Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sgcd

Gene Name Gene ID Reads Annotation
sgcd ENSDARG00000098573 4980 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]










Genes with expression patterns similar to sgcd

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sgcd ENSDARG00000098573 4980 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
2. SPEG SPEG 4017 4.995 0.882 - 0.711 - 0.755 0.991 0.910 - 0.746
3. CR354540.2 ENSDARG00000117517 18452 4.816 0.873 - 0.764 - 0.713 - 0.961 0.704 0.801
4. trdn ENSDARG00000041779 4283 4.736 0.774 - 0.773 - 0.734 - 0.934 0.714 0.807 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
5. tnnt3a ENSDARG00000030270 112506 4.716 0.817 - 0.815 - 0.788 - 0.780 0.717 0.799 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
6. mylz3 ENSDARG00000017441 303597 4.461 0.742 - 0.803 0.712 0.795 - 0.704 0.705 - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
7. prx ENSDARG00000017246 6183 4.316 0.786 - 0.750 - - 0.995 0.959 - 0.826 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
8. si:ch211-156j16.1 ENSDARG00000092035 7441 4.265 0.846 - 0.721 - - 0.971 0.964 - 0.763 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
9. srl ENSDARG00000104587 11126 4.246 0.820 - 0.788 - 0.703 0.990 0.945 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
10. rtn2a ENSDARG00000016088 12184 4.188 0.867 - 0.813 0.791 0.755 - 0.962 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
11. trim63 trim63 2437 4.17 0.763 0.968 - 0.811 0.721 - 0.907 - -
12. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 4.069 0.729 - 0.822 - 0.740 - 0.975 - 0.803 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
13. PTPLA PTPLA 4044 3.976 0.797 - - - 0.748 - 0.952 0.733 0.746
14. eef2l2 ENSDARG00000035256 6815 3.957 0.705 - 0.737 - 0.776 0.958 0.781 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
15. neb ENSDARG00000032630, ENSDARG00000109273 19493 3.938 0.849 - 0.815 0.728 0.740 - - - 0.806 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
16. ryr3 ENSDARG00000071331 6795 3.888 0.788 - 0.728 - - - 0.944 0.704 0.724 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
17. txlnba ENSDARG00000020594 9385 3.884 - - 0.726 - 0.708 0.788 0.952 - 0.710 taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
18. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 3.88 0.720 0.821 0.823 - - - 0.813 - 0.703 poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
19. vcl vcl 6667 3.788 0.860 - 0.782 0.715 0.727 - - - 0.704
20. ttnb ttnb 73721 3.778 - - 0.837 0.748 0.781 - - 0.703 0.709
21. si:ch211-226o13.2 84923 3.756 - - 0.780 0.757 0.760 - - 0.702 0.757 si:ch211-226o13.2
22. TMPO TMPO 3264 3.544 0.862 - 0.719 - - 0.993 0.970 - -
23. si:ch211-114n24.7 si:ch211-114n24.7 2544 3.46 0.753 - 0.775 - - 0.990 0.942 - -
24. bin1 bin1 3199 3.428 0.766 0.979 0.810 - - - 0.873 - -
25. zgc:92518 ENSDARG00000016343 3837 3.418 0.871 - 0.780 - 0.804 - 0.963 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
26. nexn ENSDARG00000057317 10972 3.388 0.825 - 0.787 - - - 0.957 - 0.819 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
27. MYOM1 MYOM1 3870 3.364 - - 0.705 - - 0.989 0.966 0.704 -
28. mybpc2b ENSDARG00000021265 9618 3.349 0.876 - 0.755 - - 0.833 0.885 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
29. C13H10orf71 3489 3.31 0.890 - 0.783 - - - 0.917 - 0.720 chromosome 13 C10orf71 homolog
30. EHBP1L1 EHBP1L1 2500 3.302 0.829 - 0.779 - 0.731 - 0.963 - -
31. pbxip1a ENSDARG00000071015 4960 3.258 0.801 - 0.761 - 0.766 - 0.930 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
32. BX294434.1 ENSDARG00000061272 6493 3.221 0.777 - 0.704 - - - 0.973 - 0.767 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
33. jph2 ENSDARG00000028625 6706 3.207 0.782 - - - 0.714 - 0.967 - 0.744 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
34. myom1a ENSDARG00000061249 10230 3.204 - - 0.781 - - - 0.963 0.750 0.710 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
35. NRAP ENSDARG00000009341 3565 3.199 0.827 - 0.714 - - - 0.938 0.720 - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
36. ttna ttna 101197 3.192 0.807 - 0.793 - 0.810 - - - 0.782
37. tgm2a ENSDARG00000070157 4516 3.192 0.787 - 0.755 - 0.723 - 0.927 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
38. ckmb ENSDARG00000040565 505935 3.173 0.803 - 0.792 0.757 0.821 - - - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
39. tpma ENSDARG00000033683 752432 3.166 0.844 - 0.775 - 0.762 - 0.785 - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
40. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 3.154 0.819 - 0.737 - 0.772 0.826 - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
41. znf106a ENSDARG00000016651 6049 3.153 0.707 - - - 0.725 - 0.958 - 0.763 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
42. tmem161a ENSDARG00000012790 16094 3.126 0.897 - 0.760 - - - 0.716 - 0.753 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
43. rp42-pen rp42-pen 3395 3.126 - - 0.705 - 0.757 - 0.945 - 0.719
44. jph1b ENSDARG00000038826 7416 3.123 - - 0.803 0.831 0.751 - 0.738 - - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
45. klhl31 ENSDARG00000039066 13656 3.096 - - 0.757 - 0.765 - 0.788 - 0.786 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
46. cap2 ENSDARG00000104478 3266 3.083 0.745 - - - 0.702 - 0.924 - 0.712 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
47. atp2a1 ENSDARG00000020574 291561 3.033 0.792 - 0.751 - 0.780 - 0.710 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
48. SYNPO2 SYNPO2 7382 3.016 - - 0.742 - 0.762 - 0.710 - 0.802
49. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 3.014 0.810 - 0.748 - 0.745 - - 0.711 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
50. hapln1a ENSDARG00000089769 12334 2.826 0.911 - - - - 0.975 0.940 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
51. efemp2a ENSDARG00000094324 39261 2.797 0.876 - - - - 0.983 0.938 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
52. flncb ENSDARG00000018820 5595 2.75 0.849 0.975 - - - - 0.926 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
53. myod1 ENSDARG00000030110 6019 2.682 0.914 - - - - - 0.965 - 0.803 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
54. fbxw5 ENSDARG00000099139 2802 2.681 0.807 - - - - 0.989 0.885 - - F-box and WD repeat domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2571]
55. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 2.678 0.803 0.966 - - - - 0.909 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
56. slc6a8 ENSDARG00000043646 1114 2.649 0.790 0.957 - - - - 0.902 - - solute carrier family 6 (neurotransmitter transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-071024-2]
57. COMP 2018 2.633 0.772 0.969 - - - - 0.892 - - cartilage oligomeric matrix protein, transcript variant X1
58. cct3 ENSDARG00000016173 15869 2.63 0.810 0.905 - - - - 0.915 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
59. klhl41b ENSDARG00000006757 10762 2.624 0.854 - - - - - 0.955 - 0.815 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
60. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 2.594 0.899 - - - - - 0.948 - 0.747 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
61. purbb ENSDARG00000103546 4983 2.588 0.795 0.975 0.818 - - - - - - purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
62. kcnma1a ENSDARG00000079840 2584 2.588 0.845 - 0.806 - - - 0.937 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
63. xirp2a ENSDARG00000071113 7113 2.56 0.823 - - - - - 0.938 - 0.799 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
64. txlnbb ENSDARG00000076241 6396 2.559 0.850 - - - 0.770 - 0.939 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
65. sptb ENSDARG00000030490 7128 2.553 0.776 - - - - - 0.962 - 0.815 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
66. unc45b ENSDARG00000008433 8298 2.525 0.828 - - - - - 0.951 - 0.746 unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
67. murcb murcb 13655 2.52 0.834 - - 0.721 - - 0.965 - -
68. pvalb4 ENSDARG00000024433 35736 2.515 0.816 - - - - 0.787 0.912 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
69. cacng1 cacng1 3118 2.514 0.844 - - - - - 0.939 - 0.731
70. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 2.506 0.837 - 0.716 - - - 0.953 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
71. pygma ENSDARG00000055518 15972 2.504 0.863 - - - 0.718 - 0.923 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
72. ryr1b ENSDARG00000023797 5693 2.501 - - 0.771 - - - 0.958 - 0.772 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
73. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 2.496 0.822 - 0.711 - - - 0.963 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
74. mafa ENSDARG00000015890 2140 2.491 0.805 - - - - - 0.905 - 0.781 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
75. abcf1 ENSDARG00000031795 8635 2.49 0.712 0.962 - - - - 0.816 - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
76. chrna1 ENSDARG00000009021 2931 2.489 0.808 - - - - - 0.943 - 0.738 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
77. mdh1b ENSDARG00000018008 3196 2.486 0.806 - 0.717 - - - 0.963 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
78. mdh2 ENSDARG00000043371 14485 2.482 - - 0.761 - - - 0.942 - 0.779 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
79. sh3bgr ENSDARG00000021633 3498 2.48 0.763 - - - - - 0.967 - 0.750 SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
80. PTGES3L PTGES3L 4801 2.479 0.782 0.748 - - - - 0.949 - -
81. obsl1b ENSDARG00000077388 2511 2.469 0.870 - 0.704 - - - 0.895 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
82. hhatla ENSDARG00000039051 6598 2.457 0.735 - - - - - 0.947 - 0.775 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
83. zgc:158296 ENSDARG00000070923 3935 2.457 - - 0.744 0.752 - - 0.961 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
84. smtnl1 ENSDARG00000041257 7410 2.456 0.775 - - - - - 0.957 - 0.724 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
85. chrnb1 ENSDARG00000069660, ENSDARG00000112115, ENSDARG00000113395 1438 2.454 0.786 - - - - - 0.928 - 0.740 cholinergic receptor, nicotinic, beta 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-070821-4]
86. tnnt2d ENSDARG00000002988 7590 2.45 0.808 - - - - - 0.904 - 0.738 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
87. pgam2 ENSDARG00000057571 23387 2.44 0.808 - - - 0.769 0.863 - - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
88. klhl40a ENSDARG00000039052 2537 2.44 0.793 - - - - - 0.925 - 0.722 kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
89. ATP5J_2 ATP5J_2 2381 2.439 0.811 - 0.708 - - - 0.920 - -
90. usp2a ENSDARG00000020107 2586 2.435 0.834 - - - - - 0.894 - 0.707 ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
91. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.426 0.747 - - - - - 0.958 - 0.721 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
92. casq1b ENSDARG00000018105 2643 2.421 0.761 - - - - - 0.941 - 0.719 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
93. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 2.411 0.810 - - - - 0.786 0.815 - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
94. BX324201.1 BX324201.1 3302 2.387 0.747 - - - - - 0.929 - 0.711
95. MUSTN1 MUSTN1 1882 2.387 0.734 - 0.722 - - - 0.931 - -
96. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 2.385 0.891 - - 0.728 - - - - 0.766 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
97. CR847973.1 ENSDARG00000115516 8754 2.384 0.760 - - 0.732 - - 0.892 - -
98. ank1 ank1 5209 2.382 0.920 - - - 0.723 - - - 0.739
99. desma ENSDARG00000058656 30292 2.37 0.786 - 0.812 - 0.772 - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
100. nid1a ENSDARG00000068710 3948 2.369 - - - 0.711 0.707 - 0.951 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]

There are 1451 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA