Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sfpq

Gene Name Gene ID Reads Annotation
sfpq ENSDARG00000011564, ENSDARG00000115611 15626 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]










Genes with expression patterns similar to sfpq

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
2. sf1 ENSDARG00000008188 5142 3.952 - - - 0.704 0.727 - 0.781 0.840 0.900 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
3. wu:fq41a10 wu:fq41a10 7009 3.431 0.926 - - 0.786 - 0.951 0.768 - -
4. nono ENSDARG00000020482, ENSDARG00000115783 12482 3.416 - - - 0.837 0.904 - - 0.812 0.863 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
5. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 3.34 - 0.935 0.764 - - - 0.768 - 0.873 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
6. GATAD2B ENSDARG00000005834 3855 3.337 - 0.927 - 0.742 - - 0.783 - 0.885 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
7. tox ENSDARG00000032317 9126 3.273 - - 0.798 - - - 0.775 0.822 0.878 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
8. nrarpb ENSDARG00000018958 6225 3.268 - - - 0.840 - - 0.727 0.830 0.871 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
9. MKI67 ENSDARG00000091150 11038 3.237 - - 0.869 0.781 - - 0.830 - 0.757 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
10. CR936437.1 CR936437.1 6465 3.217 - - - 0.795 - - 0.797 0.762 0.863
11. lbr ENSDARG00000014013 4835 3.217 - - 0.803 0.762 - - 0.779 - 0.873 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
12. srsf2a ENSDARG00000057484 25721 3.174 - - - 0.780 - 0.944 - 0.702 0.748 serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
13. tmpob ENSDARG00000022978 8121 3.16 - - - 0.738 - - 0.793 0.756 0.873 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
14. nova2 ENSDARG00000017673 7685 3.077 - - 0.857 0.774 - - 0.708 - 0.738 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
15. ccnl1b ENSDARG00000012140 1639 3.005 - - - 0.722 - 0.825 0.714 - 0.744 cyclin L1b [Source:ZFIN;Acc:ZDB-GENE-030131-4813]
16. npm1b ENSDARG00000037675 5448 2.979 - - 0.701 0.770 - - 0.793 - 0.715 nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
17. jarid2b ENSDARG00000062268 2206 2.933 - - - 0.704 0.718 - 0.715 - 0.796 jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
18. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.819 0.966 - - - - - 0.899 - 0.954 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
19. chmp2bb ENSDARG00000002190 4629 2.68 0.947 0.948 - - - 0.785 - - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
20. sumo3a ENSDARG00000028119 13447 2.665 - - - 0.872 - - 0.902 - 0.891 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
21. akirin2 ENSDARG00000058729 13245 2.648 - 0.924 0.840 - - - 0.884 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
22. fubp1 ENSDARG00000029248 15259 2.638 - 0.937 - 0.822 - 0.879 - - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
23. hnrnpub ENSDARG00000004735 16496 2.635 - - - 0.830 - - 0.850 - 0.955 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
24. wu:fk48d07 wu:fk48d07 13245 2.606 - 0.853 - - - 0.875 - - 0.878
25. smarca5 ENSDARG00000052348 15433 2.603 0.916 - - - - - 0.789 - 0.898 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
26. hnrpl 6412 2.588 0.953 - - - - - 0.771 - 0.864 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
27. khsrp ENSDARG00000026489 15738 2.583 - - - - - - 0.923 0.843 0.817 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
28. MAP4K4 ENSDARG00000098670 4665 2.554 - 0.918 - - 0.752 - - - 0.884 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
29. tmem35 ENSDARG00000052567 5685 2.552 - - - 0.817 - - - 0.834 0.901 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
30. ezh2 ENSDARG00000010571 3273 2.546 - - - 0.867 - - 0.800 - 0.879 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
31. kdm1a ENSDARG00000060679 6152 2.537 - - - 0.765 - 0.885 0.887 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
32. h2afva ENSDARG00000068820 16427 2.537 - - 0.844 0.786 - - 0.907 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
33. ddx39ab ENSDARG00000015111 11619 2.535 - - - - - - 0.862 0.831 0.842 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
34. stmn1a ENSDARG00000004169 21169 2.532 - - - - - 0.844 0.841 - 0.847 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
35. HNRNPAB HNRNPAB 22267 2.531 - - 0.759 - - - 0.905 - 0.867
36. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 2.527 - - - - - 0.841 0.834 - 0.852 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
37. hmgb2b ENSDARG00000053990 11519 2.525 - - - - - - 0.877 0.720 0.928 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
38. whsc1l1 8544 2.515 - - - - - - 0.862 0.801 0.852 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
39. kpna2 ENSDARG00000038066 7954 2.515 - 0.939 - 0.760 - - - - 0.816 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
40. ube2i ube2i 13024 2.508 0.924 - - 0.722 - - 0.862 - -
41. srsf11 ENSDARG00000098574 12801 2.506 0.932 - - - - - 0.826 - 0.748 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
42. snrpc ENSDARG00000009871 9567 2.505 - - - 0.794 - - 0.813 - 0.898 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
43. tgif1 ENSDARG00000059337 4020 2.498 - - - 0.790 - - 0.843 - 0.865 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
44. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 2.497 - - - - - 0.883 0.768 - 0.846 max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
45. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 2.492 - 0.945 - - - - 0.759 0.788 - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
46. hnrnpm ENSDARG00000061735 19428 2.491 - - - 0.805 - - - 0.844 0.842 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
47. tle2 5014 2.491 - - - 0.804 - - 0.840 0.847 - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
48. wu:fc51f04 wu:fc51f04 7074 2.488 0.930 - 0.745 - - - - - 0.813
49. zgc:77262 ENSDARG00000044545 5563 2.487 - - - - - 0.868 0.797 0.822 - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
50. snrpd3l ENSDARG00000076283 7655 2.474 - - - 0.736 - - 0.833 - 0.905 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
51. nr2f2 ENSDARG00000040926 5213 2.469 - - - 0.787 - - 0.853 0.829 - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
52. si:dkey-42i9.4 ENSDARG00000008049 4752 2.459 0.972 - - - 0.756 - 0.731 - - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
53. marcksl1b ENSDARG00000035715 37390 2.458 - - - 0.782 0.800 - - - 0.876 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
54. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.451 - - 0.832 0.784 - - 0.835 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
55. cux1a ENSDARG00000078459 3914 2.445 - - - - - 0.893 0.789 - 0.763 cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868]
56. myef2 ENSDARG00000059398 6050 2.44 - - - 0.802 - - 0.810 - 0.828 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
57. SNRPG ENSDARG00000099667 18697 2.436 - - - 0.789 - - 0.726 - 0.921 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
58. lrrc40 ENSDARG00000017708 1156 2.435 0.942 - - - - - 0.744 - 0.749 leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
59. bcl11ab ENSDARG00000063153 3032 2.43 - - - 0.714 - - 0.816 - 0.900 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
60. puf60a ENSDARG00000032175 5618 2.422 - - - 0.728 - - 0.855 - 0.839 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
61. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 2.416 0.919 - - 0.716 - - 0.781 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
62. taf9 ENSDARG00000077870 6992 2.416 - 0.887 - - - - 0.804 - 0.725 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
63. cbx3a ENSDARG00000003860 4922 2.41 - - 0.800 - - 0.840 - - 0.770 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
64. txnrd1 11401 2.397 0.949 - - - - - 0.705 - 0.743 thioredoxin reductase 1
65. snrpf ENSDARG00000105037 10241 2.395 - - - 0.846 - - 0.830 0.719 - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
66. top1l ENSDARG00000070545 40529 2.391 - - - 0.791 - - 0.881 0.719 - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
67. kpnb1 ENSDARG00000104889 9282 2.377 - - - 0.788 - - - 0.746 0.843 karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
68. cdk6 ENSDARG00000070228 1778 2.369 - - - 0.732 - - 0.840 - 0.797 cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
69. carm1 ENSDARG00000018698 5599 2.368 - - - 0.719 - - 0.854 - 0.795 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
70. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.364 - 0.903 - - - - 0.701 - 0.760 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
71. lmnb2 ENSDARG00000101624 11304 2.364 0.820 - - 0.744 - - - - 0.800 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
72. pcdh19 ENSDARG00000034344 2378 2.362 - - - 0.752 - - 0.727 - 0.883 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
73. snrpb ENSDARG00000011125 11729 2.358 0.857 - - 0.776 - - 0.725 - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
74. mta2 ENSDARG00000013031 2932 2.358 - - - 0.781 - - 0.845 - 0.732 metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
75. llgl1 ENSDARG00000009693 4205 2.352 - - - 0.701 - 0.892 0.759 - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
76. srsf4 ENSDARG00000105293 9657 2.345 - - 0.829 0.742 - - 0.774 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
77. kif22 ENSDARG00000102624 3694 2.335 - - - 0.706 - - 0.790 - 0.839 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
78. fam60al 2846 2.327 - - - 0.735 - - 0.829 - 0.763 family with sequence similarity 60, member A, like
79. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.324 - - - 0.780 - - 0.815 - 0.729 cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
80. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.318 - - - 0.765 - - 0.824 - 0.729 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
81. txnl4a ENSDARG00000036190 2048 2.311 - - - 0.711 - 0.842 0.758 - - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
82. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 2.308 - - - - 0.764 - 0.810 - 0.734 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
83. ppp2cb ENSDARG00000099241, ENSDARG00000111489 25466 2.298 - - - 0.727 - 0.782 0.789 - - protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
84. lfng ENSDARG00000037879 11783 2.297 - - 0.707 0.770 - - - - 0.820 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
85. psmb7 ENSDARG00000037962 11542 2.297 - - 0.726 - - - 0.744 - 0.827 proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
86. msl2a ENSDARG00000038909 1357 2.295 - - - 0.718 - - 0.761 - 0.816 male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
87. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 2.29 - - - 0.733 - - 0.852 - 0.705 polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
88. insm1b ENSDARG00000053301 2032 2.28 - - - 0.710 - - - 0.723 0.847 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
89. mad2l1 ENSDARG00000004713 3398 2.274 - - - 0.749 - - 0.713 - 0.812 MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
90. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 2.267 - - - 0.740 - - 0.722 - 0.805 LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
91. stmn1b ENSDARG00000033655 9491 2.265 - - - - 0.726 - 0.710 0.829 - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
92. ccne2 ENSDARG00000098529 4695 2.263 - - 0.733 0.791 - - 0.739 - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
93. IM:7163548 IM:7163548 6540 2.256 - - - 0.773 0.745 - 0.738 - -
94. cpsf3 ENSDARG00000027649 6897 2.247 - - 0.769 0.717 - - 0.761 - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
95. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 2.237 - - - 0.776 0.714 - - - 0.747 stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
96. hmga1a ENSDARG00000028335 254077 2.235 - - - 0.700 0.703 0.832 - - - high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
97. SCAF8 1618 2.226 - - - 0.712 - - 0.744 - 0.770 SR-related CTD-associated factor 8, transcript variant X3
98. tmpoa ENSDARG00000007315 3638 2.222 - - - 0.720 0.713 - 0.789 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
99. ncapd2 ENSDARG00000005058 2819 2.221 - - - 0.716 - - 0.752 - 0.753 non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
100. pacsin1b ENSDARG00000042128 1051 2.211 - - - - - - 0.725 0.770 0.716 protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]

There are 2009 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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