Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sgms2

Gene Name Gene ID Reads Annotation
sgms2 57 sphingomyelin synthase 2, transcript variant X1










Genes with expression patterns similar to sgms2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sgms2 57 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sphingomyelin synthase 2, transcript variant X1
2. CABZ01038313.1 CABZ01038313.1 79 2.67 - 1.000 - - - 0.906 - 0.764 -
3. CR847906.1 ENSDARG00000099493 88 2.611 - 1.000 - - - 0.857 - 0.754 - protein NLRC3-like [Source:NCBI gene;Acc:571651]
4. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1.997 - 1.000 - - - 0.997 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
5. XKR7 ENSDARG00000026333 175 1.991 - 1.000 - - - 0.991 - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
6. atat1 ENSDARG00000004472 700 1.989 - 1.000 - - - 0.989 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
7. SSBP2 ENSDARG00000099727 22 1.986 - 1.000 - - - 0.986 - - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
8. PPFIA3 ENSDARG00000077053 310 1.982 - 1.000 - - - 0.982 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
9. KCNIP4 ENSDARG00000088100 86 1.979 - 1.000 - - - 0.979 - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
10. zgc:174697 zgc:174697 128 1.965 - 1.000 - - - 0.965 - - -
11. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.911 - 1.000 - - - 0.911 - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
12. bsk146 ENSDARG00000099069 274 1.897 - 1.000 - - - 0.897 - - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
13. CABZ01065506.1 CABZ01065506.1 204 1.887 - 1.000 - - - 0.887 - - -
14. syt9a ENSDARG00000003994 298 1.868 - 1.000 - - - 0.868 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
15. RGS9BP ENSDARG00000086756 65 1.858 - 1.000 - - - 0.858 - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
16. si:dkey-21o19.6 si:dkey-21o19.6 18 1.849 - 1.000 - - - 0.849 - - -
17. scin ENSDARG00000010728, ENSDARG00000111092 437 1.834 - 1.000 - - - 0.834 - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
18. hecw1 hecw1 241 1.827 - 0.888 - - - 0.939 - - -
19. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.821 - 0.900 - - - 0.921 - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
20. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.81 - 0.822 - - - 0.988 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
21. kif18a ENSDARG00000008022 546 1.805 - - - - - 0.921 0.884 - - kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
22. FAM163A ENSDARG00000093021 86 1.798 - 0.950 - - - 0.848 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
23. mapk8ip2 ENSDARG00000063157 467 1.784 - 0.861 - - - 0.923 - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
24. fstl3 ENSDARG00000025670 41 1.78 - - - - - 0.947 0.833 - - follistatin-like 3 (secreted glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-050913-111]
25. wars2 ENSDARG00000011801 134 1.776 - - - - - 0.954 - 0.822 - tryptophanyl tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050306-26]
26. DNAJC14 ENSDARG00000105398 20 1.771 - 1.000 - - - - - 0.771 - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
27. nrcam nrcam 397 1.759 - 1.000 - - - 0.759 - - -
28. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.757 - 1.000 - - - 0.757 - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
29. arf3a ENSDARG00000070539 29 1.753 - - - - - 0.993 - 0.760 - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
30. crabp2a_1 ENSDARG00000073978 888 1.743 - - 0.846 - - 0.897 - - - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
31. si:ch73-346o4.3 si:ch73-346o4.3 29 1.741 - 1.000 - - - - - 0.741 -
32. chst13 chst13 669 1.729 - - - - - 0.932 0.797 - -
33. cacnb4b ENSDARG00000062174 159 1.712 - 0.900 - - - 0.812 - - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
34. si:ch211-240g9.1 36 1.695 - 0.704 - - - 0.991 - - - si:ch211-240g9.1
35. p2rx8 ENSDARG00000024139 25 1.687 - - - - - 0.966 - - 0.721 purinergic receptor P2X, ligand-gated ion channel, 8 [Source:ZFIN;Acc:ZDB-GENE-030319-7]
36. SLC9B1 SLC9B1 137 1.669 - 0.704 - - - 0.965 - - -
37. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 1.654 - - - - - 0.798 0.856 - - inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
38. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.652 - 0.710 - - - 0.942 - - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
39. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.648 - 0.921 - - - 0.727 - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
40. thsd7ba ENSDARG00000095022 231 1.646 - 0.770 - - - 0.876 - - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
41. samd1b ENSDARG00000079062 280 1.631 - - - - - 0.832 0.799 - - sterile alpha motif domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-090313-2]
42. CABZ01061146.1 CABZ01061146.1 28 1.605 - - - - - 0.867 - 0.738 -
43. spata2 ENSDARG00000063250 501 1.603 - - - - - 0.853 0.750 - - spermatogenesis associated 2 [Source:ZFIN;Acc:ZDB-GENE-070822-5]
44. si:dkey-6f10.3 ENSDARG00000093660 116 1.6 - - - - - 0.812 0.788 - - si:dkey-6f10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-339]
45. B4GALNT1 B4GALNT1 352 1.596 - 0.753 - - - 0.843 - - -
46. arpc5la ENSDARG00000041720 143 1.581 - 0.789 - - - - 0.792 - - actin related protein 2/3 complex, subunit 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1453]
47. TTC9 ENSDARG00000074363 196 1.572 - 0.761 - - - 0.811 - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
48. fam110b ENSDARG00000088073 420 1.567 - - - - - 0.756 0.811 - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
49. scn1lab ENSDARG00000062744 155 1.557 - 0.731 - - - 0.826 - - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
50. wrnip1 ENSDARG00000005218 695 1.553 - 0.819 - - - - - 0.734 - Werner helicase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2415]
51. UIMC1_1 UIMC1_1 430 1.552 - - - - - 0.805 0.747 - -
52. utp3 ENSDARG00000056720 922 1.542 - - - - - 0.786 0.756 - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
53. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.533 - 0.754 - - - 0.779 - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
54. slc15a1a ENSDARG00000100315 23 1.526 - - - - - - 0.789 0.737 - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
55. atp1b4 ENSDARG00000053262 1337 1.518 - 0.764 - - - 0.754 - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
56. rapgef3 ENSDARG00000079291 69 1.513 - 0.761 - - - - 0.752 - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
57. atp2b3b ENSDARG00000023445 1424 1.462 - 0.716 - - - 0.746 - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
58. tnr ENSDARG00000020771 20 1.436 - 0.731 - - - - - 0.705 - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
59. ncana 1537 1.431 - - - - 0.715 0.716 - - - neurocan a
60. calml4a ENSDARG00000075800 14 1 - 1.000 - - - - - - - calmodulin-like 4a [Source:ZFIN;Acc:ZDB-GENE-081022-9]
61. nitr3a_1 ENSDARG00000110676 44 1 - 1.000 - - - - - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
62. Mar-09 Mar-09 126 1 - 1.000 - - - - - - -
63. si:dkey-3d4.1 si:dkey-3d4.1 37 1 - 1.000 - - - - - - -
64. CR762480.3 CR762480.3 3 1 - 1.000 - - - - - - -
65. tcf23 ENSDARG00000087381 6 1 - 1.000 - - - - - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
66. CU695076.1 CU695076.1 7 1 - 1.000 - - - - - - -
67. mir301c 84 1 - 1.000 - - - - - - - microRNA 301c
68. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1 - 1.000 - - - - - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
69. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1 - 1.000 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
70. si:ch211-263m18.4 ENSDARG00000093353 27 1 - 1.000 - - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
71. BX649415.4 BX649415.4 3 1 - 1.000 - - - - - - -
72. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 1 - 1.000 - - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
73. CT030048.2 CT030048.2 3 1 - 1.000 - - - - - - -
74. zgc:174153 ENSDARG00000079376 12007 1 - 1.000 - - - - - - - zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
75. si:dkey-11c5.14 si:dkey-11c5.14 15 1 - 1.000 - - - - - - -
76. igsf21b ENSDARG00000056084 6 1 - 1.000 - - - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
77. pag1 ENSDARG00000055875 21 1 - 1.000 - - - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
78. NACC1 NACC1 9 1 - 1.000 - - - - - - -
79. RAP1GAP ENSDARG00000056554, ENSDARG00000110356 288 1 - 1.000 - - - - - - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
80. SEMA6B SEMA6B 35 1 - 1.000 - - - - - - -
81. ZNF648 ENSDARG00000104823 194 1 - 1.000 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
82. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1 - 1.000 - - - - - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
83. nyx ENSDARG00000061791 2 1 - 1.000 - - - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
84. si:dkey-57a22.13 ENSDARG00000092345, ENSDARG00000116169 2 1 - 1.000 - - - - - - - si:dkey-57a22.13 [Source:ZFIN;Acc:ZDB-GENE-081104-425]
85. kcnj14 ENSDARG00000075914 38 1 - 1.000 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 14 [Source:ZFIN;Acc:ZDB-GENE-100922-48]
86. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - 1.000 - - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
87. dusp3b ENSDARG00000060130 3 1 - 1.000 - - - - - - - dual specificity phosphatase 3b [Source:ZFIN;Acc:ZDB-GENE-030616-38]
88. si:ch211-10j20.7 si:ch211-10j20.7 8 1 - 1.000 - - - - - - -
89. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - 1.000 - - - - - - -
90. spred3 ENSDARG00000040358 134 1 - 1.000 - - - - - - - sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]
91. selp ENSDARG00000042138, ENSDARG00000096787 3 1 - 1.000 - - - - - - - selectin P [Source:ZFIN;Acc:ZDB-GENE-110107-2]
92. si:dkey-31e10.5 ENSDARG00000070502 4 1 - 1.000 - - - - - - - si:dkey-31e10.5 [Source:ZFIN;Acc:ZDB-GENE-121214-76]
93. ptger1c ENSDARG00000078602, ENSDARG00000110042 2 1 - 1.000 - - - - - - - prostaglandin E receptor 1c (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120917-4]
94. ARX ARX 71 1 - 1.000 - - - - - - -
95. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 - 1.000 - - - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
96. BX005305.4 ENSDARG00000114385 6 1 - 1.000 - - - - - - - legumain [Source:NCBI gene;Acc:569153]
97. BTBD17 BTBD17 53 1 - 1.000 - - - - - - -
98. CABZ01087562.1 CABZ01087562.1 80 1 - 1.000 - - - - - - -
99. ccdc64 ccdc64 2 1 - 1.000 - - - - - - -
100. BX511006.2 BX511006.2 29 1 - 1.000 - - - - - - -

There are 1790 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA