Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sgcb

Gene Name Gene ID Reads Annotation
sgcb ENSDARG00000052341 4168 sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]










Genes with expression patterns similar to sgcb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sgcb ENSDARG00000052341 4168 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
2. vcl vcl 6667 3.424 - 0.940 0.726 - - 0.985 - - 0.773
3. jph1b ENSDARG00000038826 7416 3.405 - 0.956 0.769 - 0.724 - 0.956 - - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
4. znf106a ENSDARG00000016651 6049 3.346 - 0.868 - 0.753 - 0.981 - - 0.744 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
5. SYNPO2 SYNPO2 7382 3.315 0.860 - 0.733 - - - 0.952 - 0.770
6. jph1a ENSDARG00000058603 2852 3.31 0.989 0.867 0.721 - - - - - 0.733 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
7. tmem161a ENSDARG00000012790 16094 3.178 - - - - - 0.969 0.702 0.738 0.769 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
8. apobec2a ENSDARG00000018881 4790 3.073 - 0.880 - - - 0.767 - 0.714 0.712 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
9. trdn ENSDARG00000041779 4283 3.071 - 0.922 0.719 - 0.704 - - - 0.726 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
10. klhl31 ENSDARG00000039066 13656 2.943 0.707 - 0.713 - 0.729 - - - 0.794 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
11. mybpc3 ENSDARG00000011615 7271 2.727 0.986 - - - - 0.979 - - 0.762 myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
12. dldh ENSDARG00000008785 15202 2.547 0.711 - - - - 0.941 0.895 - - dihydrolipoamide dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040120-4]
13. hhatla ENSDARG00000039051 6598 2.52 - 0.926 0.846 - - - - - 0.748 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
14. mybphb ENSDARG00000003081 5208 2.499 - 0.937 - 0.837 - - - - 0.725 myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
15. IGFN1 IGFN1 5030 2.485 - 0.782 - - - 0.983 - - 0.720
16. PTPLA PTPLA 4044 2.47 - 0.876 0.818 - - - - - 0.776
17. nmrk2 ENSDARG00000067848 10293 2.458 0.797 0.940 - 0.721 - - - - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
18. chac1 ENSDARG00000070426 17552 2.43 - - - - - 0.758 0.901 - 0.771 ChaC, cation transport regulator homolog 1 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-030131-1957]
19. phex ENSDARG00000062363 1413 2.409 0.947 0.720 - - - - - - 0.742 phosphate regulating endopeptidase homolog, X-linked [Source:ZFIN;Acc:ZDB-GENE-030103-2]
20. tnni1al 8272 2.404 - - - 0.809 - 0.888 - - 0.707 troponin I, skeletal, slow like, transcript variant X1
21. AIMP1 ENSDARG00000060036 4136 2.402 - 0.918 0.739 - - - - - 0.745 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
22. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.379 - 0.930 0.711 - - - - - 0.738 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
23. txlnbb ENSDARG00000076241 6396 2.369 - 0.936 - - 0.707 - - - 0.726 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
24. trim55a ENSDARG00000029596 2858 2.348 - 0.912 0.720 - - - - - 0.716 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
25. pygmb ENSDARG00000013317 5454 2.327 - 0.823 0.738 - - - - - 0.766 phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
26. tmem38a ENSDARG00000024047 41883 2.312 - - 0.730 0.800 0.782 - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
27. tnnt3a ENSDARG00000030270 112506 2.31 - - 0.734 - 0.788 - - - 0.788 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
28. sdhdb ENSDARG00000030139 9761 2.3 - - - - - - 0.873 0.706 0.721 succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
29. tmod4 ENSDARG00000020890 17436 2.22 - - 0.715 - 0.716 - - - 0.789 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
30. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.212 - - 0.741 - 0.712 - - - 0.759 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
31. ttna ttna 101197 2.202 - - 0.743 - 0.725 - - - 0.734
32. BX511021.1 ENSDARG00000073936 647 1.918 0.983 0.935 - - - - - - - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
33. klhl40b ENSDARG00000019125 3633 1.889 - - - - - 0.979 0.910 - - kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
34. mef2cb ENSDARG00000009418 1124 1.881 - 0.912 - - - 0.969 - - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
35. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.873 0.923 - - - - 0.950 - - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
36. ppm1la ENSDARG00000063218 2142 1.867 - 0.899 - - - 0.968 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
37. larp1b ENSDARG00000061169 9939 1.856 - - - - - 0.972 0.884 - - La ribonucleoprotein domain family, member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]
38. zgc:66479 ENSDARG00000008732 3347 1.846 - 0.875 - - - 0.971 - - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
39. pebp1 ENSDARG00000042069 6651 1.839 - 0.865 - - - 0.974 - - - phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
40. dnajc11 1939 1.831 0.978 0.853 - - - - - - - DnaJ heat shock protein family (Hsp40) member C11
41. psma3 ENSDARG00000086618 6200 1.806 - - - - - 0.973 0.833 - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
42. cfl2 ENSDARG00000014106 8051 1.801 - 0.929 - - - - 0.872 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
43. fam3c ENSDARG00000056152 3833 1.8 0.838 - - - - 0.962 - - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
44. sgca ENSDARG00000074156 2418 1.787 - 0.814 - - - - 0.973 - - sarcoglycan, alpha [Source:ZFIN;Acc:ZDB-GENE-041111-121]
45. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.787 - 0.817 - - - 0.970 - - - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
46. ryr1a ENSDARG00000011422 2377 1.786 0.983 0.803 - - - - - - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
47. chst11 ENSDARG00000034375 2701 1.786 - - - - - 0.972 0.814 - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
48. slc2a15a ENSDARG00000029894 2674 1.746 - 0.770 - - - 0.976 - - - solute carrier family 2 (facilitated glucose transporter), member 15a [Source:ZFIN;Acc:ZDB-GENE-060531-109]
49. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.74 - 0.753 - - - 0.987 - - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
50. wdr3 ENSDARG00000011079 1403 1.737 0.979 0.758 - - - - - - - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
51. nudt3a ENSDARG00000016256 2713 1.731 - 0.761 - - - 0.970 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
52. psmc1a ENSDARG00000030537 2799 1.722 0.956 0.766 - - - - - - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
53. mrps24 ENSDARG00000100116 1750 1.721 - 0.752 - - - 0.969 - - - mitochondrial ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-050522-393]
54. CTBP1 ENSDARG00000057007, ENSDARG00000115804 2088 1.714 - - - - - 0.966 0.748 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
55. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.714 0.971 0.743 - - - - - - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
56. nop2 ENSDARG00000043304 2511 1.704 0.986 0.718 - - - - - - - NOP2 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050309-7]
57. C13H10orf71 3489 1.703 - 0.964 - - - - - - 0.739 chromosome 13 C10orf71 homolog
58. hspb7 ENSDARG00000104441 1417 1.701 - 0.734 - - - 0.967 - - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
59. dld ENSDARG00000020219 4928 1.7 - 0.731 - - - 0.969 - - - deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
60. eno3 ENSDARG00000039007 11355 1.698 - 0.794 - - - 0.904 - - - enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
61. chrna1 ENSDARG00000009021 2931 1.698 - 0.918 - - - - - - 0.780 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
62. hoxb7a ENSDARG00000056030 1212 1.696 0.972 0.724 - - - - - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
63. cilp ENSDARG00000053362 1429 1.695 0.985 - - - - - - - 0.710 cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
64. vars ENSDARG00000044575 1367 1.694 0.983 0.711 - - - - - - - valyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-010601-1]
65. gpc1b ENSDARG00000090585 1393 1.694 0.984 0.710 - - - - - - - glypican 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1306]
66. bzw2 ENSDARG00000035918 1502 1.69 - - - - - 0.821 0.869 - - basic leucine zipper and W2 domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-746]
67. sh3bgr ENSDARG00000021633 3498 1.689 - 0.890 - - - - - - 0.799 SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
68. ndrg2 ENSDARG00000011170 11442 1.685 - - - - - 0.969 0.716 - - NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
69. ryr1b ENSDARG00000023797 5693 1.683 - 0.933 - - - - - - 0.750 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
70. myod1 ENSDARG00000030110 6019 1.681 - 0.892 - - - - - - 0.789 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
71. matn4 ENSDARG00000015947 10967 1.681 - - - - - 0.894 0.787 - - matrilin 4 [Source:ZFIN;Acc:ZDB-GENE-050208-64]
72. timm10b ENSDARG00000043898 1233 1.681 - - - - - 0.965 0.716 - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
73. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 1.679 - 0.925 - - - - - - 0.754 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
74. cacng1 cacng1 3118 1.674 - 0.930 - - 0.744 - - - -
75. ndufa6 ENSDARG00000038028 2653 1.669 - 0.797 - - - - 0.872 - - NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
76. crtap ENSDARG00000018010 7722 1.668 0.922 - - - - - 0.746 - - cartilage associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-2619]
77. tgm1l1 ENSDARG00000102106 1437 1.666 - 0.946 0.720 - - - - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
78. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.665 - 0.928 0.737 - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
79. prx ENSDARG00000017246 6183 1.665 - 0.932 - - - - - - 0.733 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
80. sparc ENSDARG00000019353 38281 1.664 0.959 - - - - 0.705 - - - secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
81. MYOT ENSDARG00000076312 1791 1.663 - 0.845 0.818 - - - - - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
82. sncga ENSDARG00000034423, ENSDARG00000112260 5469 1.662 - 0.808 - - - - - - 0.854 synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
83. her6 ENSDARG00000006514, ENSDARG00000111099 7477 1.662 0.951 0.711 - - - - - - - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
84. plecb ENSDARG00000021987 13621 1.662 - 0.905 - - - - 0.757 - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
85. rims2a ENSDARG00000101606 1088 1.659 0.952 0.707 - - - - - - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
86. chrnd ENSDARG00000019342 2728 1.658 - 0.895 - - - - - - 0.763 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
87. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.655 0.925 - - - - - 0.730 - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
88. srsf5b ENSDARG00000027734 6996 1.651 0.926 - - - - - 0.725 - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
89. fitm1 ENSDARG00000056464 1759 1.649 - 0.909 - - 0.740 - - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
90. hnrpdl 14288 1.648 0.900 - - - - - 0.748 - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
91. xirp2a ENSDARG00000071113 7113 1.648 - 0.936 - 0.712 - - - - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
92. BX294434.1 ENSDARG00000061272 6493 1.647 - 0.924 - - - - - - 0.723 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
93. myom1a ENSDARG00000061249 10230 1.641 0.938 - - - - - - - 0.703 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
94. mrpl27 ENSDARG00000032985 2158 1.64 - 0.820 - - - - 0.820 - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
95. tnnc1b ENSDARG00000037539 13945 1.637 - 0.927 - - - - - - 0.710 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
96. srl ENSDARG00000104587 11126 1.636 - 0.934 - 0.702 - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
97. phgdh ENSDARG00000001873 8325 1.634 0.930 0.704 - - - - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
98. pbxip1a ENSDARG00000071015 4960 1.627 - 0.917 - - - - - - 0.710 pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
99. epyc ENSDARG00000056950 7783 1.626 - 0.837 - - - - - - 0.789 epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
100. zgc:158296 ENSDARG00000070923 3935 1.625 - 0.865 - - - - - - 0.760 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]

There are 1463 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA