Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sfi1

Gene Name Gene ID Reads Annotation
sfi1 ENSDARG00000053992 1075 SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]










Genes with expression patterns similar to sfi1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sfi1 ENSDARG00000053992 1075 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
2. TP53BP2 TP53BP2 217 2.608 - 0.833 - 0.969 - - 0.806 - -
3. lyrm5b ENSDARG00000045827 91 2.576 - 0.887 - - - 0.952 0.737 - - LYR motif containing 5b [Source:ZFIN;Acc:ZDB-GENE-070424-20]
4. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 2.497 0.816 0.853 - - - 0.828 - - -
5. snapc1b ENSDARG00000003827 422 2.408 0.736 - - 0.946 - 0.726 - - - small nuclear RNA activating complex, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-716]
6. TSHZ2 ENSDARG00000079201 301 2.34 0.772 0.751 - - - - 0.817 - - teashirt zinc finger homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-100322-2]
7. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 1.886 - - - 0.968 - - 0.918 - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
8. TTC17 ENSDARG00000044812 124 1.878 - - - 0.957 - 0.921 - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
9. rab14 ENSDARG00000074246 4084 1.857 - - - - - 0.859 - - 0.998 RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
10. SYNGAP1_1 SYNGAP1_1 66 1.854 - - - 0.959 - - 0.895 - -
11. fbxw11a ENSDARG00000104806 1815 1.854 - - - - - 0.856 - - 0.998 F-box and WD repeat domain containing 11a [Source:ZFIN;Acc:ZDB-GENE-030131-6305]
12. CR388132.1 ENSDARG00000097728 61 1.853 0.944 - - - - - 0.909 - -
13. wasb ENSDARG00000026350 139 1.848 0.885 - - 0.963 - - - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
14. znf668 ENSDARG00000025226, ENSDARG00000112533 177 1.844 - 0.933 - - - 0.911 - - - zinc finger protein 668 [Source:ZFIN;Acc:ZDB-GENE-041001-46]
15. rs1 rs1 70 1.841 0.872 - - 0.969 - - - - -
16. si:dkey-45k15.1 ENSDARG00000061714 32 1.839 - 0.930 - - - - 0.909 - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
17. trappc2 ENSDARG00000097660 760 1.834 - 0.927 - 0.907 - - - - - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
18. tnmd ENSDARG00000052615 42 1.821 - 0.915 - - - - 0.906 - - tenomodulin [Source:ZFIN;Acc:ZDB-GENE-080220-31]
19. hes2.2 ENSDARG00000068168 197 1.82 0.847 - - 0.973 - - - - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
20. si:dkey-50i6.5 ENSDARG00000101320 95 1.819 - 0.889 - - - 0.930 - - - si:dkey-50i6.5 [Source:ZFIN;Acc:ZDB-GENE-081031-53]
21. aar2 ENSDARG00000018658 297 1.815 - - - - - 0.935 0.880 - - AAR2 splicing factor homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040704-68]
22. uvrag ENSDARG00000023815 424 1.815 - 0.883 - 0.932 - - - - - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
23. bag5 ENSDARG00000017316 195 1.811 - 0.904 - - - 0.907 - - - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
24. MDFI ENSDARG00000089564 8 1.802 0.872 0.930 - - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
25. ntf7 ntf7 72 1.79 0.872 0.918 - - - - - - -
26. si:ch211-223a21.3 ENSDARG00000104737 28 1.79 0.872 0.918 - - - - - - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
27. fam86a fam86a 174 1.789 - 0.930 - - - 0.859 - - -
28. dixdc1b ENSDARG00000056267 307 1.784 - - - 0.948 - - 0.836 - - DIX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-041008-148]
29. pou5f3 ENSDARG00000044774 212 1.783 - 0.914 - - - - 0.869 - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
30. CU104697.1 CU104697.1 19 1.783 - 0.900 - - - - 0.883 - -
31. rnf150a_1 ENSDARG00000024827 12 1.781 0.872 - - - - - 0.909 - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
32. si:ch211-120c15.1 si:ch211-120c15.1 20 1.781 0.872 - - - - - 0.909 - -
33. adipoqa ENSDARG00000062228 7 1.781 0.872 - - - - - 0.909 - - adiponectin, C1Q and collagen domain containing, a [Source:ZFIN;Acc:ZDB-GENE-080423-2]
34. CABZ01074081.1 CABZ01074081.1 109 1.78 - - - - - 0.888 0.892 - -
35. LPL ENSDARG00000087697 18 1.779 0.872 - - - - - 0.907 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
36. smad4 smad4 2519 1.765 - - - - - - 0.765 - 1.000
37. si:dkey-3h3.3 ENSDARG00000067718 225 1.764 0.872 - - - - 0.892 - - - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
38. haus1 ENSDARG00000058968 1336 1.762 - - - - - 0.762 - - 1.000 HAUS augmin-like complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-091204-387]
39. ENDOD1_5 ENDOD1_5 8723 1.761 - - - 0.781 - - - - 0.980
40. ABCC6_1 ABCC6_1 403 1.76 - 0.800 - - - 0.960 - - -
41. GPR180 73 1.756 - - - 0.957 - - 0.799 - - G protein-coupled receptor 180, transcript variant X2
42. far1 ENSDARG00000006899 204 1.745 - - - 0.956 - - 0.789 - - fatty acyl CoA reductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2908]
43. si:dkey-18j14.4 si:dkey-18j14.4 60 1.743 - 0.893 - - - 0.850 - - -
44. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 1.739 - 0.785 - 0.954 - - - - - patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
45. CU570791.5 CU570791.5 872 1.739 - - - 0.897 - 0.842 - - -
46. cmtm6 ENSDARG00000099631 641 1.736 - - - 0.959 - 0.777 - - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
47. si:dkey-161j23.5 ENSDARG00000094441 11 1.733 0.872 0.861 - - - - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
48. CABZ01072607.1 ENSDARG00000113761 784 1.73 - - - - - 0.901 0.829 - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
49. CR356223.4 CR356223.4 42 1.729 - 0.937 - - - - 0.792 - -
50. si:dkey-3d4.1 si:dkey-3d4.1 37 1.728 - - - - - 0.921 0.807 - -
51. polr3a ENSDARG00000102569 1072 1.727 - - - 0.824 - 0.903 - - - polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
52. prkx ENSDARG00000060716 530 1.725 - 0.853 - 0.872 - - - - - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
53. CR848664.3 CR848664.3 183 1.723 - 0.790 - - - - 0.933 - -
54. slc3a1 ENSDARG00000017165 136 1.723 - - - 0.961 - - 0.762 - - solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-225]
55. ercc5 ENSDARG00000023678 468 1.722 - - - - - 0.799 0.923 - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
56. C16H8orf76 C16H8orf76 329 1.721 - 0.788 - - - 0.933 - - -
57. aff2 ENSDARG00000052242 540 1.719 - 0.850 - - - 0.869 - - - AF4/FMR2 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-110411-190]
58. ADCY3 ADCY3 537 1.719 - - - 0.962 - - 0.757 - -
59. ccdc173 ENSDARG00000077928 260 1.708 0.759 - - 0.949 - - - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
60. tnip1 ENSDARG00000015653 94 1.704 - 0.865 - - - 0.839 - - - TNFAIP3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1502]
61. nat15 ENSDARG00000061185 396 1.695 - - - 0.941 - 0.754 - - - N-acetyltransferase 15 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-041111-143]
62. arhgef7b ENSDARG00000073848 1249 1.694 - - - 0.946 - 0.748 - - - Rho guanine nucleotide exchange factor (GEF) 7b [Source:ZFIN;Acc:ZDB-GENE-041212-49]
63. CABZ01058863.1 CABZ01058863.1 28 1.686 0.760 - - - - 0.926 - - -
64. got1l1 ENSDARG00000053644 49 1.684 - 0.868 - - - - 0.816 - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
65. st18 663 1.677 0.755 - - 0.922 - - - - - suppression of tumorigenicity 18, zinc finger
66. tnfsf10l4 ENSDARG00000058068, ENSDARG00000111545 136 1.676 - 0.856 - - - 0.820 - - - tumor necrosis factor (ligand) superfamily, member 10 like 4 [Source:ZFIN;Acc:ZDB-GENE-050227-6]
67. snrnp25 ENSDARG00000020363 588 1.675 - - - 0.819 - 0.856 - - - small nuclear ribonucleoprotein 25 [Source:ZFIN;Acc:ZDB-GENE-050417-179]
68. znf710a ENSDARG00000014680 582 1.675 - - - 0.963 - - 0.712 - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
69. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.669 - 0.933 - - - 0.736 - - - phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
70. FYCO1 FYCO1 194 1.663 - 0.792 - - - - 0.871 - -
71. sod3b ENSDARG00000079183 39 1.661 - 0.709 - - - 0.952 - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
72. scube3 ENSDARG00000011490 227 1.661 0.707 - - 0.954 - - - - - signal peptide, CUB domain, EGF-like 3 [Source:ZFIN;Acc:ZDB-GENE-060717-1]
73. pqbp1 ENSDARG00000029724 1472 1.66 - - - 0.767 - 0.893 - - - polyglutamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-158]
74. ZNF135_5 ZNF135_5 73 1.655 - 0.761 - - - - 0.894 - -
75. B3GNT2_1 B3GNT2_1 380 1.654 - 0.747 - - - 0.907 - - -
76. eml3 ENSDARG00000058038 449 1.649 - 0.798 - - - 0.851 - - - echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
77. cbx1b ENSDARG00000054442 1206 1.647 - 0.773 - 0.874 - - - - - chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
78. elp2 ENSDARG00000017199 399 1.645 - - - - - 0.873 0.772 - - elongator acetyltransferase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060503-525]
79. irg1l ENSDARG00000062788 503 1.637 - 0.708 - - - 0.929 - - - immunoresponsive gene 1, like [Source:ZFIN;Acc:ZDB-GENE-061103-301]
80. brap ENSDARG00000008560 821 1.635 - 0.845 - - - 0.790 - - - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
81. RUNDC1 ENSDARG00000091962 693 1.633 - 0.814 - - - 0.819 - - - RUN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25418]
82. st6galnac ENSDARG00000086292 29 1.633 0.703 0.930 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
83. postna ENSDARG00000043806 143 1.631 - 0.891 - - - - 0.740 - - periostin, osteoblast specific factor a [Source:ZFIN;Acc:ZDB-GENE-091113-23]
84. ddx31 ENSDARG00000035507 167 1.63 - 0.796 - - - 0.834 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
85. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1.63 0.872 - - - - - 0.758 - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
86. sorbs2a ENSDARG00000003046 242 1.63 - - - 0.833 - - 0.797 - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
87. CR932358.2 CR932358.2 15 1.618 - 0.760 - - - - 0.858 - -
88. wrap53 ENSDARG00000086150 975 1.612 - - - 0.832 - - 0.780 - - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
89. tctex1d1 ENSDARG00000103545 409 1.612 - 0.822 - - - 0.790 - - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
90. gtf2ird1 ENSDARG00000022203, ENSDARG00000112976 294 1.607 - 0.752 - - - 0.855 - - - GTF2I repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-010328-18]
91. wu:fb30e12 wu:fb30e12 1254 1.602 - 0.820 - 0.782 - - - - -
92. armc1l ENSDARG00000020887 1219 1.6 - - - 0.719 - 0.881 - - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
93. si:dkey-15h8.15 ENSDARG00000102601 335 1.599 - - - 0.750 - 0.849 - - - si:dkey-15h8.15 [Source:ZFIN;Acc:ZDB-GENE-050208-626]
94. tbrg1 ENSDARG00000074996 733 1.597 - - - 0.801 - - 0.796 - - transforming growth factor beta regulator 1 [Source:ZFIN;Acc:ZDB-GENE-080220-62]
95. CABZ01038514.1 CABZ01038514.1 724 1.597 - 0.734 - 0.863 - - - - -
96. cap1 ENSDARG00000016350 891 1.591 - 0.842 - - - 0.749 - - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
97. mmp11b ENSDARG00000016718 1136 1.59 - - - 0.884 - 0.706 - - - matrix metallopeptidase 11b [Source:ZFIN;Acc:ZDB-GENE-070817-2]
98. slc29a2 ENSDARG00000001767, ENSDARG00000115816 439 1.589 - - - 0.841 - 0.748 - - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
99. snupn ENSDARG00000008395 507 1.588 - - - 0.876 - 0.712 - - - snurportin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3464]
100. SLC47A1_2 SLC47A1_2 50 1.585 0.872 - - - - - 0.713 - -

There are 2203 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA