Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sh3kbp1

Gene Name Gene ID Reads Annotation
sh3kbp1 ENSDARG00000075853 2838 SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]










Genes with expression patterns similar to sh3kbp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sh3kbp1 ENSDARG00000075853 2838 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]
2. ndufaf4 ENSDARG00000077859 552 2.36 - 0.799 - 0.834 - - 0.727 - - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:ZFIN;Acc:ZDB-GENE-060810-114]
3. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.726 - - - - 0.999 - 0.727 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
4. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1.718 - - - - 1.000 - 0.718 - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
5. uba52 ENSDARG00000041435 50415 1.667 - - - - 0.959 - 0.708 - - ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
6. mrps34 ENSDARG00000057910 2007 1.618 - 0.775 - - - - 0.843 - - mitochondrial ribosomal protein S34 [Source:ZFIN;Acc:ZDB-GENE-041114-71]
7. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.598 - 0.780 - 0.818 - - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
8. gipc1 ENSDARG00000104483 2913 1.597 - 0.857 - 0.740 - - - - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
9. lrrc8c ENSDARG00000099911 1499 1.596 - - - - - - 0.754 0.842 - leucine rich repeat containing 8 VRAC subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2965]
10. egln1 egln1 3746 1.594 - 0.811 - - - - 0.783 - -
11. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.594 - - - 0.817 - - - - 0.777 ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
12. NOP14 ENSDARG00000098859 1288 1.578 - 0.798 - - - - 0.780 - - NOP14 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9691]
13. foxd2 ENSDARG00000058133 1150 1.572 - 0.817 - - - - 0.755 - - forkhead box D2 [Source:ZFIN;Acc:ZDB-GENE-980605-6]
14. BCKDHB ENSDARG00000014676 3725 1.57 - 0.760 - - - - 0.810 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
15. mcamb ENSDARG00000005368 1660 1.567 - 0.768 - - - - 0.799 - - melanoma cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030219-213]
16. anapc7 ENSDARG00000063005 1139 1.567 - 0.708 - 0.859 - - - - - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
17. polr1d ENSDARG00000037570 860 1.566 - 0.846 - - - - 0.720 - - RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
18. mrps35 ENSDARG00000038456 1514 1.553 - 0.774 - - - - 0.779 - - mitochondrial ribosomal protein S35 [Source:ZFIN;Acc:ZDB-GENE-050809-131]
19. rab23 ENSDARG00000004151 1077 1.55 - 0.761 - 0.789 - - - - - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
20. wu:fb30e12 wu:fb30e12 1254 1.54 - 0.804 - 0.736 - - - - -
21. CU633775.1 ENSDARG00000113543 319 1.537 - - - 0.810 - - - - 0.727
22. vps26b ENSDARG00000015823, ENSDARG00000116682 1023 1.536 - 0.707 - 0.829 - - - - - VPS26, retromer complex component B [Source:ZFIN;Acc:ZDB-GENE-040426-2699]
23. si:ch211-89f7.1 si:ch211-89f7.1 699 1.517 - - - - - - - 0.753 0.764
24. CABZ01080568.2 CABZ01080568.2 2137 1.495 - 0.773 - 0.722 - - - - -
25. eif4a2 ENSDARG00000016477 665 1.492 - 0.742 - 0.750 - - - - - eukaryotic translation initiation factor 4A, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2802]
26. tex10 ENSDARG00000055885 1229 1.489 0.702 - - - - - 0.787 - - testis expressed 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2827]
27. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 1.487 - - - - - 0.735 0.752 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
28. lgals2a ENSDARG00000054942 888 1.486 - - - - - 0.757 0.729 - - lectin, galactoside-binding, soluble, 2a [Source:ZFIN;Acc:ZDB-GENE-050318-2]
29. hsc70 ENSDARG00000012381 961 1.483 - - - - - 0.768 0.715 - - heat shock cognate 70 [Source:ZFIN;Acc:ZDB-GENE-040426-1221]
30. CR925880.1 CR925880.1 196 1.483 - 0.715 - - - 0.768 - - -
31. coq2 ENSDARG00000059510 505 1.473 - - - 0.703 - - 0.770 - - coenzyme Q2 4-hydroxybenzoate polyprenyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-84]
32. SNCAIP ENSDARG00000100198 522 1.472 0.709 - - 0.763 - - - - - synuclein, alpha interacting protein [Source:ZFIN;Acc:ZDB-GENE-080204-71]
33. ephb4b ENSDARG00000027112 633 1.469 - 0.707 - - - - - - 0.762 eph receptor B4b [Source:ZFIN;Acc:ZDB-GENE-990415-65]
34. p2rx5 ENSDARG00000004455, ENSDARG00000112664 309 1.468 0.710 - - - - 0.758 - - - purinergic receptor P2X, ligand-gated ion channel, 5 [Source:ZFIN;Acc:ZDB-GENE-030319-5]
35. si:dkey-71d15.2 ENSDARG00000094753 155 1.463 - - - - - 0.739 0.724 - - si:dkey-71d15.2 [Source:ZFIN;Acc:ZDB-GENE-050309-272]
36. ell2 ENSDARG00000006251 2895 1.46 - - - - - 0.709 0.751 - - elongation factor, RNA polymerase II, 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1717]
37. zgc:92518 ENSDARG00000016343 3837 1.459 - - - - - 0.703 0.756 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
38. BX927290.1 BX927290.1 389 1.452 0.720 - - 0.732 - - - - -
39. C8H22orf39 C8H22orf39 1236 1.446 - - - - - - 0.717 - 0.729
40. MRPL55 MRPL55 1711 1.443 - 0.703 - - - - 0.740 - -
41. slc37a4b ENSDARG00000077180, ENSDARG00000093531 565 1.443 - - - 0.742 - - 0.701 - - solute carrier family 37 (glucose-6-phosphate transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-827]
42. aspg ENSDARG00000052942 1406 1.442 - 0.705 - - - - - - 0.737 asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
43. dnajb13 ENSDARG00000043157 50 1.422 - 0.715 - - - - - - 0.707 DnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
44. enah ENSDARG00000032049 1526 1.419 - - - - - 0.700 0.719 - - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
45. grem2 grem2 743 1.417 - - - - - 0.702 0.715 - -
46. fbxo8 ENSDARG00000007477 603 1.408 - 0.702 - - - - 0.706 - - F-box protein 8 [Source:ZFIN;Acc:ZDB-GENE-060421-7091]
47. ncalda ENSDARG00000070688 5069 1 - - - - 1.000 - - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
48. mrps25 ENSDARG00000041306 3654 1 - - - - 1.000 - - - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
49. nip7 ENSDARG00000059075 3964 1 - - - - 1.000 - - - - NIP7, nucleolar pre-rRNA processing protein [Source:ZFIN;Acc:ZDB-GENE-050522-256]
50. C25H1orf51 C25H1orf51 2460 1 - - - - 1.000 - - - -
51. six3b ENSDARG00000054879 2416 1 - - - - 1.000 - - - - SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
52. acyp1 ENSDARG00000060126 2161 1 - - - - 1.000 - - - - acylphosphatase 1, erythrocyte (common) type [Source:ZFIN;Acc:ZDB-GENE-050309-125]
53. snap25a ENSDARG00000020609 4537 1 - - - - 1.000 - - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
54. pcgf6 ENSDARG00000069681 2382 1 - - - - 1.000 - - - - polycomb group ring finger 6 [Source:ZFIN;Acc:ZDB-GENE-060526-178]
55. si:dkey-191j3.3 si:dkey-191j3.3 1987 1 - - - - 1.000 - - - -
56. taf9 ENSDARG00000077870 6992 1 - - - - 1.000 - - - - TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
57. nrp2a_1 ENSDARG00000096546 3358 1 - - - - 1.000 - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
58. tegt ENSDARG00000077934 27182 0.999 - - - - 0.999 - - - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
59. ptprnb ENSDARG00000077047 2743 0.999 - - - - 0.999 - - - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
60. furina ENSDARG00000062909, ENSDARG00000117158 6313 0.999 - - - - 0.999 - - - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
61. ppp5c ENSDARG00000034313 8794 0.999 - - - - 0.999 - - - - protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
62. phgdh ENSDARG00000001873 8325 0.999 - - - - 0.999 - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
63. rbb4 rbb4 15541 0.998 - - - - 0.998 - - - -
64. anxa1a ENSDARG00000026726 23173 0.998 - - - - 0.998 - - - - annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
65. atp5h 18018 0.997 - - - - 0.997 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
66. uqcrq ENSDARG00000029064, ENSDARG00000116372 32190 0.997 - - - - 0.997 - - - - ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
67. FOXK2 ENSDARG00000030583 5500 0.997 - - - - 0.997 - - - - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
68. anp32b ENSDARG00000023330 25013 0.995 - - - - 0.995 - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
69. vps35 ENSDARG00000008224 13245 0.992 - - - - 0.992 - - - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
70. zgc:158409 zgc:158409 21963 0.991 - - - - 0.991 - - - -
71. fbxo28 ENSDARG00000027159 9602 0.99 - - - - 0.990 - - - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
72. sap130a ENSDARG00000056924 3156 0.989 - - - - 0.989 - - - - Sin3A-associated protein a [Source:ZFIN;Acc:ZDB-GENE-070615-5]
73. znf706 ENSDARG00000056307 12518 0.989 - - - - 0.989 - - - - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
74. atp5g1 51897 0.978 - - - - 0.978 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
75. rpl27 ENSDARG00000015128 108038 0.978 - - - - 0.978 - - - - ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
76. capns1b ENSDARG00000013804 37726 0.973 - - - - 0.973 - - - - calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
77. zgc:92533 zgc:92533 141172 0.949 - - - - 0.949 - - - -
78. ccnd1 ENSDARG00000101637 34762 0.944 - - - - 0.944 - - - - cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
79. rps15a ENSDARG00000010160 94499 0.922 - - - - 0.922 - - - - ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
80. ppiaa ENSDARG00000009212 290634 0.911 - - - - 0.911 - - - - peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
81. WDR89 ENSDARG00000077265 322 0.907 - - - 0.907 - - - - - WD repeat domain 89 [Source:ZFIN;Acc:ZDB-GENE-090319-3]
82. mmp11b ENSDARG00000016718 1136 0.905 - - - 0.905 - - - - - matrix metallopeptidase 11b [Source:ZFIN;Acc:ZDB-GENE-070817-2]
83. brip1 ENSDARG00000074410, ENSDARG00000113993 501 0.897 - - - 0.897 - - - - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
84. CABZ01085858.1 CABZ01085858.1 355 0.892 - - - 0.892 - - - - -
85. col4a1 ENSDARG00000055009 3083 0.891 - - - - - - 0.891 - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
86. ZNF710 ZNF710 766 0.891 - - - - - - - 0.891 -
87. orc1 ENSDARG00000039217, ENSDARG00000115400 795 0.89 - 0.890 - - - - - - - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
88. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 0.889 - - - - - - - 0.889 - zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
89. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 0.887 - - - 0.887 - - - - - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
90. FBXL3 FBXL3 1769 0.885 - - - 0.885 - - - - -
91. hdac1 ENSDARG00000015427 19804 0.885 - - - - 0.885 - - - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
92. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 0.88 - - - 0.880 - - - - - patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
93. par1 par1 564 0.878 - - - - - - 0.878 - -
94. galnt2 ENSDARG00000003829 891 0.878 - - - 0.878 - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041111-110]
95. atp6ap1a ENSDARG00000041417 898 0.878 - - - 0.878 - - - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
96. phf10 ENSDARG00000070084 1210 0.877 - - - 0.877 - - - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
97. taf1 ENSDARG00000035330 912 0.875 - - - 0.875 - - - - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
98. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.874 - - - 0.874 - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
99. kdm2aa ENSDARG00000059653 2389 0.872 - 0.872 - - - - - - - lysine (K)-specific demethylase 2Aa [Source:ZFIN;Acc:ZDB-GENE-061215-144]
100. cyr61 ENSDARG00000023062 1213 0.872 - - - 0.872 - - - - - cysteine-rich, angiogenic inducer, 61 [Source:ZFIN;Acc:ZDB-GENE-040426-3]

There are 1227 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA