Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sh3d19

Gene Name Gene ID Reads Annotation
sh3d19 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 340 SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]










Genes with expression patterns similar to sh3d19

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sh3d19 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 340 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
2. hoxd13a ENSDARG00000059256 1190 2.212 0.731 0.747 - - - - 0.734 - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
3. fam26e fam26e 211 1.774 - - - 0.930 - - 0.844 - -
4. rft1 ENSDARG00000060398 146 1.724 - 0.832 - 0.892 - - - - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
5. FAM109B FAM109B 470 1.7 - 0.826 - 0.874 - - - - -
6. pum2 ENSDARG00000061040 207 1.615 - 0.726 - 0.889 - - - - - pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76]
7. mov10a ENSDARG00000015829 566 1.605 - - - 0.868 - 0.737 - - - Mov10 RISC complex RNA helicase a [Source:ZFIN;Acc:ZDB-GENE-091230-8]
8. fam65b 557 1.596 - - - 0.817 - - 0.779 - - family with sequence similarity 65, member B, transcript variant X4
9. nkiras2 ENSDARG00000052594 178 1.578 0.748 - - - - - 0.830 - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
10. GRAMD1C ENSDARG00000076238 795 1.574 - - - 0.845 - - 0.729 - - GRAM domain containing 1c [Source:ZFIN;Acc:ZDB-GENE-050506-88]
11. slc25a17 ENSDARG00000061684, ENSDARG00000116998 820 1.548 - - - - - 0.704 0.844 - - solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein), member 17 [Source:ZFIN;Acc:ZDB-GENE-070620-4]
12. AKAP13_1 ENSDARG00000079994 444 1.536 - 0.717 - - - - 0.819 - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
13. si:dkey-125i10.3 ENSDARG00000094760 908 1.536 - 0.723 - - - - 0.813 - - si:dkey-125i10.3 [Source:ZFIN;Acc:ZDB-GENE-060526-198]
14. cwf19l2 ENSDARG00000091760 1372 1.531 - 0.710 - 0.821 - - - - - CWF19-like 2, cell cycle control (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050913-1]
15. nudt2 ENSDARG00000058728 371 1.528 - 0.717 - 0.811 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
16. sytl2 sytl2 259 1.51 - 0.790 - - - - 0.720 - -
17. marveld2a ENSDARG00000025076 917 1.486 - - - 0.722 - - 0.764 - - MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]
18. brf1a ENSDARG00000017835 206 1.471 - 0.738 - - - - - 0.733 - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
19. sft2d1 ENSDARG00000007362 1763 1.47 - 0.749 - - - - 0.721 - - SFT2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1350]
20. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 1.465 - 0.724 - 0.741 - - - - - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
21. ttc26 ENSDARG00000012039 505 1.442 0.704 - - 0.738 - - - - - tetratricopeptide repeat domain 26 [Source:ZFIN;Acc:ZDB-GENE-041212-41]
22. LDLR LDLR 838 1.433 - - - - - - 0.733 0.700 -
23. CARD11 ENSDARG00000052741 249 0.962 - - - - - 0.962 - - - caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
24. itgb5 ENSDARG00000012942, ENSDARG00000114990 406 0.945 - - - 0.945 - - - - - integrin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6022]
25. fam43b ENSDARG00000070222 92 0.945 - - - 0.945 - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
26. olfm1a ENSDARG00000018270 107 0.945 - - - 0.945 - - - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
27. NAPB_1 NAPB_1 33 0.943 - - - 0.943 - - - - -
28. si:dkey-93l1.9 13 0.943 - - - 0.943 - - - - - si:dkey-93l1.9
29. BX324003.4 BX324003.4 24 0.943 - - - 0.943 - - - - -
30. grm2a ENSDARG00000004150 64 0.942 - - - 0.942 - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
31. trpa1b ENSDARG00000031875 39 0.941 - - - 0.941 - - - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
32. ddx59 ENSDARG00000022177, ENSDARG00000114618 205 0.94 - - - 0.940 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Source:ZFIN;Acc:ZDB-GENE-050208-665]
33. map3k3 ENSDARG00000060348 1482 0.94 - - - 0.940 - - - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
34. tmem187 ENSDARG00000051989 136 0.938 - - - 0.938 - - - - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
35. kcnip3b ENSDARG00000017880, ENSDARG00000109763 105 0.938 - - - 0.938 - - - - - Kv channel interacting protein 3b, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1752]
36. C24H16orf11 C24H16orf11 32 0.937 - - - 0.937 - - - - -
37. cdc42l2 ENSDARG00000057869, ENSDARG00000109454 181 0.936 - - - 0.936 - - - - - cell division cycle 42 like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-21]
38. xkr8.2 ENSDARG00000076820 51 0.935 - - - 0.935 - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
39. klc3 ENSDARG00000055965 116 0.934 - - - 0.934 - - - - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
40. rock2b ENSDARG00000004877, ENSDARG00000096433 135 0.934 - - - 0.934 - - - - - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
41. dnah9l ENSDARG00000062630 268 0.934 - - - 0.934 - - - - - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
42. zgc:111991 zgc:111991 159 0.931 - - - 0.931 - - - - -
43. si:dkey-192g7.3 ENSDARG00000094012 105 0.931 - - - 0.931 - - - - - si:dkey-192g7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-411]
44. ubox5 ENSDARG00000058563 161 0.931 - - - 0.931 - - - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
45. SPA17 ENSDARG00000069361 141 0.931 - - - 0.931 - - - - - sperm autoantigenic protein 17 [Source:ZFIN;Acc:ZDB-GENE-061027-337]
46. minal minal 383 0.929 - - - 0.929 - - - - -
47. phyh ENSDARG00000086740 88 0.929 - - - 0.929 - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
48. C12H17orf62_1 C12H17orf62_1 83 0.928 - - - 0.928 - - - - -
49. pcdh1gb9 ENSDARG00000088475 71 0.927 - - - 0.927 - - - - - protocadherin 1 gamma b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-18]
50. VSTM2B VSTM2B 149 0.925 - - - 0.925 - - - - -
51. si:ch211-139k8.2 143 0.925 - - - 0.925 - - - - - si:ch211-139k8.2, transcript variant X4
52. NRSN2 NRSN2 57 0.923 - - - 0.923 - - - - -
53. SNORA57 SNORA57 148 0.921 - - - 0.921 - - - - -
54. nos1apb ENSDARG00000058701 148 0.921 - - - 0.921 - - - - - nitric oxide synthase 1 (neuronal) adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-100824-1]
55. si:dkey-261e22.5 si:dkey-261e22.5 68 0.92 - - - 0.920 - - - - -
56. triqk ENSDARG00000076296 1274 0.918 - - - - - - 0.918 - - triple QxxK/R motif containing [Source:ZFIN;Acc:ZDB-GENE-070705-75]
57. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 0.918 - - - - - - 0.918 - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
58. SLC46A3 ENSDARG00000077313 162 0.916 - 0.916 - - - - - - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
59. zgc:162780 ENSDARG00000069548 340 0.916 - - - 0.916 - - - - - zgc:162780 [Source:ZFIN;Acc:ZDB-GENE-070410-92]
60. gmcl1 ENSDARG00000020948 261 0.916 - - - 0.916 - - - - - germ cell-less, spermatogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-865]
61. zgc:173994 zgc:173994 204 0.916 - - - 0.916 - - - - -
62. itprip ENSDARG00000015576 62 0.913 - - - 0.913 - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-050417-422]
63. psme3 ENSDARG00000012234, ENSDARG00000111284 113 0.913 - - - 0.913 - - - - - proteasome activator subunit 3 [Source:ZFIN;Acc:ZDB-GENE-991110-19]
64. lrrcc1 ENSDARG00000078535 118 0.911 - - - 0.911 - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
65. CABZ01064973.1 CABZ01064973.1 160 0.908 - - - 0.908 - - - - -
66. tmem222b ENSDARG00000104097 132 0.907 - - - 0.907 - - - - - transmembrane protein 222b [Source:ZFIN;Acc:ZDB-GENE-090303-4]
67. SLC27A3 SLC27A3 240 0.907 - - - 0.907 - - - - -
68. vgf ENSDARG00000105529 247 0.906 - - - 0.906 - - - - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
69. si:dkey-17e16.17 615 0.906 - - - 0.906 - - - - - si:dkey-17e16.17
70. tpi1a ENSDARG00000025012 562 0.905 - - - 0.905 - - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
71. dhrs13a.3 ENSDARG00000041137 271 0.904 - - - 0.904 - - - - - dehydrogenase/reductase (SDR family) member 13a, duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-041114-134]
72. ids ENSDARG00000071699 265 0.903 - - - 0.903 - - - - - iduronate 2-sulfatase [Source:ZFIN;Acc:ZDB-GENE-061215-37]
73. adhfe1 ENSDARG00000053518 499 0.903 - - - 0.903 - - - - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
74. si:dkey-20i20.2 ENSDARG00000071719 659 0.903 - 0.903 - - - - - - - si:dkey-20i20.2 [Source:ZFIN;Acc:ZDB-GENE-060503-528]
75. myo6b ENSDARG00000042141 349 0.901 - - - 0.901 - - - - - myosin VIb [Source:ZFIN;Acc:ZDB-GENE-030318-3]
76. parp6a ENSDARG00000042703 112 0.9 - - - 0.900 - - - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
77. zbtb8os ENSDARG00000016368 284 0.899 - - - 0.899 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:ZFIN;Acc:ZDB-GENE-050417-176]
78. CABZ01072096.1 ENSDARG00000079483 168 0.898 - - - 0.898 - - - - -
79. C7H11orf68 C7H11orf68 446 0.898 - - - 0.898 - - - - -
80. ftsjd1 ftsjd1 137 0.898 - - - 0.898 - - - - -
81. jmjd7 ENSDARG00000035546 222 0.898 - - - 0.898 - - - - - jumonji domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-050417-86]
82. zgc:110224 ENSDARG00000032263 147 0.897 - - - - - 0.897 - - - zgc:110224 [Source:ZFIN;Acc:ZDB-GENE-050417-120]
83. ndp ENSDARG00000076569 120 0.894 - - - 0.894 - - - - - Norrie disease (pseudoglioma) [Source:ZFIN;Acc:ZDB-GENE-060216-2]
84. C13H10orf11 1209 0.893 - - - 0.893 - - - - - c13h10orf11 homolog (H. sapiens), transcript variant X2
85. gabpb2b ENSDARG00000054344, ENSDARG00000109958 238 0.891 - - - 0.891 - - - - - GA binding protein transcription factor subunit beta 2b [Source:ZFIN;Acc:ZDB-GENE-050208-136]
86. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 0.89 - 0.890 - - - - - - - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
87. zgc:64002 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 170 0.89 - - - 0.890 - - - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
88. C5H9orf16 C5H9orf16 743 0.89 - - - 0.890 - - - - -
89. lypd6 ENSDARG00000004307 233 0.889 - - - 0.889 - - - - - LY6/PLAUR domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-040912-117]
90. fam110b ENSDARG00000088073 420 0.889 - - - 0.889 - - - - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
91. vgll4l ENSDARG00000068409, ENSDARG00000110132 844 0.889 - - - - - 0.889 - - - vestigial like 4 like [Source:ZFIN;Acc:ZDB-GENE-070112-1682]
92. si:ch211-193k19.2 ENSDARG00000077572 35 0.888 - - - 0.888 - - - - - si:ch211-193k19.2 [Source:ZFIN;Acc:ZDB-GENE-060503-203]
93. chrna2b ENSDARG00000057025 217 0.888 - - - 0.888 - - - - - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
94. rhbdd2 ENSDARG00000092463 937 0.887 - - - 0.887 - - - - - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
95. ARX ARX 71 0.887 - - - 0.887 - - - - -
96. si:ch211-214b16.4 ENSDARG00000074345 261 0.886 - - - - - - 0.886 - - si:ch211-214b16.4 [Source:ZFIN;Acc:ZDB-GENE-081105-53]
97. pkn3 ENSDARG00000079585 521 0.886 - - - - - 0.886 - - - protein kinase N3 [Source:ZFIN;Acc:ZDB-GENE-030131-1902]
98. klhl22 ENSDARG00000088807 324 0.885 - - - 0.885 - - - - - kelch-like family member 22 [Source:ZFIN;Acc:ZDB-GENE-081104-154]
99. FHDC1_2 FHDC1_2 133 0.884 - - - 0.884 - - - - -
100. B4GALNT1 B4GALNT1 352 0.882 - - - 0.882 - - - - -

There are 693 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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