Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for shank3a

Gene Name Gene ID Reads Annotation
shank3a ENSDARG00000063332 5 SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]










Genes with expression patterns similar to shank3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. shank3a ENSDARG00000063332 5 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
2. clec3ba ENSDARG00000076541 3 2 - - 1.000 - - - - 1.000 - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
3. dnajc5b ENSDARG00000058147 6 2 - - 1.000 - 1.000 - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
4. CABZ01079009.1 CABZ01079009.1 1 2 - - 1.000 1.000 - - - - -
5. si:dkey-92j12.5 ENSDARG00000094677 5 2 - - 1.000 1.000 - - - - - si:dkey-92j12.5 [Source:ZFIN;Acc:ZDB-GENE-090313-354]
6. si:dkey-284p5.3 ENSDARG00000095638 4 2 - - 1.000 - - 1.000 - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
7. PRKCA_1 ENSDARG00000099841 12 2 - - 1.000 - - 1.000 - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
8. psmb11 psmb11 5 2 - - - - - 1.000 - 1.000 -
9. si:dkey-11e23.3 si:dkey-11e23.3 3 2 - - - - - 1.000 - 1.000 -
10. UIMC1 200 2 - - 1.000 - - - - 1.000 - ubiquitin interaction motif containing 1
11. ppid_1 ENSDARG00000038835 4 1.946 - - - 0.946 1.000 - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
12. si:ch211-274p24.3 si:ch211-274p24.3 72 1.895 - - - 0.895 - 1.000 - - -
13. slc1a9 ENSDARG00000098269 12 1.795 - - - - 0.795 - - 1.000 - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
14. GPX2 ENSDARG00000089149 10 1.792 - - 1.000 0.792 - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
15. NPY2R ENSDARG00000094763, ENSDARG00000112792 1 1.792 - - - 0.792 - 1.000 - - - neuropeptide Y receptor Y2 [Source:ZFIN;Acc:ZDB-GENE-040924-8]
16. si:dkey-238m4.4 ENSDARG00000093248 3 1.792 - - - 0.792 - - - 1.000 - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
17. rhol ENSDARG00000070666 0 1.792 - - - 0.792 1.000 - - - - rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]
18. xcr1a xcr1a 3 1.764 - - 0.764 - - 1.000 - - -
19. ncanb ENSDARG00000005783 22 1.761 - - - - 0.761 1.000 - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
20. tcf3a ENSDARG00000005915 12 1.756 - - 0.756 - 1.000 - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
21. CCDC74B CCDC74B 8 1.743 - - - - 1.000 - - - 0.743
22. BX088718.1 ENSDARG00000101847 3 1.729 - - - - 1.000 - - - 0.729
23. CABZ01063402.1 CABZ01063402.1 64 1.725 - - - - - 1.000 - 0.725 -
24. RAI1 ENSDARG00000076679 59 1.614 - - 0.868 - - 0.746 - - - retinoic acid induced 1 [Source:ZFIN;Acc:ZDB-GENE-101203-2]
25. BSN_1 BSN_1 21 1.577 - - 0.831 - - 0.746 - - -
26. ghrh ENSDARG00000069481, ENSDARG00000111551 9 1.556 - - 0.764 0.792 - - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
27. si:rp71-7l19.6 si:rp71-7l19.6 12 1.556 - - 0.764 0.792 - - - - -
28. ZNF423 ENSDARG00000059707 11 1.553 - - - 0.792 0.761 - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
29. gpr88 24 1.545 - - 0.772 0.773 - - - - - G protein-coupled receptor 88
30. evx2 ENSDARG00000059255 317 1.505 - - 0.790 - - 0.715 - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
31. TMEM121 TMEM121 4 1.444 - - - - - 0.739 - - 0.705
32. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - - - - - 1.000 - - -
33. esyt1b ENSDARG00000014239 8 1 - - 1.000 - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
34. si:dkey-11d18.2 0 1 - - - - 1.000 - - - - si:dkey-11d18.2
35. ccr7 ENSDARG00000044561 2 1 - - - - - 1.000 - - - chemokine (C-C motif) receptor 7 [Source:ZFIN;Acc:ZDB-GENE-060522-2]
36. ftr56 ENSDARG00000030954 23 1 - - - - - - - 1.000 - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
37. pde5ab ENSDARG00000051915 18 1 - - 1.000 - - - - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
38. CABZ01085394.1 CABZ01085394.1 0 1 - - - - 1.000 - - - -
39. TSPEAR TSPEAR 9 1 - - - - 1.000 - - - -
40. VOPP1 ENSDARG00000076373 12 1 - - 1.000 - - - - - - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
41. DTWD2 ENSDARG00000101873 1 1 - - - - 1.000 - - - - DTW domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120215-183]
42. si:ch211-268b13.6 si:ch211-268b13.6 0 1 - - - - 1.000 - - - -
43. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - - - 1.000 - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
44. ftr79 ENSDARG00000093972 1 1 - - 1.000 - - - - - - finTRIM family, member 79 [Source:ZFIN;Acc:ZDB-GENE-060126-4]
45. syt9b ENSDARG00000029239 31 1 - - - - - 1.000 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
46. BX005294.2 ENSDARG00000109361 3 1 - - - - - 1.000 - - -
47. zp3b ENSDARG00000039828 15 1 - - - - 1.000 - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
48. crispld1a ENSDARG00000077275 7 1 - - 1.000 - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
49. adck1 ENSDARG00000062561 22 1 - - - - - - - 1.000 - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
50. PLCB1 2 1 - - - - - 1.000 - - - phospholipase C beta 1
51. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - - - 1.000 -
52. CR848664.1 CR848664.1 12 1 - - - - 1.000 - - - -
53. si:ch211-281k12.1 si:ch211-281k12.1 1 1 - - - - 1.000 - - - -
54. Y_RNA Y_RNA 0 1 - - - - - - - 1.000 -
55. hmgb2a ENSDARG00000029722 28 1 - - - - - 1.000 - - - high mobility group box 2a [Source:ZFIN;Acc:ZDB-GENE-051120-126]
56. zgc:165453 ENSDARG00000078183 3 1 - - - - - 1.000 - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
57. si:dkey-272j9.2 si:dkey-272j9.2 91 1 - - - - - 1.000 - - -
58. si:ch211-39i19.5 si:ch211-39i19.5 6 1 - - 1.000 - - - - - -
59. mir144 0 1 - - - - 1.000 - - - - microRNA 144
60. si:dkeyp-82a1.2 ENSDARG00000094192 2 1 - - - - - 1.000 - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
61. si:dkeyp-123a12.1 si:dkeyp-123a12.1 1 1 - - - - 1.000 - - - -
62. npy4r ENSDARG00000043341, ENSDARG00000113787 1 1 - - - - - 1.000 - - - neuropeptide Y receptor Y4 [Source:ZFIN;Acc:ZDB-GENE-980526-393]
63. gnrhr2 ENSDARG00000003553, ENSDARG00000113696 0 1 - - - - 1.000 - - - - gonadotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090128-3]
64. phox2bb ENSDARG00000091029 2 1 - - - - 1.000 - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
65. prg4a ENSDARG00000010482 10 1 - - 1.000 - - - - - - proteoglycan 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8295]
66. BX088603.2 ENSDARG00000099595 2 1 - - 1.000 - - - - - -
67. or111-11 ENSDARG00000041019 5 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 11 [Source:ZFIN;Acc:ZDB-GENE-010308-10]
68. zymnd12 17 1 - - - - - - - 1.000 - zinc finger, MYND-type containing 12, transcript variant X1
69. CR381630.1 CR381630.1 23 1 - - - - - 1.000 - - -
70. josd1 ENSDARG00000071548, ENSDARG00000113255, ENSDARG00000115146 4 1 - - 1.000 - - - - - - Josephin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-260]
71. 5S_rRNA_13 5S_rRNA_13 0 1 - - 1.000 - - - - - -
72. SNORD83 SNORD83 43 1 - - - - 1.000 - - - -
73. trim9 ENSDARG00000039123 53 1 - - - - - 1.000 - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
74. tnk2b ENSDARG00000104409 1 1 - - - - - 1.000 - - - tyrosine kinase, non-receptor, 2b [Source:ZFIN;Acc:ZDB-GENE-110411-165]
75. NCAM2 ENSDARG00000098523 2 1 - - 1.000 - - - - - - neural cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:7657]
76. trim62 ENSDARG00000060901 12 1 - - - - 1.000 - - - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
77. BX469930.1 ENSDARG00000092358 3 1 - - - 1.000 - - - - -
78. si:ch211-262n1.5 12 1 - - 1.000 - - - - - - si:ch211-262n1.5
79. GPR114 GPR114 1 1 - - - - - 1.000 - - -
80. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - - - - 1.000 - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
81. BX649490.1 ENSDARG00000091718 7 1 - - - - 1.000 - - - - titin-like [Source:NCBI gene;Acc:101883412]
82. FAM177A1 ENSDARG00000079636 19 1 - - - - - 1.000 - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
83. ARHGEF10L ARHGEF10L 18 1 - - - - - 1.000 - - -
84. fam57bb ENSDARG00000074564 2 1 - - - - 1.000 - - - - family with sequence similarity 57, member Bb [Source:ZFIN;Acc:ZDB-GENE-110603-2]
85. BX323796.1 BX323796.1 2 1 - - - - 1.000 - - - -
86. PEG3_18 PEG3_18 0 1 - - - - 1.000 - - - -
87. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - - - - - - - 1.000 - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
88. 5S_rRNA_15 5S_rRNA_15 9 1 - - - - - 1.000 - - -
89. BX927318.2 BX927318.2 5 1 - - 1.000 - - - - - -
90. AL929092.3 AL929092.3 0 1 - - 1.000 - - - - - -
91. spata7 ENSDARG00000075898 16 1 - - - - 1.000 - - - - spermatogenesis associated 7 [Source:ZFIN;Acc:ZDB-GENE-050419-61]
92. si:dkeyp-33c10.5 11 1 - - - - - 1.000 - - - si:dkeyp-33c10.5, transcript variant X2
93. si:ch211-168h21.3 10 1 - - - - - 1.000 - - - si:ch211-168h21.3
94. nsfa ENSDARG00000007654 16 1 - - - - - 1.000 - - - N-ethylmaleimide-sensitive factor a [Source:ZFIN;Acc:ZDB-GENE-030616-37]
95. mfi2 224 1 - - 1.000 - - - - - - antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, transcript variant X2
96. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - - - 1.000 - - - -
97. C17orf105 C17orf105 1 1 - - - - 1.000 - - - -
98. si:dkey-19h16.7 si:dkey-19h16.7 0 1 - - - - 1.000 - - - -
99. SLC25A22_1 SLC25A22_1 3 1 - - - - 1.000 - - - -
100. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - - - - 1.000 -

There are 775 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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