Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for shank3a

Gene Name Gene ID Reads Annotation
shank3a ENSDARG00000063332 5 SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]










Genes with expression patterns similar to shank3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. shank3a ENSDARG00000063332 5 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
2. dnajc5b ENSDARG00000058147 6 2 - - 1.000 - 1.000 - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
3. UIMC1 200 2 - - 1.000 - - - - 1.000 - ubiquitin interaction motif containing 1
4. CABZ01079009.1 CABZ01079009.1 1 2 - - 1.000 1.000 - - - - -
5. PRKCA_1 ENSDARG00000099841 12 2 - - 1.000 - - 1.000 - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
6. si:dkey-92j12.5 ENSDARG00000094677 5 2 - - 1.000 1.000 - - - - - si:dkey-92j12.5 [Source:ZFIN;Acc:ZDB-GENE-090313-354]
7. si:dkey-284p5.3 ENSDARG00000095638 4 2 - - 1.000 - - 1.000 - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
8. clec3ba ENSDARG00000076541 3 2 - - 1.000 - - - - 1.000 - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
9. si:dkey-11e23.3 si:dkey-11e23.3 3 2 - - - - - 1.000 - 1.000 -
10. psmb11 psmb11 5 2 - - - - - 1.000 - 1.000 -
11. ppid_1 ENSDARG00000038835 4 1.946 - - - 0.946 1.000 - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
12. si:ch211-274p24.3 si:ch211-274p24.3 72 1.895 - - - 0.895 - 1.000 - - -
13. slc1a9 ENSDARG00000098269 12 1.795 - - - - 0.795 - - 1.000 - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
14. rhol ENSDARG00000070666 0 1.792 - - - 0.792 1.000 - - - - rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]
15. GPX2 ENSDARG00000089149 10 1.792 - - 1.000 0.792 - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
16. NPY2R ENSDARG00000094763, ENSDARG00000112792 1 1.792 - - - 0.792 - 1.000 - - - neuropeptide Y receptor Y2 [Source:ZFIN;Acc:ZDB-GENE-040924-8]
17. si:dkey-238m4.4 ENSDARG00000093248 3 1.792 - - - 0.792 - - - 1.000 - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
18. xcr1a xcr1a 3 1.764 - - 0.764 - - 1.000 - - -
19. ncanb ENSDARG00000005783 22 1.761 - - - - 0.761 1.000 - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
20. tcf3a ENSDARG00000005915 12 1.756 - - 0.756 - 1.000 - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
21. CCDC74B CCDC74B 8 1.743 - - - - 1.000 - - - 0.743
22. BX088718.1 ENSDARG00000101847 3 1.729 - - - - 1.000 - - - 0.729
23. CABZ01063402.1 CABZ01063402.1 64 1.725 - - - - - 1.000 - 0.725 -
24. RAI1 ENSDARG00000076679 59 1.614 - - 0.868 - - 0.746 - - - retinoic acid induced 1 [Source:ZFIN;Acc:ZDB-GENE-101203-2]
25. BSN_1 BSN_1 21 1.577 - - 0.831 - - 0.746 - - -
26. ghrh ENSDARG00000069481, ENSDARG00000111551 9 1.556 - - 0.764 0.792 - - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
27. si:rp71-7l19.6 si:rp71-7l19.6 12 1.556 - - 0.764 0.792 - - - - -
28. ZNF423 ENSDARG00000059707 11 1.553 - - - 0.792 0.761 - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
29. gpr88 24 1.545 - - 0.772 0.773 - - - - - G protein-coupled receptor 88
30. evx2 ENSDARG00000059255 317 1.505 - - 0.790 - - 0.715 - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
31. TMEM121 TMEM121 4 1.444 - - - - - 0.739 - - 0.705
32. si:ch211-207c7.6 si:ch211-207c7.6 23 1 - - - - - 1.000 - - -
33. BX004816.1 ENSDARG00000040497 0 1 - - - - 1.000 - - - - GTPase IMAP family member 4-like [Source:NCBI gene;Acc:571124]
34. CABZ01073085.1 CABZ01073085.1 1 1 - - - - 1.000 - - - -
35. si:dkey-258f14.3 ENSDARG00000075974 9 1 - - - - 1.000 - - - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
36. si:dkey-13d5.1 si:dkey-13d5.1 3 1 - - 1.000 - - - - - -
37. si:dkey-11d20.4 si:dkey-11d20.4 6 1 - - 1.000 - - - - - -
38. nr1d4a ENSDARG00000031161 24 1 - - - - - 1.000 - - - nuclear receptor subfamily 1, group D, member 4a [Source:ZFIN;Acc:ZDB-GENE-080403-5]
39. BX469930.1 ENSDARG00000092358 3 1 - - - 1.000 - - - - -
40. slc12a5a ENSDARG00000075815 9 1 - - 1.000 - - - - - - solute carrier family 12 (potassium/chloride transporter), member 5a [Source:ZFIN;Acc:ZDB-GENE-120927-3]
41. CR318629.1 CR318629.1 7 1 - - - - - 1.000 - - -
42. CU468684.1 CU468684.1 1 1 - - 1.000 - - - - - -
43. BX927318.2 BX927318.2 5 1 - - 1.000 - - - - - -
44. pi15b ENSDARG00000061292 1 1 - - - - 1.000 - - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
45. si:ch211-207c6.4 si:ch211-207c6.4 7 1 - - 1.000 - - - - - -
46. Y_RNA Y_RNA 0 1 - - - - - - - 1.000 -
47. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - - - - - 1.000 - - -
48. si:ch211-262n1.5 12 1 - - 1.000 - - - - - - si:ch211-262n1.5
49. si:ch211-86k6.3 si:ch211-86k6.3 1 1 - - - 1.000 - - - - -
50. rfxank ENSDARG00000016730 12 1 - - - 1.000 - - - - - regulatory factor X-associated ankyrin-containing protein [Source:ZFIN;Acc:ZDB-GENE-050208-596]
51. ARHGEF10L ARHGEF10L 18 1 - - - - - 1.000 - - -
52. fabp10a ENSDARG00000038439 4 1 - - - - 1.000 - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
53. lgsn ENSDARG00000007715 8 1 - - - - 1.000 - - - - lengsin, lens protein with glutamine synthetase domain [Source:ZFIN;Acc:ZDB-GENE-060312-26]
54. si:ch211-268b13.6 si:ch211-268b13.6 0 1 - - - - 1.000 - - - -
55. IKZF4 ENSDARG00000037068 36 1 - - - - - 1.000 - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
56. si:dkey-30h14.3 si:dkey-30h14.3 1 1 - - 1.000 - - - - - -
57. si:dkey-111i23.1 ENSDARG00000094811 1 1 - - - - 1.000 - - - - si:dkey-111i23.1 [Source:ZFIN;Acc:ZDB-GENE-070912-351]
58. CABZ01117474.1 CABZ01117474.1 2 1 - - - - 1.000 - - - -
59. CABZ01080599.1 ENSDARG00000111801 0 1 - - 1.000 - - - - - - uncharacterized LOC101885127 [Source:NCBI gene;Acc:101885127]
60. BX004879.1 BX004879.1 0 1 - - 1.000 - - - - - -
61. fam57bb ENSDARG00000074564 2 1 - - - - 1.000 - - - - family with sequence similarity 57, member Bb [Source:ZFIN;Acc:ZDB-GENE-110603-2]
62. CABZ01073654.1 CABZ01073654.1 16 1 - - - - - 1.000 - - -
63. ccdc14 ENSDARG00000098734 3 1 - - - - 1.000 - - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
64. CU655870.1 ENSDARG00000101035 1 1 - - - - 1.000 - - - -
65. GAS2 18 1 - - - - - 1.000 - - - growth arrest specific 2, transcript variant X1
66. arl8 ENSDARG00000094709 6 1 - - - - 1.000 - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
67. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - 1.000 - - - - - - si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
68. si:ch211-39i19.5 si:ch211-39i19.5 6 1 - - 1.000 - - - - - -
69. si:ch73-340m8.2 ENSDARG00000040258 2 1 - - - - - - - 1.000 - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
70. oprm1 ENSDARG00000039434 22 1 - - - 1.000 - - - - - opioid receptor, mu 1 [Source:ZFIN;Acc:ZDB-GENE-010125-1]
71. CU570691.1 ENSDARG00000088908 5 1 - - - - 1.000 - - - -
72. crhr1 ENSDARG00000003989 5 1 - - 1.000 - - - - - - corticotropin releasing hormone receptor 1 [Source:ZFIN;Acc:ZDB-GENE-081231-1]
73. si:ch73-366i20.1 ENSDARG00000092949 0 1 - - 1.000 - - - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
74. agt ENSDARG00000016412 17 1 - - - - 1.000 - - - - angiotensinogen [Source:ZFIN;Acc:ZDB-GENE-030131-1205]
75. si:dkeyp-82a1.2 ENSDARG00000094192 2 1 - - - - - 1.000 - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
76. 5S_rRNA_13 5S_rRNA_13 0 1 - - 1.000 - - - - - -
77. si:dkey-14d8.19 si:dkey-14d8.19 12 1 - - - - 1.000 - - - -
78. DTWD2 ENSDARG00000101873 1 1 - - - - 1.000 - - - - DTW domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120215-183]
79. si:ch211-281k12.1 si:ch211-281k12.1 1 1 - - - - 1.000 - - - -
80. si:ch211-245l1.1 si:ch211-245l1.1 1 1 - - - - - 1.000 - - -
81. asap3 ENSDARG00000021896 19 1 - - - - - - - 1.000 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
82. si:dkey-94e7.2 ENSDARG00000068474 14 1 - - - - 1.000 - - - - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
83. SYT17 ENSDARG00000060741 1 1 - - - - - 1.000 - - - synaptotagmin XVII [Source:ZFIN;Acc:ZDB-GENE-090527-1]
84. taar20b1 ENSDARG00000110415, ENSDARG00000110775, ENSDARG00000112935 1 1 - - - - 1.000 - - - - trace amine associated receptor 20b1 [Source:ZFIN;Acc:ZDB-GENE-060413-5]
85. wnt10b ENSDARG00000040925 162 1 - - - - - 1.000 - - - wingless-type MMTV integration site family, member 10b [Source:ZFIN;Acc:ZDB-GENE-980526-524]
86. CU655969.1 CU655969.1 0 1 - - - - 1.000 - - - -
87. CABZ01085177.1 ENSDARG00000104644 6 1 - - 1.000 - - - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
88. MTSS1L MTSS1L 7 1 - - - - - - - 1.000 -
89. CABZ01009626.1 CABZ01009626.1 2 1 - - - - - 1.000 - - -
90. CR356247.1 CR356247.1 2 1 - - - - 1.000 - - - -
91. si:ch211-168h21.3 10 1 - - - - - 1.000 - - - si:ch211-168h21.3
92. si:dkeyp-123a12.1 si:dkeyp-123a12.1 1 1 - - - - 1.000 - - - -
93. CU928854.1 CU928854.1 3 1 - - - - - - - 1.000 -
94. si:dkey-11d18.2 0 1 - - - - 1.000 - - - - si:dkey-11d18.2
95. si:dkey-60a16.4 si:dkey-60a16.4 14 1 - - 1.000 - - - - - -
96. si:dkey-20d21.6 si:dkey-20d21.6 0 1 - - 1.000 - - - - - -
97. RNF151 ENSDARG00000075046, ENSDARG00000115743 3 1 - - 1.000 - - - - - - ring finger protein 151 [Source:ZFIN;Acc:ZDB-GENE-121214-234]
98. si:ch211-137i24.12 ENSDARG00000094537 35 1 - - - - - - - 1.000 - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
99. fancm ENSDARG00000103933 1 1 - - - - 1.000 - - - - FA complementation group M [Source:ZFIN;Acc:ZDB-GENE-090929-1]
100. wfs1b ENSDARG00000074617 69 1 - - - - - 1.000 - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]

There are 775 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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