Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sfr1

Gene Name Gene ID Reads Annotation
sfr1 ENSDARG00000021974 45 SWI5-dependent homologous recombination repair protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-27]










Genes with expression patterns similar to sfr1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sfr1 ENSDARG00000021974 45 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 SWI5-dependent homologous recombination repair protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-27]
2. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1.78 - - - - - - 0.863 0.917 - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
3. sc:d0139 sc:d0139 233 1.774 - 0.901 0.873 - - - - - -
4. wdr92 ENSDARG00000037334 329 1.716 - 0.835 - - - - 0.881 - - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
5. AC024175.11 AC024175.11 12 1.672 0.805 - 0.867 - - - - - -
6. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 1.64 0.805 - - - 0.835 - - - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
7. plce1 ENSDARG00000087921 44 1.555 - - - - - - 0.713 0.842 - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
8. rims1a ENSDARG00000074680 143 1.523 - - - - 0.775 - 0.748 - - regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
9. gbp3 ENSDARG00000003244 90 1.518 0.805 - - - - - 0.713 - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
10. pofut2 ENSDARG00000045175 6 1.518 0.805 - - - - - 0.713 - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
11. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1.515 - - 0.802 - - - 0.713 - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
12. nlgn3a ENSDARG00000104786 91 1.502 - - 0.753 - - - 0.749 - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
13. rereb ENSDARG00000075670 136 1.5 - - 0.786 - - - 0.714 - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
14. arhgef6 ENSDARG00000006683 59 1.449 - 0.736 - - - - 0.713 - - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-101013-2]
15. RASGRF2 RASGRF2 644 1.41 - 0.710 - - 0.700 - - - -
16. amigo3 ENSDARG00000074469 39 1 1.000 - - - - - - - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
17. ankrd33aa ENSDARG00000055638 6 1 1.000 - - - - - - - - ankyrin repeat domain 33Aa [Source:ZFIN;Acc:ZDB-GENE-080520-2]
18. KCNB2 ENSDARG00000088842 35 1 1.000 - - - - - - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
19. si:ch211-198k9.10 si:ch211-198k9.10 47 1 - - - - - - 1.000 - -
20. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1 - - - - - - 1.000 - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
21. si:dkeyp-104f11.9 ENSDARG00000096715 81 1 - - - - - - 1.000 - - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
22. LPHN1_2 LPHN1_2 19 1 - - - - - - 1.000 - -
23. ngb ENSDARG00000053475, ENSDARG00000116651 33 1 - - - - - - 1.000 - - neuroglobin [Source:ZFIN;Acc:ZDB-GENE-011102-1]
24. si:ch211-210h11.7 si:ch211-210h11.7 32 0.97 - - - - 0.970 - - - -
25. CR524823.3 CR524823.3 124 0.967 - 0.967 - - - - - - -
26. si:ch211-209f23.3 ENSDARG00000095607 15 0.967 - 0.967 - - - - - - - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
27. zgc:162576 zgc:162576 56 0.961 - - - - - - 0.961 - -
28. lyve1b ENSDARG00000062483 14 0.959 - - - - 0.959 - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
29. foxn1 ENSDARG00000011879 22 0.957 - - - - 0.957 - - - - forkhead box N1 [Source:ZFIN;Acc:ZDB-GENE-021008-1]
30. crygm2d5 ENSDARG00000069792 207 0.957 - - - - 0.957 - - - - crystallin, gamma M2d5 [Source:ZFIN;Acc:ZDB-GENE-060918-4]
31. zgc:86723 zgc:86723 299 0.953 - - - - 0.953 - - - -
32. nfixb ENSDARG00000061836 7 0.95 - - - - 0.950 - - - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
33. ZNF337_9 ZNF337_9 18 0.95 - - - - - - - 0.950 -
34. C3H17orf104 C3H17orf104 16 0.95 - - - - 0.950 - - - -
35. lnx2a ENSDARG00000029177, ENSDARG00000112805 121 0.949 - - - - - - 0.949 - - ligand of numb-protein X 2a [Source:ZFIN;Acc:ZDB-GENE-060228-2]
36. si:ch211-266l9.1 si:ch211-266l9.1 18 0.949 - - - - - - 0.949 - -
37. si:ch73-261i21.2 ENSDARG00000095975 9 0.947 - - - - 0.947 - - - - si:ch73-261i21.2 [Source:ZFIN;Acc:ZDB-GENE-110411-164]
38. BX321870.1 ENSDARG00000098519 9 0.945 - - - - 0.945 - - - -
39. si:dkey-253d23.8 ENSDARG00000094427 26 0.944 - - - - 0.944 - - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
40. adcy2a ENSDARG00000058392 13 0.942 - - - - 0.942 - - - - adenylate cyclase 2a [Source:ZFIN;Acc:ZDB-GENE-061109-1]
41. si:ch211-196f5.2 ENSDARG00000041492 29 0.942 - - - - 0.942 - - - - si:ch211-196f5.2 [Source:ZFIN;Acc:ZDB-GENE-041014-306]
42. rab3gap2 ENSDARG00000044136 4 0.942 - - - - 0.942 - - - - RAB3 GTPase activating protein subunit 2 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-030616-610]
43. ghrh ENSDARG00000069481, ENSDARG00000111551 9 0.94 - - - - 0.940 - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
44. plac8.2 ENSDARG00000094438 3 0.94 - - - - 0.940 - - - - placenta-specific 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070424-12]
45. rargb ENSDARG00000054003 7 0.94 - - - - 0.940 - - - - retinoic acid receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-070314-1]
46. b3gnt7 ENSDARG00000038489 29 0.94 - - - - 0.940 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-021210-4]
47. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 0.94 - - - - 0.940 - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
48. si:ch211-234p6.9 ENSDARG00000095730 3 0.94 - - - - 0.940 - - - - si:ch211-234p6.9 [Source:ZFIN;Acc:ZDB-GENE-060503-33]
49. si:dkeyp-9d4.2 ENSDARG00000029720 9 0.94 - - - - 0.940 - - - - si:dkeyp-9d4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-156]
50. PEG3_24 PEG3_24 5 0.94 - - - - 0.940 - - - -
51. si:dkey-27f16.4 si:dkey-27f16.4 4 0.94 - - - - 0.940 - - - -
52. si:dkey-196n19.5 si:dkey-196n19.5 6 0.94 - - - - 0.940 - - - -
53. si:dkey-199f5.4 ENSDARG00000110483 4 0.94 - - - - 0.940 - - - - si:dkey-199f5.4 [Source:ZFIN;Acc:ZDB-GENE-100922-53]
54. impact ENSDARG00000043288 7 0.94 - - - - 0.940 - - - - impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10]
55. mapk15 ENSDARG00000100822 157 0.939 0.939 - - - - - - - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
56. nrros ENSDARG00000071491, ENSDARG00000112102 64 0.939 - - - - 0.939 - - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
57. rag1 ENSDARG00000052122 13 0.938 - - - - 0.938 - - - - recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
58. BX511006.2 BX511006.2 29 0.937 - - - - 0.937 - - - -
59. si:dkeyp-72h1.1 ENSDARG00000095347 7 0.937 - - - - 0.937 - - - - si:dkeyp-72h1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-447]
60. crygm2d16 ENSDARG00000076790 129 0.937 - - - - 0.937 - - - - crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53]
61. RPS11 ENSDARG00000053058 32 0.936 - - - - 0.936 - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
62. LRTM1 ENSDARG00000098742 21 0.936 - - - - 0.936 - - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
63. U6_18 U6_18 12 0.935 - - - - 0.935 - - - -
64. zgc:158852 ENSDARG00000102076 65 0.932 0.932 - - - - - - - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
65. GABRA2 ENSDARG00000113737 5 0.928 - - - - 0.928 - - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
66. RNF39 RNF39 52 0.925 - - - - 0.925 - - - -
67. cx30.9 ENSDARG00000070362 17 0.918 - - - - 0.918 - - - - connexin 30.9 [Source:ZFIN;Acc:ZDB-GENE-050616-2]
68. MTERFD2 MTERFD2 140 0.917 - 0.917 - - - - - - -
69. ciz1a ENSDARG00000089781 20 0.916 - - - - 0.916 - - - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
70. CCDC176 CCDC176 118 0.914 - - - - - - 0.914 - -
71. tpi1a ENSDARG00000025012 562 0.911 - - - - - - 0.911 - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
72. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 0.911 - - - - 0.911 - - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
73. tbx5a ENSDARG00000024894 9 0.909 - - - - - - - 0.909 - T-box 5a [Source:ZFIN;Acc:ZDB-GENE-991124-7]
74. si:dkey-63d15.12 ENSDARG00000075480 9 0.909 - - - - - - - 0.909 - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
75. si:ch211-113a14.10 si:ch211-113a14.10 2 0.909 - - - - - - - 0.909 -
76. ZNF70 ZNF70 2 0.909 - - - - - - - 0.909 -
77. LAMB3 LAMB3 31 0.909 - - - - - - - 0.909 -
78. VMAC ENSDARG00000110997 2 0.909 - - - - - - - 0.909 - vimentin type intermediate filament associated coiled-coil protein [Source:HGNC Symbol;Acc:HGNC:33803]
79. adck4 7 0.909 - - - - - - - 0.909 - aarF domain containing kinase 4, transcript variant X2
80. TGM1 ENSDARG00000017799 3 0.909 - - - - - - - 0.909 - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
81. HIST2H4A HIST2H4A 33 0.909 - - - - - - - 0.909 -
82. si:dkey-211i20.2 ENSDARG00000103003 1 0.909 - - - - - - - 0.909 - si:dkey-211i20.2 [Source:ZFIN;Acc:ZDB-GENE-081027-6]
83. wu:fj39g12 ENSDARG00000043460 8 0.909 - - - - - - - 0.909 - wu:fj39g12 [Source:ZFIN;Acc:ZDB-GENE-030131-7901]
84. rhcga ENSDARG00000003203 7 0.909 - - - - - - - 0.909 - Rh family, C glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-070424-81]
85. PBX4 ENSDARG00000052150 1 0.909 - - - - - - - 0.909 - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
86. GTPBP6 ENSDARG00000061091 29 0.908 - - - - - - 0.908 - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
87. sla2 ENSDARG00000020788, ENSDARG00000115055 13 0.908 - - - - - - 0.908 - - Src-like-adaptor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-98]
88. si:dkey-28d5.2 si:dkey-28d5.2 2 0.908 - - - - - - - 0.908 -
89. CT955963.1 ENSDARG00000100370 23 0.907 - - - - - - - 0.907 -
90. LAMA3 ENSDARG00000071462 5 0.907 - - - - - - - 0.907 - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
91. CU182107.1 ENSDARG00000103081 2 0.906 - - - - - - - 0.906 -
92. pyyb ENSDARG00000035832 18 0.905 - - - - - - 0.905 - - peptide YYb [Source:ZFIN;Acc:ZDB-GENE-060215-2]
93. cbr1 ENSDARG00000036587 78 0.905 - - - - - - 0.905 - - carbonyl reductase 1 [Source:ZFIN;Acc:ZDB-GENE-030902-2]
94. si:ch211-218d20.10 si:ch211-218d20.10 4 0.901 - - 0.901 - - - - - -
95. si:ch211-214b16.3 ENSDARG00000089079 8 0.901 - - 0.901 - - - - - - si:ch211-214b16.3 [Source:ZFIN;Acc:ZDB-GENE-081105-50]
96. si:dkey-79c1.1 ENSDARG00000093179 11 0.901 - - 0.901 - - - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
97. CU658147.2 CU658147.2 2 0.901 - - 0.901 - - - - - -
98. SLCO5A1 SLCO5A1 6 0.901 - - 0.901 - - - - - -
99. pacrg ENSDARG00000087556 25 0.901 - - 0.901 - - - - - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
100. si:dkeyp-110e4.3 si:dkeyp-110e4.3 2 0.901 - - 0.901 - - - - - -

There are 620 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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