Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sgca

Gene Name Gene ID Reads Annotation
sgca ENSDARG00000074156 2418 sarcoglycan, alpha [Source:ZFIN;Acc:ZDB-GENE-041111-121]










Genes with expression patterns similar to sgca

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sgca ENSDARG00000074156 2418 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sarcoglycan, alpha [Source:ZFIN;Acc:ZDB-GENE-041111-121]
2. stac3 ENSDARG00000098883 1765 2.501 - 0.865 - - - 0.855 - 0.781 - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
3. chrna1 ENSDARG00000009021 2931 2.454 - 0.781 0.791 - - 0.882 - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
4. cfl2 ENSDARG00000014106 8051 2.44 0.863 0.784 - - - - 0.793 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
5. SYNPO2 SYNPO2 7382 2.432 - - 0.709 - - 0.809 0.914 - -
6. AIMP1 ENSDARG00000060036 4136 2.424 - 0.827 - - 0.768 0.829 - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
7. ntmt1 ENSDARG00000022399 5779 2.418 0.803 0.836 - - - 0.779 - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
8. ndufv1 ENSDARG00000036438 8437 2.396 - - - - - 0.742 0.861 0.793 - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
9. tnnc1b ENSDARG00000037539 13945 2.356 - 0.878 0.749 - - 0.729 - - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
10. klhl40a ENSDARG00000039052 2537 2.354 - 0.779 0.744 - - 0.831 - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
11. rp42-pen rp42-pen 3395 2.331 - 0.805 0.703 - - 0.823 - - -
12. ERRFI1 ERRFI1 664 2.32 - 0.799 - - - 0.758 0.763 - -
13. mrpl27 ENSDARG00000032985 2158 2.32 - 0.753 - - - 0.713 0.854 - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
14. srl ENSDARG00000104587 11126 2.311 - 0.819 - 0.789 - - - 0.703 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
15. CAPN5 CAPN5 357 2.268 - - - - - 0.772 0.793 0.703 -
16. mef2ca ENSDARG00000029764 18547 2.256 - 0.796 0.721 - 0.739 - - - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
17. ckmt2 ckmt2 768 2.236 - 0.714 - - - 0.701 - 0.821 -
18. sgcb ENSDARG00000052341 4168 1.787 - 0.814 - - - - 0.973 - - sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
19. vwde ENSDARG00000103443 5758 1.758 - 0.911 - - - 0.847 - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
20. smyd2b ENSDARG00000005629 8181 1.722 - 0.865 - - - 0.857 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
21. cacng1 cacng1 3118 1.716 - 0.833 - - - 0.883 - - -
22. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.704 - 0.908 - - - 0.796 - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
23. jph1b ENSDARG00000038826 7416 1.702 - 0.782 - - - - 0.920 - - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
24. sgcg_1 ENSDARG00000038107 1998 1.68 - - - - - 0.791 0.889 - - sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
25. PTPLA PTPLA 4044 1.677 - 0.816 - - - 0.861 - - -
26. tcp1 ENSDARG00000017891 7946 1.668 0.762 - - - - - 0.906 - - t-complex 1 [Source:ZFIN;Acc:ZDB-GENE-990714-24]
27. ITGB1BP2 ENSDARG00000030176 2472 1.664 - 0.817 - - - 0.847 - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
28. TENC1 TENC1 1729 1.651 - 0.874 - - - 0.777 - - -
29. zgc:92518 ENSDARG00000016343 3837 1.649 - - - 0.757 - 0.892 - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
30. nexn ENSDARG00000057317 10972 1.649 - - - 0.745 - 0.904 - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
31. BX511021.1 ENSDARG00000073936 647 1.644 - 0.886 - - - 0.758 - - - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
32. txlnbb ENSDARG00000076241 6396 1.64 - 0.870 - - - 0.770 - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
33. zgc:158296 ENSDARG00000070923 3935 1.635 - 0.870 - - - 0.765 - - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
34. znf648 ENSDARG00000104823 1918 1.629 - 0.811 - - - 0.818 - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
35. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.627 - 0.804 - - - 0.823 - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
36. myoz2b ENSDARG00000037266 2139 1.625 - 0.801 - - - - - 0.824 - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
37. DNAJA4 ENSDARG00000051762 5657 1.616 - 0.753 - - - 0.863 - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
38. tomm34 ENSDARG00000001557 1874 1.613 - 0.734 - - - 0.879 - - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
39. sucla2 ENSDARG00000005359 5992 1.613 - 0.780 - - - 0.833 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
40. mrpl12 ENSDARG00000038768 5539 1.613 - 0.742 - - - - 0.871 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
41. sh3bgr ENSDARG00000021633 3498 1.611 - 0.856 - - - 0.755 - - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
42. serbp1a ENSDARG00000074242 10818 1.607 - - - - - 0.700 0.907 - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
43. tmem182 tmem182 12589 1.602 - - - 0.710 - 0.892 - - -
44. mycb ENSDARG00000007241 3988 1.602 - - - - - 0.766 0.836 - - MYC proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-780]
45. myhc4 ENSDARG00000035438 1322 1.601 - 0.822 - - - 0.779 - - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
46. pes ENSDARG00000018902 3286 1.601 - 0.807 - - - - 0.794 - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
47. NRAP ENSDARG00000009341 3565 1.599 - 0.761 - - - 0.838 - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
48. mfn1b ENSDARG00000079219 1699 1.592 - 0.721 - - - - 0.871 - - mitofusin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1553]
49. tnw 16679 1.589 0.845 0.744 - - - - - - - tenascin W, transcript variant X2
50. gypc ENSDARG00000041546 1487 1.587 - 0.802 - - - 0.785 - - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
51. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.587 - 0.876 - - - 0.711 - - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
52. foxc1b ENSDARG00000055398 1499 1.585 - 0.814 - - - 0.771 - - - forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
53. CR392006.1 CR392006.1 1401 1.585 - 0.739 - - - 0.846 - - -
54. smtnl1 ENSDARG00000041257 7410 1.583 - - - - - 0.841 - 0.742 - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
55. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 1.581 - 0.828 - - - - 0.753 - - RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
56. CU929431.1 CU929431.1 2234 1.581 - - - - - 0.770 0.811 - -
57. myod1 ENSDARG00000030110 6019 1.578 - 0.731 - - - 0.847 - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
58. tgm1l1 ENSDARG00000102106 1437 1.576 - 0.806 - - - 0.770 - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
59. usp28 ENSDARG00000008880 1850 1.576 - 0.837 - - 0.739 - - - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
60. CR847973.1 ENSDARG00000115516 8754 1.575 - 0.740 - - - 0.835 - - -
61. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 1.574 0.871 - - - - 0.703 - - - cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
62. ryr1b ENSDARG00000023797 5693 1.573 - 0.859 - 0.714 - - - - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
63. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.572 - 0.803 - - - - 0.769 - -
64. snrnp70 ENSDARG00000077126 5921 1.571 - 0.775 - - - - 0.796 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
65. si:ch211-242b18.1 ENSDARG00000054723 2929 1.571 - 0.740 - - - 0.831 - - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
66. timm8b ENSDARG00000055708 7291 1.567 0.802 0.765 - - - - - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
67. tmem161a ENSDARG00000012790 16094 1.567 - - 0.782 0.785 - - - - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
68. plecb ENSDARG00000021987 13621 1.567 - 0.814 - - - - 0.753 - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
69. chchd1 ENSDARG00000029100 2121 1.566 0.701 - - - - - 0.865 - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]
70. sdhdb ENSDARG00000030139 9761 1.565 0.713 - - - - - 0.852 - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
71. hsp90aa1.1 ENSDARG00000010478 47784 1.564 - - - - - 0.722 - 0.842 - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
72. pi15a ENSDARG00000045378 2361 1.563 - 0.772 - - - 0.791 - - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
73. limch1a ENSDARG00000074275 2981 1.563 - 0.829 - - - 0.734 - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
74. tgm2a ENSDARG00000070157 4516 1.561 - - - 0.709 - 0.852 - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
75. BX001033.2 BX001033.2 857 1.559 - 0.811 0.748 - - - - - -
76. MYOM3 2720 1.557 - 0.790 - - - - - 0.767 - myomesin 3, transcript variant X2
77. mdh1b ENSDARG00000018008 3196 1.556 - - 0.812 - - 0.744 - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
78. ATP5J_2 ATP5J_2 2381 1.554 - 0.748 - - - 0.806 - - -
79. ACTN2 ACTN2 343 1.549 - - - - - 0.721 0.828 - -
80. xirp2a ENSDARG00000071113 7113 1.548 0.739 0.809 - - - - - - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
81. smyd1b ENSDARG00000091253 4964 1.547 - 0.783 - - - - - 0.764 - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
82. COL13A1 1565 1.546 - 0.814 - - - - 0.732 - - collagen, type XIII, alpha 1, transcript variant X1
83. PBLD_1 PBLD_1 585 1.545 - 0.739 - - - 0.806 - - -
84. chrne ENSDARG00000034307, ENSDARG00000112263 1022 1.542 - 0.769 - - - 0.773 - - - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
85. sptb ENSDARG00000030490 7128 1.541 - 0.782 - - - 0.759 - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
86. chrnd ENSDARG00000019342 2728 1.539 - 0.812 0.727 - - - - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
87. auts2 auts2 1538 1.538 - 0.722 - - - - 0.816 - -
88. hhatla ENSDARG00000039051 6598 1.537 - 0.817 - 0.720 - - - - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
89. ryr3 ENSDARG00000071331 6795 1.533 - 0.725 - - - 0.808 - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
90. pdlim7 ENSDARG00000103854 465 1.533 - 0.733 - - - 0.800 - - - PDZ and LIM domain 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2092]
91. cux2a 493 1.528 - 0.806 - - - - 0.722 - - cut-like homeobox 2a
92. six1b ENSDARG00000026473 1908 1.527 - 0.783 - - - 0.744 - - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
93. acta1b ENSDARG00000055618 195597 1.527 - - 0.723 - - 0.804 - - - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
94. vcl vcl 6667 1.525 - 0.764 0.761 - - - - - -
95. hfe2 4113 1.524 - 0.758 - - - 0.766 - - - hemochromatosis type 2
96. dtnba ENSDARG00000077694 5483 1.521 - 0.704 - - - 0.817 - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
97. eftud2 ENSDARG00000012261 3081 1.516 - 0.752 - - - - 0.764 - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
98. socs5a ENSDARG00000100717 6927 1.513 - 0.720 - - - - 0.793 - - suppressor of cytokine signaling 5a [Source:ZFIN;Acc:ZDB-GENE-061013-408]
99. adss ENSDARG00000002071 5497 1.511 - - 0.736 - - - - 0.775 - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
100. txnipb ENSDARG00000070000 2365 1.511 - 0.745 - - - 0.766 - - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]

There are 1086 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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