Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sfswap

Gene Name Gene ID Reads Annotation
sfswap ENSDARG00000005980, ENSDARG00000112551 1022 splicing factor SWAP [Source:ZFIN;Acc:ZDB-GENE-040426-931]










Genes with expression patterns similar to sfswap

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sfswap ENSDARG00000005980, ENSDARG00000112551 1022 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splicing factor SWAP [Source:ZFIN;Acc:ZDB-GENE-040426-931]
2. dnajc15 ENSDARG00000038309 1274 1.648 - 0.783 - - - - 0.865 - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
3. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.623 - 0.731 - - - - 0.892 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
4. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.576 - 0.738 - - - - 0.838 - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
5. lphn3.1 lphn3.1 756 1.542 - - - 0.842 - 0.700 - - -
6. hprt1 ENSDARG00000008884, ENSDARG00000117138 2486 1.519 - 0.757 - - - - 0.762 - - hypoxanthine phosphoribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1918]
7. vangl2 ENSDARG00000027397 2418 1.516 - - - 0.764 - 0.752 - - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
8. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 1.515 - 0.713 - - - 0.802 - - - putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
9. si:dkey-88p24.9 si:dkey-88p24.9 1197 1.508 - 0.737 - 0.771 - - - - -
10. tmem41aa ENSDARG00000070028 248 1.499 - - - - - 0.790 0.709 - - transmembrane protein 41aa [Source:ZFIN;Acc:ZDB-GENE-050522-53]
11. mrpl20 ENSDARG00000090462 791 1.496 - 0.792 - - - - 0.704 - - mitochondrial ribosomal protein L20 [Source:ZFIN;Acc:ZDB-GENE-030131-5299]
12. LMAN2L LMAN2L 555 1.495 0.784 - - 0.711 - - - - -
13. tomm40l ENSDARG00000036721 1714 1.494 - 0.714 - - - - 0.780 - - translocase of outer mitochondrial membrane 40 homolog, like [Source:ZFIN;Acc:ZDB-GENE-040426-2319]
14. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.49 0.723 0.767 - - - - - - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
15. ppp1r14c ENSDARG00000077341 1587 1.483 - 0.780 - - - - 0.703 - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
16. col19a1 ENSDARG00000076163, ENSDARG00000096073 356 1.48 - - - - - 0.765 0.715 - - collagen, type XIX, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090312-196]
17. gdnfa ENSDARG00000039959 345 1.479 0.716 - - - - - 0.763 - - glial cell derived neurotrophic factor a [Source:ZFIN;Acc:ZDB-GENE-010226-1]
18. dixdc1a ENSDARG00000025302 716 1.479 0.733 - - - - 0.746 - - - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
19. taf7 ENSDARG00000019572 1305 1.469 - 0.723 - - - - 0.746 - - TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-020419-18]
20. vldlr ENSDARG00000006257 772 1.469 0.762 - - - - 0.707 - - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
21. mrpl44 ENSDARG00000094277 1778 1.466 - 0.745 - - - - 0.721 - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
22. nars ENSDARG00000061100 2948 1.458 - 0.751 - - - - 0.707 - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
23. ubtf ENSDARG00000035066 4070 1.454 - 0.718 - - - 0.736 - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
24. nucks1a ENSDARG00000078473 28285 1.451 - 0.719 - - - 0.732 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
25. mrpl38 ENSDARG00000039667 1145 1.45 - 0.712 - - - - 0.738 - - mitochondrial ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-040426-2373]
26. adipor1a ENSDARG00000002912, ENSDARG00000113136 796 1.448 - - - 0.703 - - 0.745 - - adiponectin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-169]
27. wu:fb17g07 wu:fb17g07 10567 1.44 - 0.723 - - - - 0.717 - -
28. arid2 ENSDARG00000007413 4413 1.439 0.723 0.716 - - - - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
29. fam193a ENSDARG00000102787 617 1.436 - - - 0.704 - - 0.732 - - family with sequence similarity 193, member A [Source:ZFIN;Acc:ZDB-GENE-080917-25]
30. hspg2 ENSDARG00000076564 3440 1.43 - 0.719 - - - - 0.711 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
31. cox10 ENSDARG00000034309, ENSDARG00000113352 2709 1.43 - 0.713 - - - - 0.717 - - cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:ZFIN;Acc:ZDB-GENE-041111-239]
32. KBTBD2 ENSDARG00000087226 707 1.401 - - - 0.701 - 0.700 - - - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
33. ccdc58 ENSDARG00000045351 972 0.923 - - - - - - 0.923 - - coiled-coil domain containing 58 [Source:ZFIN;Acc:ZDB-GENE-040426-1780]
34. tomm34 ENSDARG00000001557 1874 0.893 - - - - - - 0.893 - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
35. ITPA ENSDARG00000057529 493 0.863 - - - - - - 0.863 - - inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:ZFIN;Acc:ZDB-GENE-070705-218]
36. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 0.859 - - - - - - 0.859 - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
37. PAPD5 2090 0.854 - 0.854 - - - - - - - PAP associated domain containing 5, transcript variant X1
38. THOP1 ENSDARG00000013776 2717 0.852 - - - - - - 0.852 - - thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
39. rbbp8 ENSDARG00000043480 585 0.851 - - - 0.851 - - - - - retinoblastoma binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-050220-14]
40. LIMD1 LIMD1 1306 0.85 - 0.850 - - - - - - -
41. ptpn9b ENSDARG00000073902 755 0.85 - 0.850 - - - - - - - protein tyrosine phosphatase, non-receptor type 9, b [Source:ZFIN;Acc:ZDB-GENE-090313-52]
42. cars ENSDARG00000036164 2019 0.848 - 0.848 - - - - - - - cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
43. foxp4 ENSDARG00000076120 9458 0.842 - 0.842 - - - - - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
44. mrps18a ENSDARG00000024465 5187 0.839 - - - - - - 0.839 - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
45. zgc:171971 ENSDARG00000042054 388 0.838 0.838 - - - - - - - - zgc:171971 [Source:ZFIN;Acc:ZDB-GENE-070928-37]
46. znf280d ENSDARG00000077013 1387 0.836 0.836 - - - - - - - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
47. nmt1b ENSDARG00000057206 654 0.835 - 0.835 - - - - - - - N-myristoyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-081222-3]
48. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 0.834 - - - - - - 0.834 - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
49. clec14a ENSDARG00000103533 718 0.834 - 0.834 - - - - - - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
50. narfl ENSDARG00000062216 768 0.833 - - - 0.833 - - - - - nuclear prelamin A recognition factor-like [Source:ZFIN;Acc:ZDB-GENE-070209-119]
51. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 0.833 - - - - - - 0.833 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
52. nkd1 ENSDARG00000020053 4450 0.832 - 0.832 - - - - - - - naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
53. tial1 ENSDARG00000009525 1856 0.832 - - - - - 0.832 - - - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
54. hs6st2 ENSDARG00000012025 1145 0.831 - - - - - 0.831 - - - heparan sulfate 6-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-14]
55. HYAL2 HYAL2 936 0.829 - 0.829 - - - - - - -
56. CABZ01076275.1 ENSDARG00000100753 5137 0.828 - - - - - - 0.828 - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
57. cdc34a ENSDARG00000069708 1145 0.825 - 0.825 - - - - - - - cell division cycle 34 homolog (S. cerevisiae) a [Source:ZFIN;Acc:ZDB-GENE-040426-713]
58. foxp1a ENSDARG00000004843 3961 0.823 - 0.823 - - - - - - - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
59. ndufs6 ENSDARG00000056583 7220 0.821 - - - - - - 0.821 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
60. stox1 ENSDARG00000062593, ENSDARG00000116897 1174 0.82 - 0.820 - - - - - - - storkhead box 1 [Source:ZFIN;Acc:ZDB-GENE-030925-2]
61. atp5e 14858 0.819 - - - - - - 0.819 - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
62. gar1 ENSDARG00000076526, ENSDARG00000116188 3408 0.819 - - - - - - 0.819 - - GAR1 homolog, ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-040426-893]
63. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 0.818 - 0.818 - - - - - - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
64. cox4i1l ENSDARG00000012388 584 0.818 - - - - - - 0.818 - - cytochrome c oxidase subunit 4I1, like [Source:ZFIN;Acc:ZDB-GENE-130814-2]
65. atxn2 ENSDARG00000052897, ENSDARG00000115860 456 0.817 - 0.817 - - - - - - - ataxin 2 [Source:ZFIN;Acc:ZDB-GENE-060526-217]
66. CABZ01115322.1 CABZ01115322.1 1283 0.817 - 0.817 - - - - - - -
67. dtl ENSDARG00000023002 572 0.815 - - - - - - 0.815 - - denticleless E3 ubiquitin protein ligase homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020419-34]
68. C19H6orf136 C19H6orf136 1387 0.814 - 0.814 - - - - - - -
69. INO80B ENSDARG00000062749 844 0.813 0.813 - - - - - - - - INO80 complex subunit B [Source:ZFIN;Acc:ZDB-GENE-061013-69]
70. pdcd2l ENSDARG00000002754 417 0.813 - - - - - - 0.813 - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
71. bxdc2 ENSDARG00000098935 1348 0.813 - 0.813 - - - - - - - brix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-1]
72. NDNF ENSDARG00000062936 7287 0.811 - - - - - - 0.811 - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
73. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 0.811 - 0.811 - - - - - - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
74. PTP4A3 ENSDARG00000039997 3814 0.81 - 0.810 - - - - - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
75. C1QBP ENSDARG00000039887 11186 0.809 - - - - - - 0.809 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
76. golga1 ENSDARG00000008979 779 0.808 0.808 - - - - - - - - golgin A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1237]
77. C2H14orf119 C2H14orf119 716 0.808 - - - 0.808 - - - - -
78. pqbp1 ENSDARG00000029724 1472 0.807 - - - - - - 0.807 - - polyglutamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-158]
79. galnt10 ENSDARG00000103825 320 0.806 - - - 0.806 - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) [Source:ZFIN;Acc:ZDB-GENE-030131-595]
80. ehd3 ENSDARG00000007869 3238 0.806 - - - - - - 0.806 - - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
81. hibadha ENSDARG00000102906 778 0.805 - - - - - - 0.805 - - 3-hydroxyisobutyrate dehydrogenase a [Source:ZFIN;Acc:ZDB-GENE-040801-264]
82. kif22 ENSDARG00000102624 3694 0.805 0.805 - - - - - - - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
83. bnc2 ENSDARG00000069989 757 0.805 - - - 0.805 - - - - - basonuclin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5784]
84. drg2 ENSDARG00000006642 1167 0.803 - - - - - - 0.803 - - developmentally regulated GTP binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040808-29]
85. si:dkey-119m17.2 509 0.803 - - - - - - 0.803 - - si:dkey-119m17.2, transcript variant X2
86. epc2 ENSDARG00000007485 1200 0.803 - - - - - 0.803 - - - enhancer of polycomb homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-802]
87. dnajc8 ENSDARG00000059373 1858 0.803 - 0.803 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-66]
88. CABZ01066957.1 CABZ01066957.1 161 0.803 - - - - - - 0.803 - -
89. MRPL52 ENSDARG00000090568 4402 0.802 - - - - - - 0.802 - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
90. NOG NOG 324 0.801 - - - - - - 0.801 - -
91. wfdc1 ENSDARG00000058003 850 0.801 - - - - - - 0.801 - - WAP four-disulfide core domain 1 [Source:ZFIN;Acc:ZDB-GENE-070112-352]
92. WDR81 ENSDARG00000079702 822 0.801 - - - - - - 0.801 - - WD repeat domain 81 [Source:ZFIN;Acc:ZDB-GENE-030131-3389]
93. ccar1 ENSDARG00000074759, ENSDARG00000114899 1329 0.801 - 0.801 - - - - - - - cell division cycle and apoptosis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-146]
94. ck2b ck2b 781 0.801 - - - - - - 0.801 - -
95. asns ENSDARG00000016375 1606 0.8 - - - - - - 0.800 - - asparagine synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1091]
96. trmt112 ENSDARG00000071878, ENSDARG00000109878 930 0.8 - 0.800 - - - - - - - tRNA methyltransferase 11-2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-30]
97. tfdp2 ENSDARG00000042835 1985 0.8 - 0.800 - - - - - - - transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
98. kmt2d ENSDARG00000037060 1232 0.8 0.800 - - - - - - - - lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
99. gins1 ENSDARG00000007624 1421 0.799 - 0.799 - - - - - - - GINS complex subunit 1 (Psf1 homolog) [Source:ZFIN;Acc:ZDB-GENE-041010-184]
100. tacc3 ENSDARG00000005454 2305 0.799 - 0.799 - - - - - - - transforming, acidic coiled-coil containing protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-327]

There are 607 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA