Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sh3bp4

Gene Name Gene ID Reads Annotation
sh3bp4 ENSDARG00000030104, ENSDARG00000109621 51 SH3-domain binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-509]










Genes with expression patterns similar to sh3bp4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sh3bp4 ENSDARG00000030104, ENSDARG00000109621 51 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SH3-domain binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-509]
2. cd74a ENSDARG00000009087 20 2.404 0.802 - 0.752 - - - 0.850 - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
3. si:ch211-273j9.2 si:ch211-273j9.2 79 2.27 0.802 0.765 - - - - 0.703 - -
4. TMEM27 TMEM27 261 1.87 0.916 - - - - - 0.954 - -
5. fhl2b ENSDARG00000003991 32 1.864 1.000 - - - - - 0.864 - - four and a half LIM domains 2b [Source:ZFIN;Acc:ZDB-GENE-041010-121]
6. ptx3b ENSDARG00000079515 10 1.819 0.959 - - - - - 0.860 - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
7. si:ch73-386o14.1 si:ch73-386o14.1 82 1.771 0.802 - - - - - 0.969 - -
8. irf7 ENSDARG00000045661 76 1.715 - 0.815 - - - - 0.900 - - interferon regulatory factor 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1518]
9. TNFRSF11B ENSDARG00000098377 98 1.698 0.802 - - - - - 0.896 - - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
10. tmc4 ENSDARG00000031757 30 1.685 0.802 - - - - - 0.883 - - transmembrane channel-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7489]
11. si:dkey-147f3.8 ENSDARG00000092166 28 1.675 - 0.793 - - - - 0.882 - - si:dkey-147f3.8 [Source:ZFIN;Acc:ZDB-GENE-061009-32]
12. si:dkey-211g8.6 ENSDARG00000063088 19 1.652 0.802 - - - - - 0.850 - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
13. ppm1na ENSDARG00000010231 3 1.652 0.802 - - - - - 0.850 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
14. HEATR2_1 HEATR2_1 166 1.639 - 0.900 - - - - 0.739 - -
15. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 1.631 0.802 0.829 - - - - - - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
16. CR854948.2 CR854948.2 4 1.62 - - 0.817 - - - 0.803 - -
17. cabp4 ENSDARG00000008866 4 1.619 0.802 0.817 - - - - - - - calcium binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-291]
18. si:dkey-104n9.1 ENSDARG00000093042 41 1.601 - - - - - 0.751 0.850 - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
19. rprmb ENSDARG00000024006 120 1.598 - 0.847 - - - 0.751 - - - reprimo, TP53 dependent G2 arrest mediator candidate b [Source:ZFIN;Acc:ZDB-GENE-040426-1779]
20. si:ch211-196n4.5 si:ch211-196n4.5 63 1.583 - - - - - 0.751 0.832 - -
21. SLC5A8 ENSDARG00000087120 60 1.576 - 0.864 - - 0.712 - - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-141211-63]
22. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1.568 - 0.817 - - - 0.751 - - - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
23. elna 38 1.564 - 0.847 - - - 0.717 - - - elastin a, transcript variant X20
24. GPC6_1 GPC6_1 34 1.56 - - 0.735 - - 0.825 - - -
25. prlrb ENSDARG00000045955 12 1.553 0.802 - - - - 0.751 - - - prolactin receptor b [Source:ZFIN;Acc:ZDB-GENE-070705-155]
26. si:dkeyp-86f8.2 si:dkeyp-86f8.2 5 1.553 0.802 - - - - 0.751 - - -
27. hsd3b1 ENSDARG00000069926 35 1.553 0.802 - - - - 0.751 - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
28. nog1 ENSDARG00000058819 501 1.522 - 0.754 - - - - 0.768 - - noggin 1 [Source:ZFIN;Acc:ZDB-GENE-991206-8]
29. zgc:194275 ENSDARG00000074014 130 1.504 - 0.753 - - - 0.751 - - - zgc:194275 [Source:ZFIN;Acc:ZDB-GENE-081022-92]
30. kcnab2b ENSDARG00000062134 80 1.489 - - - - 0.731 - 0.758 - - potassium voltage-gated channel, shaker-related subfamily, beta member 2 b [Source:ZFIN;Acc:ZDB-GENE-080219-36]
31. s1pr5b ENSDARG00000052192 52 1.476 - 0.725 - - - 0.751 - - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
32. capslb ENSDARG00000003414 77 1.468 0.751 0.717 - - - - - - - calcyphosine-like b [Source:ZFIN;Acc:ZDB-GENE-050417-298]
33. egfl7 ENSDARG00000100657 776 1.441 0.714 - - - - - 0.727 - - EGF-like-domain, multiple 7 [Source:ZFIN;Acc:ZDB-GENE-040429-2]
34. tie1 ENSDARG00000004105 400 1.434 0.701 - - - - - 0.733 - - tyrosine kinase with immunoglobulin-like and EGF-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-990415-55]
35. CU633988.1 CU633988.1 97 1 1.000 - - - - - - - -
36. LUZP1 ENSDARG00000075556 55 1 - - - - - - 1.000 - - leucine zipper protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-90]
37. GRAMD3 GRAMD3 4 1 - - - - - - 1.000 - -
38. C5H9orf171 C5H9orf171 34 1 - - - - - - 1.000 - -
39. mir92a-1 20 1 - - - - - 1.000 - - - microRNA 92a-1
40. elavl2 ENSDARG00000040732 44 1 - - - - - - 1.000 - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
41. si:ch211-113a14.19_2 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 17 1 1.000 - - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
42. opn1mw1 ENSDARG00000097008 9 1 - - - - - - 1.000 - - opsin 1 (cone pigments), medium-wave-sensitive, 1 [Source:ZFIN;Acc:ZDB-GENE-990604-42]
43. RCSD1 RCSD1 144 1 - - - - - - 1.000 - -
44. slc6a6b ENSDARG00000098438 7 1 - - - - - 1.000 - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
45. zgc:66483 ENSDARG00000099612 10 1 - - - - - - 1.000 - - zgc:66483 [Source:ZFIN;Acc:ZDB-GENE-030131-5765]
46. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - - - - - - 1.000 - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
47. josd1 ENSDARG00000071548, ENSDARG00000113255, ENSDARG00000115146 4 1 1.000 - - - - - - - - Josephin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-260]
48. rab11bb_1 ENSDARG00000090086 7 1 1.000 - - - - - - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
49. cldn10l2 ENSDARG00000105042 11 1 - - - - - - 1.000 - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
50. si:ch211-265g21.1 si:ch211-265g21.1 35 1 - - - - - - 1.000 - -
51. esr2b ENSDARG00000034181 20 1 - - - - - - 1.000 - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
52. si:ch73-222h13.1 ENSDARG00000087107 16 1 - - - - - - 1.000 - - si:ch73-222h13.1 [Source:ZFIN;Acc:ZDB-GENE-090313-144]
53. ccdc127a 39 1 - - - - - - 1.000 - - coiled-coil domain containing 127a, transcript variant X2
54. nxpe3 ENSDARG00000061690 60 1 1.000 - - - - - - - - neurexophilin and PC-esterase domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-061013-214]
55. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1 - - - - - 1.000 - - -
56. ptger4a ENSDARG00000059236 13 1 1.000 - - - - - - - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
57. si:dkey-242e21.3 ENSDARG00000075723 77 1 - - - - - - 1.000 - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
58. si:ch73-41e3.7 ENSDARG00000089799 911 1 - - - - - - 1.000 - - si:ch73-41e3.7 [Source:ZFIN;Acc:ZDB-GENE-090313-163]
59. TRHDE_1 TRHDE_1 102 1 - - - - - 1.000 - - -
60. si:ch73-167f18.3 si:ch73-167f18.3 78 1 - - - - - 1.000 - - -
61. vcpip1 ENSDARG00000060177 56 1 1.000 - - - - - - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
62. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1 - - - - - - 1.000 - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
63. PACRG ENSDARG00000087556 7 1 - - - - - - 1.000 - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
64. si:ch73-343l4.8 ENSDARG00000077975 4 1 - - - - - - 1.000 - - si:ch73-343l4.8 [Source:ZFIN;Acc:ZDB-GENE-090313-159]
65. oard1 ENSDARG00000057426, ENSDARG00000110693 42 1 1.000 - - - - - - - - O-acyl-ADP-ribose deacylase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-480]
66. si:dkey-105h11.2 13 1 - - - - - - 1.000 - - si:dkey-105h11.2
67. SYTL2 SYTL2 139 1 - - - - - - 1.000 - -
68. ccdc113 ENSDARG00000006981 67 0.996 - - - - - - 0.996 - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
69. lrriq1 ENSDARG00000093781 83 0.981 - - - - - - 0.981 - - leucine-rich repeats and IQ motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-235]
70. RUFY1 ENSDARG00000078685 114 0.98 - - - - - 0.980 - - - RUN and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-4]
71. AL954146.5 AL954146.5 202 0.973 - - - - - - 0.973 - -
72. aptx ENSDARG00000027143 87 0.97 - - - - - - 0.970 - - aprataxin [Source:ZFIN;Acc:ZDB-GENE-040628-2]
73. hk2 ENSDARG00000101482, ENSDARG00000116757 92 0.967 - - - - - - 0.967 - - hexokinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2017]
74. pcolce2a ENSDARG00000008450 22 0.967 - - - - - - 0.967 - - procollagen C-endopeptidase enhancer 2a [Source:ZFIN;Acc:ZDB-GENE-070705-25]
75. mirlet7a-6 15 0.967 - - - - - - 0.967 - - microRNA let7a-6
76. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 0.967 - - - - - - 0.967 - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
77. CHCHD4 CHCHD4 185 0.963 - - - - - - 0.963 - -
78. foxj1b ENSDARG00000088290 343 0.962 - - - - - - 0.962 - - forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]
79. CLDND1_1 CLDND1_1 50 0.959 0.959 - - - - - - - -
80. CCDC30 ENSDARG00000056961 178 0.947 - 0.947 - - - - - - - coiled-coil domain containing 30 [Source:ZFIN;Acc:ZDB-GENE-130530-667]
81. casz1 ENSDARG00000037030 85 0.946 0.946 - - - - - - - - castor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]
82. slc10a2 ENSDARG00000014916, ENSDARG00000112112 20 0.943 - - - - - - 0.943 - - solute carrier family 10 (sodium/bile acid cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1328]
83. si:dkey-225h23.4 si:dkey-225h23.4 7 0.943 - - - - - - 0.943 - -
84. CR848836.5 CR848836.5 42 0.943 - - - - - - 0.943 - -
85. rgs13 ENSDARG00000017653 8 0.943 - - - - - - 0.943 - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
86. CT583679.2 CT583679.2 10 0.943 - - - - - - 0.943 - -
87. avpr2ab ENSDARG00000029219 97 0.942 - - - - - - 0.942 - - arginine vasopressin receptor 2a, duplicate b [Source:ZFIN;Acc:ZDB-GENE-110411-48]
88. nt5e ENSDARG00000071017 18 0.941 - - - - - 0.941 - - - 5'-nucleotidase, ecto (CD73) [Source:ZFIN;Acc:ZDB-GENE-040426-1261]
89. C5H11orf88 C5H11orf88 280 0.935 - - - - - - 0.935 - -
90. dyx1c1 dyx1c1 36 0.935 - - - - - - 0.935 - -
91. capsla ENSDARG00000103521 277 0.934 - - - - - - 0.934 - - calcyphosine-like a [Source:ZFIN;Acc:ZDB-GENE-030131-7291]
92. KIF20B KIF20B 800 0.932 - 0.932 - - - - - - -
93. dzip1l ENSDARG00000074265 61 0.927 - - - - - - 0.927 - - DAZ interacting zinc finger protein 1-like [Source:ZFIN;Acc:ZDB-GENE-051113-196]
94. rabgef1l ENSDARG00000015968 38 0.926 - 0.926 - - - - - - - RAB guanine nucleotide exchange factor (GEF) 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-813]
95. slc9a3.1 ENSDARG00000058498 46 0.926 - - - - - - 0.926 - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
96. CR352265.1 ENSDARG00000062758 39 0.923 - - - - - - 0.923 - -
97. irx2a ENSDARG00000001785 262 0.921 0.921 - - - - - - - - iroquois homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1446]
98. hoxb6a ENSDARG00000010630 1106 0.918 - - - - - - 0.918 - - homeobox B6a [Source:ZFIN;Acc:ZDB-GENE-990415-106]
99. ZC3H12A ENSDARG00000005271 5 0.912 - - 0.912 - - - - - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
100. hnf4g ENSDARG00000071565 117 0.912 - - - - - - 0.912 - - hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100]

There are 1126 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA