Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sgms1

Gene Name Gene ID Reads Annotation
sgms1 ENSDARG00000029621 6376 sphingomyelin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-295]










Genes with expression patterns similar to sgms1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sgms1 ENSDARG00000029621 6376 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sphingomyelin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-295]
2. cenpf ENSDARG00000055133 5267 2.536 - 0.704 0.841 - - - 0.991 - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
3. col16a1 ENSDARG00000009194 5600 2.447 - - 0.804 - 0.811 0.832 - - - collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
4. ist1 ENSDARG00000051888 4536 1.882 - - - - - 0.896 0.986 - - increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
5. slc4a2b ENSDARG00000052330 1900 1.809 - - - - 0.818 - 0.991 - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
6. rnd3a ENSDARG00000076799 4705 1.802 - - - - 0.812 - 0.990 - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
7. CCNA2 ENSDARG00000011094 3996 1.72 - - - - 0.730 - 0.990 - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
8. sema3fa ENSDARG00000011163 759 1.701 - - 0.885 - 0.816 - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
9. notch2 ENSDARG00000043130 4430 1.674 - - - - 0.788 0.886 - - - notch 2 [Source:ZFIN;Acc:ZDB-GENE-000329-4]
10. fkbp8 ENSDARG00000001734 1709 1.578 - 0.716 0.862 - - - - - - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
11. RBM47 ENSDARG00000061985 2498 1.558 - - - - 0.798 0.760 - - - RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]
12. itga5 ENSDARG00000006353 1876 1.557 - - - - 0.823 0.734 - - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
13. AP2A1 ENSDARG00000054320 5591 1.548 - 0.756 - - 0.792 - - - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
14. acvr2aa ENSDARG00000011188 1454 1.544 - - - 0.729 0.815 - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
15. ghra ENSDARG00000054771, ENSDARG00000112689 2883 1.532 0.716 - - - - 0.816 - - - growth hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-070509-1]
16. yy1a ENSDARG00000042796 4982 1.524 - 0.712 0.812 - - - - - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
17. cldnh ENSDARG00000069503 2410 1.522 - 0.720 - - - 0.802 - - - claudin h [Source:ZFIN;Acc:ZDB-GENE-010328-8]
18. npc1 ENSDARG00000017180 3724 1.513 - - - - 0.801 0.712 - - - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
19. itgb1b.1 ENSDARG00000053232 4721 1.504 - 0.741 - - - 0.763 - - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
20. snx1a ENSDARG00000071031 3975 1.503 - - - 0.705 0.798 - - - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
21. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.501 - - 0.761 - 0.740 - - - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
22. tln1 ENSDARG00000100729 5744 1.499 - 0.708 - - - 0.791 - - - talin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-48]
23. elovl1b ENSDARG00000103735 2783 1.48 - 0.770 - - - 0.710 - - - ELOVL fatty acid elongase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2755]
24. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 1.47 - 0.717 0.753 - - - - - - translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
25. mllt10 ENSDARG00000045401 7557 1.464 - 0.734 - - 0.730 - - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
26. arpc5a ENSDARG00000039142 5482 1.448 0.728 0.720 - - - - - - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
27. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 1.448 - 0.734 - - - 0.714 - - - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
28. blvrb ENSDARG00000096829 3296 1.422 - 0.710 - - - 0.712 - - - biliverdin reductase B [Source:ZFIN;Acc:ZDB-GENE-030131-1516]
29. hadh ENSDARG00000030765 3406 1.413 - 0.710 - - - - - - 0.703 hydroxyacyl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040801-261]
30. si:ch211-160e1.5 5586 0.999 - - - - - - 0.999 - - si:ch211-160e1.5
31. SNORD72 SNORD72 4018 0.997 - - - - - - 0.997 - -
32. atp6ap1b ENSDARG00000037153 3970 0.992 - - - - - - 0.992 - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
33. fam160a1 fam160a1 1445 0.991 - - - - - - 0.991 - -
34. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.991 - - - - - - 0.991 - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
35. TSG101 TSG101 1686 0.991 - - - - - - 0.991 - -
36. alcamb ENSDARG00000058538 5672 0.991 - - - - - - 0.991 - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
37. lhfpl2b_1 ENSDARG00000098153 1596 0.991 - - - - - - 0.991 - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
38. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 0.991 - - - - - - 0.991 - - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
39. si:dkey-184p9.7 ENSDARG00000092726 2679 0.991 - - - - - - 0.991 - - si:dkey-184p9.7 [Source:ZFIN;Acc:ZDB-GENE-091204-97]
40. slc7a4 ENSDARG00000068286 1693 0.991 - - - - - - 0.991 - - solute carrier family 7, member 4 [Source:ZFIN;Acc:ZDB-GENE-030919-2]
41. ABHD12B ABHD12B 1877 0.991 - - - - - - 0.991 - -
42. SNORD33 SNORD33 3284 0.99 - - - - - - 0.990 - -
43. rtf1 ENSDARG00000008947 6596 0.99 - - - - - - 0.990 - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
44. CR847934.1 CR847934.1 2658 0.99 - - - - - - 0.990 - -
45. pdlim5b ENSDARG00000027600 4252 0.99 - - - - - - 0.990 - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
46. CR388095.3 CR388095.3 2548 0.99 - - - - - - 0.990 - -
47. plagl2 ENSDARG00000076657 2057 0.99 - - - - - - 0.990 - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
48. rfxap ENSDARG00000076891 1299 0.99 - - - - - - 0.990 - - regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]
49. gcn1l1 gcn1l1 6031 0.99 - - - - - - 0.990 - -
50. FAT1 FAT1 689 0.99 - - - - - - 0.990 - -
51. pinx1 ENSDARG00000023532 4452 0.99 - - - - - - 0.990 - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
52. ttll4 ENSDARG00000078935 1663 0.99 - - - - - - 0.990 - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
53. cx44.1 cx44.1 799 0.99 - - - - - - 0.990 - -
54. oafa ENSDARG00000075851 2015 0.99 - - - - - - 0.990 - - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
55. lepre1 lepre1 5346 0.99 - - - - - - 0.990 - -
56. PREX2 ENSDARG00000071692 827 0.99 - - - - - - 0.990 - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 [Source:ZFIN;Acc:ZDB-GENE-091113-37]
57. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 0.99 - - - - - - 0.990 - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
58. tmco1 ENSDARG00000069099, ENSDARG00000113013 4698 0.99 - - - - - - 0.990 - - transmembrane and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-050417-344]
59. hoxc10a ENSDARG00000070348 2323 0.99 - - - - - - 0.990 - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
60. NDUFB2 ENSDARG00000045490 9141 0.99 - - - - - - 0.990 - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
61. LMLN ENSDARG00000061265 1618 0.99 - - - - - - 0.990 - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
62. dct ENSDARG00000006008 2466 0.99 - - - - - - 0.990 - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
63. pcif1 ENSDARG00000099084 2851 0.99 - - - - - - 0.990 - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
64. ryr1a ENSDARG00000011422 2377 0.989 - - - - - - 0.989 - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
65. wwp2 ENSDARG00000061345 3459 0.989 - - - - - - 0.989 - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
66. ptprfb ENSDARG00000005754 7178 0.989 - - - - - - 0.989 - - protein tyrosine phosphatase, receptor type, f, b [Source:ZFIN;Acc:ZDB-GENE-060503-530]
67. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.989 - - - - - - 0.989 - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
68. ncl ENSDARG00000002710 16951 0.988 - - - - - - 0.988 - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
69. si:ch211-51e12.7 ENSDARG00000045914 9598 0.988 - - - - - - 0.988 - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
70. aldh7a1 ENSDARG00000018426 4637 0.987 - - - - - - 0.987 - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
71. jagn1b ENSDARG00000014995 2063 0.986 - - - - - - 0.986 - - jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]
72. si:ch211-32p8.1 si:ch211-32p8.1 3402 0.986 - - - - - - 0.986 - -
73. lfng ENSDARG00000037879 11783 0.986 - - - - - - 0.986 - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
74. purbb ENSDARG00000103546 4983 0.985 - - - - - - 0.985 - - purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
75. ostc ENSDARG00000104901 16240 0.984 - - - - - - 0.984 - - oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
76. vcl vcl 6667 0.984 - - - - - - 0.984 - -
77. myh10 ENSDARG00000000103 7522 0.976 - - - - - - 0.976 - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
78. atp5h 18018 0.976 - - - - - - 0.976 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
79. marcksl1a ENSDARG00000039034 37303 0.966 - - - - - - 0.966 - - MARCKS-like 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2146]
80. eif5a2 ENSDARG00000056186 43804 0.96 - - - - - - 0.960 - - eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
81. capns1a ENSDARG00000035329 10870 0.941 - - - - - - 0.941 - - calpain, small subunit 1 a [Source:ZFIN;Acc:ZDB-GENE-030113-3]
82. CU914813.1 CU914813.1 29656 0.937 - - - - - - 0.937 - -
83. prkar2aa ENSDARG00000033184 14704 0.935 - - - - - - 0.935 - - protein kinase, cAMP-dependent, regulatory, type II, alpha A [Source:ZFIN;Acc:ZDB-GENE-030131-1007]
84. ccni ENSDARG00000068214 17558 0.934 - - - - - - 0.934 - - cyclin I [Source:ZFIN;Acc:ZDB-GENE-040426-2898]
85. riok1 ENSDARG00000016399 936 0.933 - - - - 0.933 - - - - RIO kinase 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1927]
86. nrp1a ENSDARG00000102153 4154 0.932 - - - - 0.932 - - - - neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
87. hbbe1.1 ENSDARG00000113599 64815 0.924 - - - - - - 0.924 - - hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
88. lman2 ENSDARG00000061854 6251 0.924 - - - - 0.924 - - - - lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
89. tmod4 ENSDARG00000020890 17436 0.918 - - - - - - 0.918 - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
90. tnfsf10l ENSDARG00000004196, ENSDARG00000110725 1756 0.915 - - 0.915 - - - - - - TNF superfamily member 10, like [Source:ZFIN;Acc:ZDB-GENE-010801-1]
91. cad ENSDARG00000041895 4977 0.911 - - - - 0.911 - - - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:ZFIN;Acc:ZDB-GENE-021030-4]
92. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 0.911 - - 0.911 - - - - - - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
93. UBAP2 UBAP2 3818 0.909 - - - - 0.909 - - - -
94. prkcbp1l ENSDARG00000011932 2714 0.904 - - 0.904 - - - - - - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
95. atp5c1 31368 0.9 - - - - - - 0.900 - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant 3
96. cux1a ENSDARG00000078459 3914 0.899 - - 0.899 - - - - - - cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868]
97. CABZ01088039.1 CABZ01088039.1 2482 0.897 - - 0.897 - - - - - -
98. ubc ENSDARG00000102632 36050 0.892 - - - - - - 0.892 - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
99. rps16 ENSDARG00000045487 43243 0.89 - - - - - - 0.890 - - ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-050506-107]
100. golga7 ENSDARG00000057676 4691 0.889 - - 0.889 - - - - - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]

There are 781 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA