Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sgce

Gene Name Gene ID Reads Annotation
sgce ENSDARG00000012138 912 sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]










Genes with expression patterns similar to sgce

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sgce ENSDARG00000012138 912 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
2. sephs1 ENSDARG00000058292 3347 2.992 - - - 0.767 - 0.761 0.704 - 0.760 selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
3. cdc14b ENSDARG00000021483 4958 2.68 - 0.994 0.890 - - - - - 0.796 cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
4. gtf2f1 ENSDARG00000032129 3041 2.661 0.716 0.998 0.947 - - - - - - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
5. taf1 ENSDARG00000035330 912 2.529 - - 0.990 0.784 - 0.755 - - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
6. tfdp1a ENSDARG00000019293, ENSDARG00000111589 1118 2.514 - - 0.986 0.815 - - 0.713 - - transcription factor Dp-1, a [Source:ZFIN;Acc:ZDB-GENE-040426-2883]
7. syncripl ENSDARG00000026723 3889 2.248 - - 0.783 - - 0.757 0.708 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
8. DBF4B ENSDARG00000086550 374 2.241 0.785 - - - - - - 0.748 0.708 DBF4 zinc finger B [Source:ZFIN;Acc:ZDB-GENE-121214-269]
9. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 1.97 - 0.997 0.973 - - - - - - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
10. st14a ENSDARG00000061173 3800 1.954 - 0.985 0.969 - - - - - - suppression of tumorigenicity 14 (colon carcinoma) a [Source:ZFIN;Acc:ZDB-GENE-030131-6496]
11. bag6 ENSDARG00000075892 3782 1.921 - 0.966 0.955 - - - - - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
12. GATAD2B ENSDARG00000005834 3855 1.887 - 0.992 0.895 - - - - - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
13. atxn7l3 ENSDARG00000029331 531 1.887 - - 0.994 0.893 - - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
14. supt20 ENSDARG00000078658 713 1.879 - 0.999 - 0.880 - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
15. slc1a4 ENSDARG00000000551 4298 1.846 - 0.970 0.876 - - - - - - solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-030616-566]
16. ass1 8099 1.837 - 0.981 0.856 - - - - - - argininosuccinate synthase 1
17. coe2 coe2 1633 1.811 0.836 - 0.975 - - - - - -
18. cxxc1 cxxc1 914 1.81 - - 0.990 0.820 - - - - -
19. sart3 ENSDARG00000008032 2594 1.81 - 0.988 - 0.822 - - - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
20. ubr4 ENSDARG00000009549 5565 1.801 - 0.939 0.862 - - - - - - ubiquitin protein ligase E3 component n-recognin 4 [Source:ZFIN;Acc:ZDB-GENE-090313-341]
21. aldh4a1 ENSDARG00000038207 4639 1.8 - 0.866 0.934 - - - - - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
22. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.782 - 0.993 - 0.789 - - - - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
23. prr12a ENSDARG00000074229 1668 1.775 - - 0.979 0.796 - - - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
24. helz ENSDARG00000030560 3259 1.772 - 0.986 - 0.786 - - - - - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
25. srp19 ENSDARG00000035699 2624 1.769 - - 0.993 - - - 0.776 - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
26. znf292b ENSDARG00000043973 3791 1.768 - - 0.926 - - - 0.842 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
27. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.766 - 0.935 - 0.831 - - - - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
28. CABZ01079490.1 CABZ01079490.1 1808 1.759 - - 0.982 0.777 - - - - -
29. tmem30ab ENSDARG00000043555 1344 1.743 - - 0.988 0.755 - - - - - transmembrane protein 30Ab [Source:ZFIN;Acc:ZDB-GENE-030131-5884]
30. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.735 - - 0.930 - - - 0.805 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
31. zgc:101858 ENSDARG00000035129 1393 1.732 - 0.993 - 0.739 - - - - - zgc:101858 [Source:ZFIN;Acc:ZDB-GENE-040927-13]
32. ORC2 ENSDARG00000101465 399 1.727 - - 0.991 - - - - 0.736 - origin recognition complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-061013-682]
33. kdm8 ENSDARG00000102512 321 1.727 - 0.999 - - - - 0.728 - - lysine (K)-specific demethylase 8 [Source:ZFIN;Acc:ZDB-GENE-040718-411]
34. vangl2 ENSDARG00000027397 2418 1.723 - - 0.969 - - - - - 0.754 VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
35. gak ENSDARG00000090654 695 1.722 - - 0.992 0.730 - - - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
36. AL844567.1 AL844567.1 1605 1.721 - - 0.987 - - - - 0.734 -
37. trim3b ENSDARG00000005397 680 1.716 0.724 - 0.992 - - - - - - tripartite motif containing 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1132]
38. kctd15a ENSDARG00000045893 1272 1.715 - 0.991 - - - - - - 0.724 potassium channel tetramerization domain containing 15a [Source:ZFIN;Acc:ZDB-GENE-041010-105]
39. eps15l1a ENSDARG00000042670 1565 1.714 - 0.995 - - - - 0.719 - - epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
40. ubtf ENSDARG00000035066 4070 1.71 - - 0.952 0.758 - - - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
41. C19H1orf85 C19H1orf85 1587 1.707 - 0.996 - 0.711 - - - - -
42. ITFG1 ENSDARG00000075584, ENSDARG00000110264 615 1.703 0.704 0.999 - - - - - - - integrin alpha FG-GAP repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-121003-3]
43. flr ENSDARG00000038024 562 1.703 0.711 - 0.992 - - - - - - fleer [Source:ZFIN;Acc:ZDB-GENE-070117-2066]
44. eif3ea ENSDARG00000090697 14670 1.698 - 0.870 0.828 - - - - - - eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
45. carm1 ENSDARG00000018698 5599 1.696 - - 0.955 - - 0.741 - - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
46. zmiz1a ENSDARG00000074502 3920 1.692 - - 0.940 - - - 0.752 - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
47. pdcd10b ENSDARG00000012591 3395 1.691 - 0.948 - 0.743 - - - - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
48. ADCY3 ADCY3 537 1.685 0.850 - - 0.835 - - - - -
49. mapk12b ENSDARG00000006409 2246 1.68 - - 0.935 0.745 - - - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
50. ppm1da ENSDARG00000009273 7713 1.679 - - 0.893 - - 0.786 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
51. sltm ENSDARG00000052728 6234 1.677 - 0.976 - - - - 0.701 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
52. dctn2 ENSDARG00000031388 3825 1.675 - - 0.966 - - - 0.709 - - dynactin 2 (p50) [Source:ZFIN;Acc:ZDB-GENE-040426-1279]
53. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.666 - 0.900 - - - - 0.766 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
54. dynlt1 ENSDARG00000045909 2451 1.661 - - 0.929 - - 0.732 - - - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
55. taf9 ENSDARG00000077870 6992 1.657 0.712 0.945 - - - - - - - TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
56. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.654 - 0.937 - - - 0.717 - - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
57. ppapdc1b ppapdc1b 2866 1.641 - - 0.938 0.703 - - - - -
58. ube2h ENSDARG00000000019 9900 1.634 - 0.744 0.890 - - - - - - ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
59. pmelb ENSDARG00000033760 206 1.591 0.741 - - 0.850 - - - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
60. plagx ENSDARG00000036855 3768 1.591 - - - 0.824 - - 0.767 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
61. dhx9 ENSDARG00000079725 1241 1.59 - - - 0.837 - - - 0.753 - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
62. usp42 ENSDARG00000077300 926 1.586 - - - 0.875 - 0.711 - - - ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
63. gng2_1 ENSDARG00000056831 113 1.582 - - - 0.833 - - 0.749 - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
64. kifc1 ENSDARG00000001558 6658 1.568 - 0.756 - - - 0.812 - - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
65. top1l ENSDARG00000070545 40529 1.552 - - 0.832 - - - 0.720 - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
66. GPN1 ENSDARG00000043928 566 1.552 - - - 0.851 - - - 0.701 - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
67. nat15 ENSDARG00000061185 396 1.551 - - - 0.826 - - - 0.725 - N-acetyltransferase 15 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-041111-143]
68. mfap1 ENSDARG00000018241 833 1.548 - - - 0.725 - - 0.823 - - microfibril associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1075]
69. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.545 - - - 0.794 - - - 0.751 - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
70. TP53BP2 TP53BP2 217 1.542 - - - 0.839 - - - 0.703 -
71. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.54 0.742 - - 0.798 - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
72. meis2b ENSDARG00000077840 5166 1.538 - - 0.830 0.708 - - - - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
73. LANCL2 ENSDARG00000045465 1221 1.532 - - - 0.772 - - 0.760 - - LanC lantibiotic synthetase component C-like 2 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-070209-191]
74. suv39h1b ENSDARG00000055753 1540 1.53 - - - 0.828 - - - 0.702 - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
75. ubl3b ENSDARG00000021556 1210 1.519 - - - 0.786 - - 0.733 - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
76. smo ENSDARG00000002952 6411 1.517 - - - 0.798 - - 0.719 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
77. ANKRD11 ENSDARG00000051886 10024 1.516 - - - - - 0.728 0.788 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
78. tox3 ENSDARG00000073957 3075 1.513 0.730 - - - - 0.783 - - - TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
79. BX511086.1 BX511086.1 8308 1.512 - - - - - 0.740 0.772 - -
80. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.512 0.732 - - 0.780 - - - - - CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
81. chaf1b ENSDARG00000056473 880 1.51 - - - - - - 0.786 - 0.724 chromatin assembly factor 1, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1947]
82. nfil3-2 658 1.509 - - - 0.788 - - - 0.721 - nuclear factor, interleukin 3 regulated, member 2, transcript variant X1
83. C10H5orf28 C10H5orf28 339 1.503 0.756 - - - - - 0.747 - -
84. lphn3.1 lphn3.1 756 1.501 - - - - - - 0.716 0.785 -
85. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 1.498 - - - 0.757 - 0.741 - - -
86. hif1an ENSDARG00000031915 2098 1.498 - - - 0.793 - - - - 0.705 hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
87. ephb3a ENSDARG00000031548 1872 1.489 - - - 0.726 - - 0.763 - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
88. eif4h ENSDARG00000042252 6742 1.484 - - - 0.771 - - 0.713 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
89. ddx39ab ENSDARG00000015111 11619 1.478 - - - - - 0.769 0.709 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
90. ulk1b ENSDARG00000074481 1212 1.472 - - - - - - 0.733 - 0.739 unc-51 like autophagy activating kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071203-2]
91. ppm1g ENSDARG00000075559 6516 1.47 - - 0.706 - - 0.764 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
92. PAOX PAOX 251 1.469 - - - - - - 0.732 - 0.737
93. hnrnpr ENSDARG00000014569 3423 1.464 - - - - - 0.753 0.711 - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
94. asf1bb ENSDARG00000043713 2340 1.461 - - - - - - 0.755 0.706 - anti-silencing function 1Bb histone chaperone [Source:ZFIN;Acc:ZDB-GENE-040426-2594]
95. cnn3b ENSDARG00000029856 4807 1.458 - - - - - 0.743 0.715 - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
96. ccnl1b ENSDARG00000012140 1639 1.458 - - - - - - 0.735 - 0.723 cyclin L1b [Source:ZFIN;Acc:ZDB-GENE-030131-4813]
97. brms1 ENSDARG00000051955 900 1.458 - - - 0.700 - - 0.758 - - BRMS1, transcriptional repressor and anoikis regulator [Source:ZFIN;Acc:ZDB-GENE-030616-596]
98. klc2 3058 1.457 - - - 0.712 - 0.745 - - - kinesin light chain 2
99. CLIP4 ENSDARG00000096961 363 1.456 0.713 - - - - 0.743 - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
100. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 1.454 - - - - - - 0.719 0.735 - hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]

There are 1451 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA