Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sfrp1a

Gene Name Gene ID Reads Annotation
sfrp1a ENSDARG00000035521 318 secreted frizzled-related protein 1a [Source:ZFIN;Acc:ZDB-GENE-040310-5]










Genes with expression patterns similar to sfrp1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sfrp1a ENSDARG00000035521 318 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 secreted frizzled-related protein 1a [Source:ZFIN;Acc:ZDB-GENE-040310-5]
2. foxc1a ENSDARG00000091481 1059 1.561 - 0.797 - - - - 0.764 - - forkhead box C1a [Source:ZFIN;Acc:ZDB-GENE-010302-1]
3. pde4cb ENSDARG00000002411 63 1.509 0.718 - - - - 0.791 - - - phosphodiesterase 4C, cAMP-specific b [Source:ZFIN;Acc:ZDB-GENE-030131-4075]
4. sim1a ENSDARG00000023316 190 0.895 - - - - - - 0.895 - - SIM bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020829-1]
5. NCBP1 585 0.882 - - - - - - 0.882 - - nuclear cap binding protein subunit 1
6. tmem70 ENSDARG00000078773 1290 0.869 - 0.869 - - - - - - - transmembrane protein 70 [Source:ZFIN;Acc:ZDB-GENE-070912-593]
7. obsl1a ENSDARG00000003684 1288 0.869 - 0.869 - - - - - - - obscurin-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-649]
8. scn4ab ENSDARG00000034588 109 0.867 - - - - - - 0.867 - - sodium channel, voltage-gated, type IV, alpha, b [Source:ZFIN;Acc:ZDB-GENE-051201-1]
9. CR388015.1 CR388015.1 311 0.854 0.854 - - - - - - - -
10. knstrn ENSDARG00000074379 374 0.851 - - - - - - 0.851 - - kinetochore localized astrin (SPAG5) binding protein [Source:ZFIN;Acc:ZDB-GENE-081022-187]
11. MFAP4_6 MFAP4_6 162 0.849 0.849 - - - - - - - -
12. EML5 ENSDARG00000053517 74 0.847 0.847 - - - - - - - - echinoderm microtubule associated protein like 5 [Source:HGNC Symbol;Acc:HGNC:18197]
13. wdr12 ENSDARG00000003287 1026 0.847 - 0.847 - - - - - - - WD repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-030131-371]
14. TTF1 ENSDARG00000091967 307 0.846 - - - - - 0.846 - - - transcription termination factor, RNA polymerase I [Source:ZFIN;Acc:ZDB-GENE-030131-6913]
15. TSPAN4 TSPAN4 941 0.843 - 0.843 - - - - - - -
16. BRPF3 BRPF3 458 0.838 - 0.838 - - - - - - -
17. msto1 ENSDARG00000024381 298 0.834 - - - - - - 0.834 - - misato 1, mitochondrial distribution and morphology regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6238]
18. ZNF646 ENSDARG00000061424 1549 0.833 - 0.833 - - - - - - - zinc finger protein 646 [Source:ZFIN;Acc:ZDB-GENE-160627-3]
19. ctu2 ENSDARG00000051851 68 0.832 - - - - - 0.832 - - - cytosolic thiouridylase subunit 2 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040801-79]
20. cul1b ENSDARG00000007691 719 0.831 - 0.831 - - - - - - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
21. hook1 ENSDARG00000042946 452 0.83 0.830 - - - - - - - - hook microtubule-tethering protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-159]
22. tsga10 ENSDARG00000052512 79 0.822 - - - - - - 0.822 - - testis specific, 10 [Source:ZFIN;Acc:ZDB-GENE-061013-482]
23. slc12a3 ENSDARG00000013855 990 0.821 0.821 - - - - - - - - solute carrier family 12 (sodium/chloride transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9505]
24. meiob 75 0.82 - - - - - - 0.820 - - meiosis specific with OB domains
25. rabl5 rabl5 245 0.82 - - - - - - 0.820 - -
26. CABZ01021426.1 CABZ01021426.1 25 0.82 - - - - - - 0.820 - -
27. zp3b ENSDARG00000039828 15 0.82 - - - - - - 0.820 - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
28. lrriq1 ENSDARG00000093781 83 0.817 0.817 - - - - - - - - leucine-rich repeats and IQ motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-235]
29. wdr54 ENSDARG00000010248 245 0.816 - - - - - - 0.816 - - WD repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040801-151]
30. hic1 ENSDARG00000055493 219 0.816 - - - - - 0.816 - - - hypermethylated in cancer 1 [Source:ZFIN;Acc:ZDB-GENE-040713-2]
31. mamdc2a ENSDARG00000098345 21 0.816 - - - - - 0.816 - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
32. zgc:113060 zgc:113060 63 0.816 - - - - - 0.816 - - -
33. erap2 ENSDARG00000098618 16 0.816 - - - - - 0.816 - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
34. si:ch211-106h4.4 ENSDARG00000093629 9 0.816 - - - - - 0.816 - - - si:ch211-106h4.4 [Source:ZFIN;Acc:ZDB-GENE-070705-14]
35. CABZ01112249.1 CABZ01112249.1 1 0.816 - - - - - 0.816 - - -
36. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 0.816 - - - - - 0.816 - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
37. ctr9 ENSDARG00000009170 1265 0.815 - - - - - - 0.815 - - CTR9 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-3782]
38. thoc6 ENSDARG00000037966, ENSDARG00000110342, ENSDARG00000116948 554 0.813 - - - - - 0.813 - - - THO complex 6 [Source:ZFIN;Acc:ZDB-GENE-041010-198]
39. U3_2 U3_2 669 0.812 - 0.812 - - - - - - -
40. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.81 0.810 - - - - - - - - nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
41. slx4ip ENSDARG00000039069 260 0.809 0.809 - - - - - - - - SLX4 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1365]
42. rit1 ENSDARG00000069150 520 0.809 - - - - - - 0.809 - - Ras-like without CAAX 1 [Source:ZFIN;Acc:ZDB-GENE-070912-329]
43. zgc:113377 335 0.809 - 0.809 - - - - - - - zgc:113377, transcript variant X2
44. ispd ENSDARG00000005034 173 0.808 - 0.808 - - - - - - - isoprenoid synthase domain containing [Source:ZFIN;Acc:ZDB-GENE-061110-16]
45. clcnk ENSDARG00000022560 355 0.808 0.808 - - - - - - - - chloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
46. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 0.805 0.805 - - - - - - - - vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
47. gemin2 ENSDARG00000015638 886 0.805 - - - - - 0.805 - - - gem (nuclear organelle) associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3756]
48. BX323051.1 ENSDARG00000099065 1758 0.803 - 0.803 - - - - - - -
49. tram2 ENSDARG00000030092 1906 0.803 - 0.803 - - - - - - - translocation associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2024]
50. rbfa ENSDARG00000073705 601 0.803 - - - - - 0.803 - - - ribosome binding factor A [Source:ZFIN;Acc:ZDB-GENE-070410-83]
51. zgc:174563_1 zgc:174563_1 146 0.802 0.802 - - - - - - - -
52. cx39.9 ENSDARG00000004082 148 0.802 - - - - - 0.802 - - - connexin 39.9 [Source:ZFIN;Acc:ZDB-GENE-040406-2]
53. si:dkey-26i13.8 ENSDARG00000062606 13 0.802 - - - - - 0.802 - - - si:dkey-26i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-134]
54. mtx3_1 ENSDARG00000090195 12 0.802 - - - - - 0.802 - - - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
55. pcyt1aa ENSDARG00000011233 1985 0.801 - 0.801 - - - - - - - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
56. ggctb ENSDARG00000005085 704 0.801 - 0.801 - - - - - - - gamma-glutamylcyclotransferase b [Source:ZFIN;Acc:ZDB-GENE-040426-1939]
57. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 0.801 - 0.801 - - - - - - - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
58. gucy2c ENSDARG00000014320, ENSDARG00000116238 322 0.8 0.800 - - - - - - - - guanylate cyclase 2C [Source:ZFIN;Acc:ZDB-GENE-091118-67]
59. cnpy2 ENSDARG00000007207 241 0.8 - - - - - 0.800 - - - canopy FGF signaling regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060315-4]
60. col8a2 ENSDARG00000060893 504 0.799 - 0.799 - - - - - - - collagen, type VIII, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060503-488]
61. fgfrl1b ENSDARG00000052556, ENSDARG00000110034 240 0.798 0.798 - - - - - - - - fibroblast growth factor receptor like 1b [Source:ZFIN;Acc:ZDB-GENE-050201-3]
62. wdr48 wdr48 383 0.798 0.798 - - - - - - - -
63. FOXO6_1 FOXO6_1 73 0.798 - - - - - 0.798 - - -
64. BX001033.2 BX001033.2 857 0.798 - 0.798 - - - - - - -
65. TRAPPC9 ENSDARG00000099118 26 0.798 - - - - - 0.798 - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
66. slc25a12 ENSDARG00000102362 2773 0.796 - 0.796 - - - - - - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
67. sssca1 ENSDARG00000069109, ENSDARG00000114402 193 0.796 - 0.796 - - - - - - - Sjogren syndrome/scleroderma autoantigen 1 [Source:ZFIN;Acc:ZDB-GENE-041010-102]
68. si:dkey-114c15.5 ENSDARG00000095150 70 0.796 - - - - - - 0.796 - - si:dkey-114c15.5 [Source:ZFIN;Acc:ZDB-GENE-060531-72]
69. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 0.796 - - - - - - 0.796 - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
70. si:rp71-45g20.6 si:rp71-45g20.6 19 0.796 - - - - - - 0.796 - -
71. CABZ01081748.1 ENSDARG00000102139 31 0.796 - - - - - - 0.796 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
72. dph2 ENSDARG00000078077 36 0.796 - - - - - - 0.796 - - DPH2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030219-100]
73. CU655961.3 ENSDARG00000106724 14 0.796 - - - - - - 0.796 - -
74. tmem237a ENSDARG00000041735 13 0.796 - - - - - - 0.796 - - transmembrane protein 237a [Source:ZFIN;Acc:ZDB-GENE-070402-3]
75. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 0.796 - - - - - - 0.796 - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
76. rab30 ENSDARG00000037884 1077 0.794 - 0.794 - - - - - - - RAB30, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-250]
77. acot9.2 ENSDARG00000058390, ENSDARG00000113544 438 0.794 - - - - - 0.794 - - - acyl-CoA thioesterase 9, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-051113-136]
78. dixdc1a ENSDARG00000025302 716 0.793 - - - - - - 0.793 - - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
79. CU596012.2 CU596012.2 1046 0.791 0.791 - - - - - - - -
80. ttll6 ENSDARG00000054023, ENSDARG00000109623 147 0.79 - - - - - - 0.790 - - tubulin tyrosine ligase-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080107-1]
81. HAP1 HAP1 481 0.789 - 0.789 - - - - - - -
82. tbx18 ENSDARG00000036930 390 0.788 - 0.788 - - - - - - - T-box 18 [Source:ZFIN;Acc:ZDB-GENE-020529-2]
83. lrmp ENSDARG00000045574 26 0.788 - - - - - 0.788 - - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
84. vipr1b ENSDARG00000059058 62 0.787 - - - - - - 0.787 - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
85. si:ch211-32p8.2 si:ch211-32p8.2 25 0.786 0.786 - - - - - - - -
86. ddhd2 ENSDARG00000076765 29 0.786 0.786 - - - - - - - - DDHD domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080519-4]
87. steap4 ENSDARG00000055901 61 0.786 0.786 - - - - - - - - STEAP family member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-244]
88. urad ENSDARG00000071579, ENSDARG00000115541 46 0.786 0.786 - - - - - - - - ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070112-472]
89. ptpn21 ENSDARG00000062248 2010 0.786 - 0.786 - - - - - - - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
90. WIZ WIZ 1188 0.786 - - - - - - 0.786 - -
91. C13H2orf50 C13H2orf50 87 0.786 0.786 - - - - - - - -
92. wu:fb11h05 wu:fb11h05 126 0.786 0.786 - - - - - - - -
93. si:dkey-11d20.4 si:dkey-11d20.4 6 0.786 0.786 - - - - - - - -
94. CR762480.3 CR762480.3 3 0.786 0.786 - - - - - - - -
95. CAPN2 CAPN2 1497 0.786 0.786 - - - - - - - -
96. nle1 ENSDARG00000057105 522 0.786 - - - - - 0.786 - - - notchless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050522-321]
97. cttnbp2nl cttnbp2nl 166 0.786 0.786 - - - - - - - -
98. BX324215.3 BX324215.3 12 0.786 0.786 - - - - - - - -
99. msh6 ENSDARG00000104541 197 0.785 - - - - - - 0.785 - - mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]
100. mavs ENSDARG00000069733 311 0.785 0.785 - - - - - - - - mitochondrial antiviral signaling protein [Source:ZFIN;Acc:ZDB-GENE-070112-1402]

There are 427 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA