Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sh3d19_1

Gene Name Gene ID Reads Annotation
sh3d19_1 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 90 SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]










Genes with expression patterns similar to sh3d19_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sh3d19_1 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 90 5 1.000 - 1.000 - 1.000 1.000 - - 1.000 SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
2. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 1.967 0.970 - - - - 0.997 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
3. PRSS23 ENSDARG00000055786 564 1.933 0.965 - - - - 0.968 - - - serine protease 23 [Source:ZFIN;Acc:ZDB-GENE-030131-9149]
4. smim8 ENSDARG00000071040 622 1.919 0.942 - - - - 0.977 - - - small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
5. ck2b ck2b 781 1.882 0.958 - - - - 0.924 - - -
6. tmem180 tmem180 430 1.873 0.966 - - - - 0.907 - - -
7. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.836 0.906 - - - - 0.930 - - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
8. trim55b ENSDARG00000058158 586 1.819 0.874 - - - - 0.945 - - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
9. adamts1 ENSDARG00000103519 539 1.803 0.827 - - - - 0.976 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 1 [Source:ZFIN;Acc:ZDB-GENE-070814-1]
10. CABZ01057013.1 CABZ01057013.1 1308 1.78 0.881 - - - - 0.899 - - -
11. sft2d3 ENSDARG00000070284 351 1.761 0.972 - - - 0.789 - - - - SFT2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070907-1]
12. me3 ENSDARG00000002305 3305 1.756 0.966 - - - - 0.790 - - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
13. gpx7 ENSDARG00000091511 3045 1.75 0.905 - - - - 0.845 - - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
14. NBEAL1 ENSDARG00000099547 1112 1.724 0.904 - - - - 0.820 - - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
15. dvl2 ENSDARG00000056184 1525 1.72 0.888 - - - - 0.832 - - - dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
16. s100z ENSDARG00000038729 442 1.717 0.822 - - - - 0.895 - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
17. FUCA1 FUCA1 1446 1.716 0.957 - - - - 0.759 - - -
18. cdkn2c ENSDARG00000057610 179 1.71 - - - - - 0.954 - - 0.756 cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
19. ccdc173 ENSDARG00000077928 260 1.707 - - - - 0.708 0.999 - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
20. bc2 5213 1.704 0.794 - - - - 0.910 - - - putative breast adenocarcinoma marker
21. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 1.694 0.918 - - - - 0.776 - - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
22. PVRL4_1 PVRL4_1 702 1.694 0.847 - - - - 0.847 - - -
23. degs2 ENSDARG00000042544 1912 1.691 0.838 - - - - 0.853 - - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
24. MYOF ENSDARG00000006112 436 1.682 - - - - 0.704 0.978 - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
25. itgb4 ENSDARG00000028507 2568 1.678 0.970 - - - - 0.708 - - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
26. si:ch73-173m3.3 si:ch73-173m3.3 425 1.668 - - - - - 0.911 - - 0.757
27. stk10 ENSDARG00000101894 1587 1.664 0.732 - - - - 0.932 - - - serine/threonine kinase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1136]
28. frmd6 ENSDARG00000002332 2698 1.648 0.838 - - - - 0.810 - - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
29. sigmar1 ENSDARG00000011418 1240 1.62 0.818 - - - - 0.802 - - - sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]
30. zgc:100918 ENSDARG00000087243 5451 1.585 0.866 - - - - 0.719 - - - zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
31. med6 ENSDARG00000034734 2711 1.526 0.795 - - - - 0.731 - - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
32. si:ch211-232i5.3 ENSDARG00000086874 1256 1.501 0.786 - - - - 0.715 - - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
33. si:dkey-57h18.2 33 0.999 - - - - - 0.999 - - - si:dkey-57h18.2, transcript variant X1
34. zgc:110286 92 0.999 - - - - - 0.999 - - - zgc:110286
35. si:dkey-115f9.2 si:dkey-115f9.2 18 0.999 - - - - - 0.999 - - -
36. TDRD15 TDRD15 46 0.999 - - - - - 0.999 - - -
37. CIR1 ENSDARG00000099733 66 0.999 - - - - - 0.999 - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
38. ankrd39 ENSDARG00000041350 73 0.999 - - - - - 0.999 - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
39. bace2 ENSDARG00000044781 17 0.999 - - - - - 0.999 - - - beta-secretase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-68]
40. slc6a19b ENSDARG00000056719 140 0.999 - - - - - 0.999 - - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
41. CR759816.1 ENSDARG00000098977 27 0.999 - - - - - 0.999 - - -
42. rhoab ENSDARG00000094673 26 0.998 - - - - - 0.998 - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
43. pcgf5b ENSDARG00000052388 163 0.998 - - - - - 0.998 - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
44. egr3 ENSDARG00000089156 71 0.998 - - - - - 0.998 - - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
45. CU929417.2 CU929417.2 94 0.998 - - - - - 0.998 - - -
46. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.998 - - - - - 0.998 - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
47. tph2 ENSDARG00000057239, ENSDARG00000109777 55 0.998 - - - - - 0.998 - - - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
48. crybb3 ENSDARG00000041301 48 0.998 - - - - - 0.998 - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
49. ZC3H11A ENSDARG00000009754 281 0.997 - - - - - 0.997 - - - zinc finger CCCH-type containing 11A [Source:ZFIN;Acc:ZDB-GENE-030131-3272]
50. CR759791.3 CR759791.3 134 0.997 - - - - - 0.997 - - -
51. CABZ01072083.1 CABZ01072083.1 56 0.997 - - - - - 0.997 - - -
52. si:ch211-105d18.6 si:ch211-105d18.6 59 0.997 - - - - - 0.997 - - -
53. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.997 - - - - - 0.997 - - - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
54. CU302436.3 CU302436.3 174 0.997 - - - - - 0.997 - - -
55. CU929328.1 ENSDARG00000105332 31 0.997 - - - - - 0.997 - - -
56. inhbab ENSDARG00000024759 29 0.997 - - - - - 0.997 - - - inhibin subunit beta Ab [Source:ZFIN;Acc:ZDB-GENE-050525-2]
57. znf750 ENSDARG00000102267 327 0.996 - - - - - 0.996 - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
58. SLC22A15 ENSDARG00000055445 111 0.996 - - - - - 0.996 - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
59. traf2b ENSDARG00000101036 429 0.996 - - - - - 0.996 - - - Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
60. slco2a1 ENSDARG00000061896 58 0.996 - - - - - 0.996 - - - solute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
61. tmem53 ENSDARG00000038789 411 0.995 - - - - - 0.995 - - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
62. RECQL4 ENSDARG00000077516 462 0.995 - - - - - 0.995 - - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
63. si:ch211-207c6.14 si:ch211-207c6.14 19 0.995 - - - - - 0.995 - - -
64. sez6a ENSDARG00000100876 35 0.995 - - - - - 0.995 - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
65. fosb ENSDARG00000055751 170 0.994 - - - - - 0.994 - - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
66. sc:d0139 sc:d0139 233 0.994 - - - - - 0.994 - - -
67. sowahcb ENSDARG00000059582 178 0.994 - - - - - 0.994 - - - sosondowah ankyrin repeat domain family Cb [Source:ZFIN;Acc:ZDB-GENE-061215-96]
68. si:zfos-364h11.1 99 0.993 - - - - - 0.993 - - - si:zfos-364h11.1, transcript variant X4
69. GDPD2 ENSDARG00000073870 229 0.993 - - - - - 0.993 - - - glycerophosphodiester phosphodiesterase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081107-62]
70. si:dkey-240e12.6 ENSDARG00000110137 674 0.993 - - - - - 0.993 - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
71. CCDC64B CCDC64B 337 0.992 - - - - - 0.992 - - -
72. lygl1 ENSDARG00000056874 309 0.992 0.992 - - - - - - - - lysozyme g-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-461]
73. mesdc2 776 0.992 - - - - - 0.992 - - - mesoderm development candidate 2, transcript variant X2
74. ngly1 ENSDARG00000003205 733 0.991 - - - - - 0.991 - - - N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
75. col17a1b ENSDARG00000079011 143 0.991 - - - - - 0.991 - - - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
76. ccnt2a ENSDARG00000036685 168 0.991 - - - - - 0.991 - - - cyclin T2a [Source:ZFIN;Acc:ZDB-GENE-030131-5779]
77. AC024175.9 AC024175.9 56 0.99 - - - - - 0.990 - - -
78. ube2j1 ENSDARG00000033489 497 0.99 - - - - - 0.990 - - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
79. FYCO1 FYCO1 194 0.989 - - - - - 0.989 - - -
80. rab9a ENSDARG00000045027 201 0.989 - - - - - 0.989 - - - RAB9A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-293]
81. slc12a9 ENSDARG00000060366 293 0.989 - - - - - 0.989 - - - solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
82. wdr91 ENSDARG00000015153 388 0.989 0.989 - - - - - - - - WD repeat domain 91 [Source:ZFIN;Acc:ZDB-GENE-050113-2]
83. rprd2a ENSDARG00000058089 743 0.988 - - - - - 0.988 - - - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
84. GCNT7 ENSDARG00000040608 91 0.988 - - - - - 0.988 - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:ZFIN;Acc:ZDB-GENE-120919-3]
85. gdap1l1 ENSDARG00000028628 233 0.988 - - - - - 0.988 - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
86. C13H4orf32 C13H4orf32 174 0.988 - - - - - 0.988 - - -
87. mc5ra ENSDARG00000031348 70 0.988 - - - - - 0.988 - - - melanocortin 5a receptor [Source:ZFIN;Acc:ZDB-GENE-021223-3]
88. dre-mir-429b ENSDARG00000082968 212 0.988 - - - - - 0.988 - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
89. pho ENSDARG00000035133 670 0.987 0.987 - - - - - - - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
90. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 0.987 - - - - - 0.987 - - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
91. fitm2 ENSDARG00000034568, ENSDARG00000112035 1717 0.987 - - - - - 0.987 - - - fat storage-inducing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-050508-5]
92. selj 884 0.986 - - - - - 0.986 - - - selenoprotein J
93. evi5b ENSDARG00000070839 239 0.986 - - - - - 0.986 - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
94. nek1 ENSDARG00000022350 158 0.985 0.985 - - - - - - - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
95. PCSK6 ENSDARG00000104574 710 0.985 - - - - - 0.985 - - - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
96. TMEM55B TMEM55B 76 0.985 0.985 - - - - - - - -
97. psmg2 ENSDARG00000035987 1938 0.985 - - - - - 0.985 - - - proteasome (prosome, macropain) assembly chaperone 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1972]
98. CU468896.2 CU468896.2 38 0.985 0.985 - - - - - - - -
99. rnf152 ENSDARG00000087782 141 0.985 0.985 - - - - - - - - ring finger protein 152 [Source:ZFIN;Acc:ZDB-GENE-050327-84]
100. lyst ENSDARG00000008575, ENSDARG00000113634 55 0.985 0.985 - - - - - - - - lysosomal trafficking regulator [Source:ZFIN;Acc:ZDB-GENE-070702-1]

There are 1040 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA