1.695 - - 0.947 - - - 0.748 - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
48. atpv0e1 atpv0e1 1957 1.691 - - 0.925 - - - 0.766 - -
49. CD99L2 ENSDARG00000056722 5588 1.688 - - - - - 0.776 0.912 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
50. smpd1 ENSDARG00000076121 584 1.688 - 0.738 0.950 - - - - - - sphingomyelin phosphodiesterase 1, acid lysosomal [Source:ZFIN;Acc:ZDB-GENE-110411-222]
51. sirt2 ENSDARG00000011488 5389 1.687 - - 0.892 - - 0.795 - - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
52. FBXW7 ENSDARG00000060994 1675 1.685 - - 0.936 - - - - - 0.749 F-box and WD repeat domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-090313-79]
53. epn2 ENSDARG00000008377 5458 1.684 - - 0.902 - - - - - 0.782 epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
54. ATOX1 ENSDARG00000087693 4016 1.684 - - - - - 0.827 0.857 - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
55. s100v1 ENSDARG00000070427 6633 1.684 - - - - - 0.823 0.861 - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
56. C20H1orf198 C20H1orf198 246 1.683 - 0.773 - - - - - 0.910 -
57. BX004812.1 ENSDARG00000096968 5467 1.682 - - - - - - 0.856 0.826 -
58. zmynd11 ENSDARG00000057249, ENSDARG00000114501 2067 1.68 - - 0.927 - - - 0.753 - - zinc finger, MYND-type containing 11 [Source:ZFIN;Acc:ZDB-GENE-050522-301]
59. jak2b ENSDARG00000018882 1141 1.676 - 0.783 - - - 0.893 - - - Janus kinase 2b [Source:ZFIN;Acc:ZDB-GENE-980526-123]
60. lgals3l lgals3l 3833 1.675 - - 0.952 - - 0.723 - - -
61. cxcr4a ENSDARG00000057633 1829 1.672 - 0.811 - - - - - 0.861 - chemokine (C-X-C motif) receptor 4a [Source:ZFIN;Acc:ZDB-GENE-020102-1]
62. znrf2a ENSDARG00000077855 1845 1.672 - 0.811 - - - - 0.861 - - zinc and ring finger 2a [Source:ZFIN;Acc:ZDB-GENE-070820-15]
63. tbc1d12a ENSDARG00000038237 698 1.669 - - 0.950 - - - - - 0.719 TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
64. PTDSS2 ENSDARG00000101018 881 1.667 0.726 - 0.941 - - - - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
65. pik3r1 ENSDARG00000038524 3615 1.666 - - - - - 0.885 0.781 - - phosphoinositide-3-kinase, regulatory subunit 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-1280]
66. dctn3 ENSDARG00000041363 3351 1.665 - - 0.949 - - - - 0.716 - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
67. ZFP36 ZFP36 1677 1.662 - - - - - 0.790 0.872 - -
68. ywhabl ENSDARG00000040287 39045 1.659 - - - - - 0.875 0.784 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
69. si:dkey-22o12.7 si:dkey-22o12.7 1812 1.654 - - - - - 0.773 - 0.881 -
70. tmbim1 tmbim1 1005 1.647 0.701 - 0.946 - - - - - -
71. itm2bb ENSDARG00000041505 2734 1.645 - - - - - 0.874 0.771 - - integral membrane protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2139]
72. srp19 ENSDARG00000035699 2624 1.644 - - - - - 0.804 - 0.840 - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
73. wnt10a ENSDARG00000017155 491 1.644 - - 0.941 - - - 0.703 - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
74. CASKIN2_1 CASKIN2_1 2299 1.643 - - - - - - - 0.932 0.711
75. pitpnbl ENSDARG00000015310, ENSDARG00000110980 3266 1.642 - 0.712 0.930 - - - - - - phosphatidylinositol transfer protein, beta, like [Source:ZFIN;Acc:ZDB-GENE-040426-2791]
76. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.641 - 0.855 - - - - - 0.786 - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
77. nfil3 ENSDARG00000042977, ENSDARG00000110085 1565 1.641 0.790 - - - - - 0.851 - - nuclear factor, interleukin 3 regulated [Source:ZFIN;Acc:ZDB-GENE-040822-28]
78. col16a1 ENSDARG00000009194 5600 1.639 - 0.732 - - - 0.907 - - - collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
79. map9 ENSDARG00000037276, ENSDARG00000115648 581 1.639 - 0.727 - - - - - 0.912 - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
80. pdlim4 ENSDARG00000068973 2567 1.636 - - - - - - - 0.899 0.737 PDZ and LIM domain 4 [Source:ZFIN;Acc:ZDB-GENE-070308-5]
81. tmem258 ENSDARG00000078785 9578 1.634 - 0.739 0.895 - - - - - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
82. arpc4l ENSDARG00000058225 10107 1.632 - - 0.872 - - 0.760 - - - actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
83. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 1.628 - - 0.898 - - - - 0.730 - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
84. arhgdig ENSDARG00000004034 10368 1.626 - 0.752 - - - - 0.874 - - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
85. gabarapl2 ENSDARG00000027200 5120 1.625 - - - - - 0.818 0.807 - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
86. CU633910.1 CU633910.1 828 1.625 - - - - - 0.907 0.718 - -
87. arpc5b ENSDARG00000019062 2786 1.624 - 0.739 - - - - 0.885 - - actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
88. tceb1a 969 1.622 0.707 - - - - - - 0.915 - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
89. itgav ENSDARG00000006314 4277 1.62 - - - - - 0.896 0.724 - - integrin, alpha V [Source:ZFIN;Acc:ZDB-GENE-060616-382]
90. adam10a ENSDARG00000053468 9308 1.62 - - - - - 0.830 0.790 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
91. lrrc24 ENSDARG00000101704 224 1.616 0.703 - - - - - - 0.913 - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
92. RNF5 ENSDARG00000075606 1730 1.614 - - - - - - 0.700 0.914 - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
93. soul2 ENSDARG00000039499 1469 1.613 - - - - - 0.800 0.813 - - heme-binding protein soul2 [Source:ZFIN;Acc:ZDB-GENE-030131-2524]
94. lims1 ENSDARG00000026985 2072 1.613 - 0.777 - - - - 0.836 - - LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]
95. hgs ENSDARG00000020960 3574 1.612 - 0.730 - - - - 0.882 - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
96. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.612 - - - - - - - 0.910 0.702 GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
97. nufip2 ENSDARG00000069066 3965 1.611 - - - - - 0.875 0.736 - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
98. smim14 ENSDARG00000005799, ENSDARG00000110934 1094 1.609 - 0.818 - - - - 0.791 - - small integral membrane protein 14 [Source:ZFIN;Acc:ZDB-GENE-040426-22]
99. cdc42ep4b ENSDARG00000045036 1295 1.609 - 0.807 - - - - 0.802 - - CDC42 effector protein (Rho GTPase binding) 4b [Source:ZFIN;Acc:ZDB-GENE-091008-2]
100. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 1.609 - - - - - 0.796 0.813 - - transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]

There are 1653 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA