Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sfxn3

Gene Name Gene ID Reads Annotation
sfxn3 ENSDARG00000057374, ENSDARG00000112320 1766 sideroflexin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2092]










Genes with expression patterns similar to sfxn3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sfxn3 ENSDARG00000057374, ENSDARG00000112320 1766 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sideroflexin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2092]
2. BX571714.1 ENSDARG00000114727 243 2.316 - 0.710 - - - 0.742 0.864 - - SET domain containing 1A [Source:NCBI gene;Acc:556535]
3. srp19 ENSDARG00000035699 2624 1.797 0.814 - 0.983 - - - - - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
4. arglu1b ENSDARG00000018319 1110 1.78 0.804 - 0.976 - - - - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
5. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.779 0.818 - 0.961 - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
6. SVIL SVIL 2589 1.771 - - 0.958 - - - - 0.813 -
7. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.767 0.786 - 0.981 - - - - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
8. NFRKB ENSDARG00000091512 646 1.758 0.777 - 0.981 - - - - - - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
9. aes ENSDARG00000021805, ENSDARG00000115836 1533 1.752 - - 0.983 - - - - 0.769 - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
10. tyr ENSDARG00000039077 568 1.751 - - 0.981 - - - 0.770 - - tyrosinase [Source:ZFIN;Acc:ZDB-GENE-991026-3]
11. cab39l1 ENSDARG00000021374, ENSDARG00000112995 2033 1.743 0.764 - 0.979 - - - - - - calcium binding protein 39, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2897]
12. ZNF576 ZNF576 1447 1.743 - - 0.977 - - - - 0.766 -
13. vta1 ENSDARG00000013732 6072 1.737 0.761 - 0.976 - - - - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
14. bag6 ENSDARG00000075892 3782 1.727 0.775 - 0.952 - - - - - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
15. nme3 ENSDARG00000100990 3889 1.722 0.764 - 0.958 - - - - - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
16. mrpl11 ENSDARG00000013075 2927 1.722 0.754 - 0.968 - - - - - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
17. necap2 ENSDARG00000046002 4372 1.721 - 0.748 0.973 - - - - - - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
18. nf1b ENSDARG00000004184 548 1.72 - - 0.984 - - - - 0.736 - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
19. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.719 - 0.822 0.897 - - - - - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
20. sec22a ENSDARG00000078328 1207 1.716 0.733 - 0.983 - - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
21. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 1.715 - - 0.965 - - - - 0.750 - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
22. sf3a3 ENSDARG00000100114 4511 1.695 - - 0.926 - - - - 0.769 - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
23. KIAA0355 3250 1.695 0.728 - 0.967 - - - - - - KIAA0355 ortholog, transcript variant X1
24. znf259 znf259 1819 1.693 0.711 - 0.982 - - - - - -
25. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 1.679 - - 0.952 - - - - 0.727 - E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
26. znf207a ENSDARG00000015538 2630 1.672 0.715 - 0.957 - - - - - - zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
27. ube2g2 ENSDARG00000025404 1774 1.666 - 0.705 0.961 - - - - - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
28. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 1.654 0.863 - - - - - - 0.791 - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
29. lztr1 ENSDARG00000015905, ENSDARG00000114621 632 1.643 0.863 - - - - - - 0.780 - leucine-zipper-like transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9564]
30. sod2 ENSDARG00000042644 1382 1.634 - - - - - 0.868 0.766 - - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
31. rpn1 ENSDARG00000059323 10411 1.628 - 0.764 0.864 - - - - - - ribophorin I [Source:ZFIN;Acc:ZDB-GENE-030131-4286]
32. pcnxl3 pcnxl3 756 1.626 0.845 - - - - - - 0.781 -
33. atp1a1a.4 ENSDARG00000001870 1864 1.62 - - - - - 0.774 0.846 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-001212-4]
34. vil1 ENSDARG00000040466 81 1.618 - - - - - 0.797 0.821 - - villin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-799]
35. SEC24A ENSDARG00000104375 2614 1.612 - 0.714 0.898 - - - - - - SEC24 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-120926-1]
36. chd1l ENSDARG00000015471 1142 1.612 0.716 - 0.896 - - - - - - chromodomain helicase DNA binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-892]
37. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.609 - - 0.905 - - - - 0.704 - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
38. cldn5a ENSDARG00000043716 3865 1.607 - - 0.852 - - - - 0.755 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
39. lgmn ENSDARG00000039150 2788 1.6 - - - - - 0.739 0.861 - - legumain [Source:ZFIN;Acc:ZDB-GENE-021030-1]
40. gnb4b ENSDARG00000115383 7457 1.592 0.822 0.770 - - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
41. siae ENSDARG00000040527, ENSDARG00000111850 186 1.589 0.807 - - - - - - 0.782 - sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]
42. CU596012.2 CU596012.2 1046 1.588 - - - - - 0.711 0.877 - -
43. ing5a ENSDARG00000022413 268 1.581 0.817 - - - - - 0.764 - - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
44. syncripl ENSDARG00000026723 3889 1.577 0.801 - 0.776 - - - - - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
45. zgc:110626 ENSDARG00000053159 1124 1.573 0.808 - - - - - - 0.765 - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
46. map3k7 ENSDARG00000020469 2845 1.572 0.830 0.742 - - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
47. thrap3b ENSDARG00000098228 4396 1.571 0.702 - 0.869 - - - - - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
48. bysl ENSDARG00000001057 2621 1.57 0.835 - - - - - - 0.735 - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
49. esrrb ENSDARG00000100847 636 1.564 - - - - - 0.754 0.810 - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
50. clcnk ENSDARG00000022560 355 1.558 - - - - - 0.775 0.783 - - chloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
51. mb ENSDARG00000031952 351 1.555 - - - - - 0.776 0.779 - - myoglobin [Source:ZFIN;Acc:ZDB-GENE-040426-1430]
52. WIZ WIZ 1188 1.555 - - - - - - 0.768 0.787 -
53. MRPL52 ENSDARG00000090568 4402 1.555 0.804 - - - - - - 0.751 - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
54. dachc ENSDARG00000003142, ENSDARG00000109556 513 1.546 - - - - - - 0.787 0.759 - dachshund c [Source:ZFIN;Acc:ZDB-GENE-020402-5]
55. si:ch211-120g10.1 ENSDARG00000090930 275 1.545 - - - - - 0.835 0.710 - - si:ch211-120g10.1 [Source:ZFIN;Acc:ZDB-GENE-130531-56]
56. hadhab ENSDARG00000060594 3664 1.544 0.754 - - - - 0.790 - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
57. zgc:158222 ENSDARG00000051873, ENSDARG00000112532 642 1.538 - 0.806 - - - - 0.732 - - zgc:158222 [Source:ZFIN;Acc:ZDB-GENE-070112-1522]
58. slc12a3 ENSDARG00000013855 990 1.538 - - - - - 0.769 0.769 - - solute carrier family 12 (sodium/chloride transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9505]
59. gucy2c ENSDARG00000014320, ENSDARG00000116238 322 1.537 - - - - - 0.758 0.779 - - guanylate cyclase 2C [Source:ZFIN;Acc:ZDB-GENE-091118-67]
60. si:ch211-69i14.10 si:ch211-69i14.10 1939 1.534 - - - - - 0.811 0.723 - -
61. tmem33 ENSDARG00000041332 2883 1.534 0.726 - - - - - 0.808 - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
62. LONRF2 LONRF2 721 1.528 0.785 - - - - - - 0.743 -
63. chd 56 1.523 - - - - - 0.754 0.769 - - chordin
64. ccl-c5a ccl-c5a 217 1.517 - - - - - 0.756 0.761 - -
65. zgc:66475 ENSDARG00000099519 1348 1.516 0.768 - - - - - - 0.748 - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
66. NRD1 NRD1 3486 1.515 - - 0.760 - - - - 0.755 -
67. CR388015.1 CR388015.1 311 1.51 - - - - - - 0.746 0.764 -
68. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1.507 - - - - - - 0.730 0.777 - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
69. ATXN7 ENSDARG00000074804 1137 1.503 0.758 - - - - - - 0.745 - ataxin 7 [Source:ZFIN;Acc:ZDB-GENE-110621-1]
70. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 1.498 - 0.706 - - - - 0.792 - - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
71. mrpl54 ENSDARG00000071468 2715 1.497 - - - - - - 0.736 0.761 - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
72. ponzr1 ENSDARG00000090444 540 1.497 - - - - - 0.722 0.775 - - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
73. nop58 ENSDARG00000104353 8497 1.497 - - - - - 0.720 0.777 - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
74. lrpprc ENSDARG00000043970 3847 1.483 - - - - - 0.706 - 0.777 - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
75. chchd1 ENSDARG00000029100 2121 1.47 0.743 - - - - - - 0.727 - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]
76. polr2d ENSDARG00000076509 3386 1.47 0.746 - - - - - 0.724 - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
77. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.454 - - - - - 0.751 0.703 - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
78. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 1.45 - 0.718 - - - - 0.732 - - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
79. nudc ENSDARG00000104837 1798 1.433 - - - - - - 0.723 0.710 - nudC nuclear distribution protein [Source:ZFIN;Acc:ZDB-GENE-040426-899]
80. tmem161b ENSDARG00000055989 680 1.431 - 0.715 - - - - 0.716 - - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
81. cndp2 ENSDARG00000003931 1177 1.423 0.720 - - - - 0.703 - - - carnosine dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5499]
82. lrrc8a lrrc8a 674 0.988 - - 0.988 - - - - - -
83. nsun2 ENSDARG00000056665 740 0.987 - - 0.987 - - - - - - NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
84. CT027778.1 CT027778.1 265 0.987 - - 0.987 - - - - - -
85. ARHGAP23 ARHGAP23 3946 0.986 - - 0.986 - - - - - -
86. tmem231 ENSDARG00000042272 557 0.986 - - 0.986 - - - - - - transmembrane protein 231 [Source:ZFIN;Acc:ZDB-GENE-040426-1386]
87. pcbp2 ENSDARG00000099039 4248 0.986 - - 0.986 - - - - - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
88. arl8bb ENSDARG00000070318 1428 0.986 - - 0.986 - - - - - - ADP-ribosylation factor-like 8Bb [Source:ZFIN;Acc:ZDB-GENE-080516-10]
89. ftr78 ftr78 273 0.985 - - 0.985 - - - - - -
90. ercc2 ENSDARG00000021985 678 0.985 - - 0.985 - - - - - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
91. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 0.985 - - 0.985 - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
92. scd ENSDARG00000033662 146 0.985 - - 0.985 - - - - - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
93. ZNF648 ENSDARG00000104823 194 0.985 - - 0.985 - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
94. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 0.985 - - 0.985 - - - - - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
95. si:ch211-59h6.1 ENSDARG00000013022 193 0.985 - - 0.985 - - - - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
96. gna13a ENSDARG00000073765 925 0.985 - - 0.985 - - - - - - guanine nucleotide binding protein (G protein), alpha 13a [Source:ZFIN;Acc:ZDB-GENE-030131-5024]
97. cttnbp2nl cttnbp2nl 166 0.985 - - 0.985 - - - - - -
98. syt11a ENSDARG00000057913 1145 0.985 - - 0.985 - - - - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
99. flr ENSDARG00000038024 562 0.985 - - 0.985 - - - - - - fleer [Source:ZFIN;Acc:ZDB-GENE-070117-2066]
100. CABZ01112647.1 CABZ01112647.1 147 0.985 - - 0.985 - - - - - -

There are 1377 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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