Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for shank3a

Gene Name Gene ID Reads Annotation
shank3a ENSDARG00000063332 5 SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]










Genes with expression patterns similar to shank3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. shank3a ENSDARG00000063332 5 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
2. si:dkey-11e23.3 si:dkey-11e23.3 3 2 - - - - - 1.000 - 1.000 -
3. psmb11 psmb11 5 2 - - - - - 1.000 - 1.000 -
4. si:dkey-284p5.3 ENSDARG00000095638 4 2 - - 1.000 - - 1.000 - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
5. si:dkey-92j12.5 ENSDARG00000094677 5 2 - - 1.000 1.000 - - - - - si:dkey-92j12.5 [Source:ZFIN;Acc:ZDB-GENE-090313-354]
6. dnajc5b ENSDARG00000058147 6 2 - - 1.000 - 1.000 - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
7. clec3ba ENSDARG00000076541 3 2 - - 1.000 - - - - 1.000 - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
8. UIMC1 200 2 - - 1.000 - - - - 1.000 - ubiquitin interaction motif containing 1
9. PRKCA_1 ENSDARG00000099841 12 2 - - 1.000 - - 1.000 - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
10. CABZ01079009.1 CABZ01079009.1 1 2 - - 1.000 1.000 - - - - -
11. ppid_1 ENSDARG00000038835 4 1.946 - - - 0.946 1.000 - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
12. si:ch211-274p24.3 si:ch211-274p24.3 72 1.895 - - - 0.895 - 1.000 - - -
13. slc1a9 ENSDARG00000098269 12 1.795 - - - - 0.795 - - 1.000 - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
14. si:dkey-238m4.4 ENSDARG00000093248 3 1.792 - - - 0.792 - - - 1.000 - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
15. NPY2R ENSDARG00000094763, ENSDARG00000112792 1 1.792 - - - 0.792 - 1.000 - - - neuropeptide Y receptor Y2 [Source:ZFIN;Acc:ZDB-GENE-040924-8]
16. GPX2 ENSDARG00000089149 10 1.792 - - 1.000 0.792 - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
17. rhol ENSDARG00000070666 0 1.792 - - - 0.792 1.000 - - - - rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]
18. xcr1a xcr1a 3 1.764 - - 0.764 - - 1.000 - - -
19. ncanb ENSDARG00000005783 22 1.761 - - - - 0.761 1.000 - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
20. tcf3a ENSDARG00000005915 12 1.756 - - 0.756 - 1.000 - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
21. CCDC74B CCDC74B 8 1.743 - - - - 1.000 - - - 0.743
22. BX088718.1 ENSDARG00000101847 3 1.729 - - - - 1.000 - - - 0.729
23. CABZ01063402.1 CABZ01063402.1 64 1.725 - - - - - 1.000 - 0.725 -
24. RAI1 ENSDARG00000076679 59 1.614 - - 0.868 - - 0.746 - - - retinoic acid induced 1 [Source:ZFIN;Acc:ZDB-GENE-101203-2]
25. BSN_1 BSN_1 21 1.577 - - 0.831 - - 0.746 - - -
26. ghrh ENSDARG00000069481, ENSDARG00000111551 9 1.556 - - 0.764 0.792 - - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
27. si:rp71-7l19.6 si:rp71-7l19.6 12 1.556 - - 0.764 0.792 - - - - -
28. ZNF423 ENSDARG00000059707 11 1.553 - - - 0.792 0.761 - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
29. gpr88 24 1.545 - - 0.772 0.773 - - - - - G protein-coupled receptor 88
30. evx2 ENSDARG00000059255 317 1.505 - - 0.790 - - 0.715 - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
31. TMEM121 TMEM121 4 1.444 - - - - - 0.739 - - 0.705
32. zgc:165582 ENSDARG00000074362 198 1 - - - - - 1.000 - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
33. si:dkey-20d21.6 si:dkey-20d21.6 0 1 - - 1.000 - - - - - -
34. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 1 - - - - - 1.000 - - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
35. mcoln1b ENSDARG00000058848 3 1 - - 1.000 - - - - - - mucolipin 1b [Source:ZFIN;Acc:ZDB-GENE-130514-1]
36. esyt1b ENSDARG00000014239 8 1 - - 1.000 - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
37. PLCB1 2 1 - - - - - 1.000 - - - phospholipase C beta 1
38. si:dkey-33i11.1 ENSDARG00000053027 2 1 - - 1.000 - - - - - - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
39. PDE1C PDE1C 1 1 - - - - 1.000 - - - -
40. LRRC38 LRRC38 5 1 - - - 1.000 - - - - -
41. prepl ENSDARG00000017853, ENSDARG00000114415 4 1 - - - - - 1.000 - - - prolyl endopeptidase like [Source:ZFIN;Acc:ZDB-GENE-090313-224]
42. si:dkey-111i23.1 ENSDARG00000094811 1 1 - - - - 1.000 - - - - si:dkey-111i23.1 [Source:ZFIN;Acc:ZDB-GENE-070912-351]
43. WASF1 ENSDARG00000060349 1 1 - - - - 1.000 - - - - WAS protein family, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-555]
44. si:dkey-29j8.4 si:dkey-29j8.4 17 1 - - 1.000 - - - - - -
45. hmgb2a ENSDARG00000029722 28 1 - - - - - 1.000 - - - high mobility group box 2a [Source:ZFIN;Acc:ZDB-GENE-051120-126]
46. si:dkey-89j23.3 si:dkey-89j23.3 9 1 - - 1.000 - - - - - -
47. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - - - - - - - 1.000 - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
48. ALOX5_1 ALOX5_1 0 1 - - - - 1.000 - - - -
49. mir144 0 1 - - - - 1.000 - - - - microRNA 144
50. crhb ENSDARG00000027657 9 1 - - - - 1.000 - - - - corticotropin releasing hormone b [Source:ZFIN;Acc:ZDB-GENE-041114-75]
51. SRCIN1 SRCIN1 5 1 - - 1.000 - - - - - -
52. pcdh1a4 0 1 - - 1.000 - - - - - - protocadherin 1 alpha 4
53. si:ch73-340m8.2 ENSDARG00000040258 2 1 - - - - - - - 1.000 - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
54. SYT17 ENSDARG00000060741 1 1 - - - - - 1.000 - - - synaptotagmin XVII [Source:ZFIN;Acc:ZDB-GENE-090527-1]
55. CR356247.1 CR356247.1 2 1 - - - - 1.000 - - - -
56. U1_45 U1_45 0 1 - - 1.000 - - - - - -
57. OSBPL1A ENSDARG00000105147 16 1 - - - - - 1.000 - - - oxysterol binding protein-like 1A [Source:ZFIN;Acc:ZDB-GENE-050208-657]
58. AL929092.3 AL929092.3 0 1 - - 1.000 - - - - - -
59. BX004816.2 ENSDARG00000087012 3 1 - - - - - - - 1.000 -
60. GPR114 GPR114 1 1 - - - - - 1.000 - - -
61. CABZ01087025.1 ENSDARG00000117232 10 1 - - - - - - - 1.000 -
62. CU928854.1 CU928854.1 3 1 - - - - - - - 1.000 -
63. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - - - - 1.000 - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
64. si:dkey-272j9.2 si:dkey-272j9.2 91 1 - - - - - 1.000 - - -
65. CR382281.1 ENSDARG00000100098 135 1 - - - - 1.000 - - - -
66. syt9b ENSDARG00000029239 31 1 - - - - - 1.000 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
67. ftr79 ENSDARG00000093972 1 1 - - 1.000 - - - - - - finTRIM family, member 79 [Source:ZFIN;Acc:ZDB-GENE-060126-4]
68. siglec15l ENSDARG00000076132 2 1 - - - - - - - 1.000 - sialic acid binding Ig-like lectin 15, like [Source:ZFIN;Acc:ZDB-GENE-100922-281]
69. si:dkeyp-123a12.1 si:dkeyp-123a12.1 1 1 - - - - 1.000 - - - -
70. zgc:92249 14 1 - - - - - 1.000 - - - zgc:92249
71. BAI2 BAI2 0 1 - - - - 1.000 - - - -
72. LDLR_1 LDLR_1 0 1 - - - - - - - 1.000 -
73. si:dkey-30h14.3 si:dkey-30h14.3 1 1 - - 1.000 - - - - - -
74. SNORD15_1 SNORD15_1 1 1 - - - - 1.000 - - - -
75. FAM120B ENSDARG00000030804 1 1 - - - - - 1.000 - - - family with sequence similarity 120B [Source:ZFIN;Acc:ZDB-GENE-040801-119]
76. ppp1r14c_1 ENSDARG00000077341 3 1 - - 1.000 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
77. si:dkeyp-33c10.5 11 1 - - - - - 1.000 - - - si:dkeyp-33c10.5, transcript variant X2
78. zgc:113176 ENSDARG00000040487 30 1 - - - - 1.000 - - - - zgc:113176 [Source:ZFIN;Acc:ZDB-GENE-050327-60]
79. si:rp71-18l21.1 si:rp71-18l21.1 2 1 - - - - 1.000 - - - -
80. nsfa ENSDARG00000007654 16 1 - - - - - 1.000 - - - N-ethylmaleimide-sensitive factor a [Source:ZFIN;Acc:ZDB-GENE-030616-37]
81. MYO7B MYO7B 8 1 - - - - 1.000 - - - -
82. si:dkey-76d18.1 si:dkey-76d18.1 0 1 - - - - 1.000 - - - -
83. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - - 1.000 - - - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
84. CABZ01085394.1 CABZ01085394.1 0 1 - - - - 1.000 - - - -
85. si:ch73-366i20.1_1 ENSDARG00000092949 1 1 - - 1.000 - - - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
86. zgc:165453 ENSDARG00000078183 3 1 - - - - - 1.000 - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
87. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - 1.000 - - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
88. ccdc14 ENSDARG00000098734 3 1 - - - - 1.000 - - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
89. ccdc79 2 1 - - - - - - - 1.000 - coiled-coil domain containing 79
90. cyp2n13 ENSDARG00000042953 10 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
91. XYLT2 ENSDARG00000059557 1 1 - - - - 1.000 - - - - xylosyltransferase II [Source:ZFIN;Acc:ZDB-GENE-081022-125]
92. CDHR5 CDHR5 2 1 - - - - 1.000 - - - -
93. ptx4 ENSDARG00000038072 2 1 - - - - - - - 1.000 - pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
94. SLC25A22_1 SLC25A22_1 3 1 - - - - 1.000 - - - -
95. si:dkey-52j6.1 si:dkey-52j6.1 3 1 - - - - 1.000 - - - -
96. guca1e ENSDARG00000101567 2 1 - - 1.000 - - - - - - guanylate cyclase activator 1e [Source:ZFIN;Acc:ZDB-GENE-040426-1577]
97. CU570691.1 ENSDARG00000088908 5 1 - - - - 1.000 - - - -
98. si:dkey-54j5.1 si:dkey-54j5.1 4 1 - - 1.000 - - - - - -
99. BX005294.2 ENSDARG00000109361 3 1 - - - - - 1.000 - - -
100. ftr56 ENSDARG00000030954 23 1 - - - - - - - 1.000 - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]

There are 775 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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