Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sf3b5

Gene Name Gene ID Reads Annotation
sf3b5 ENSDARG00000016855 4015 splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]










Genes with expression patterns similar to sf3b5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sf3b5 ENSDARG00000016855 4015 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
2. CBFA2T3 ENSDARG00000079012 6799 2.448 0.899 0.834 - - - 0.715 - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
3. meis2b ENSDARG00000077840 5166 2.371 0.769 0.822 - - - - 0.780 - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
4. cdc26 ENSDARG00000077815, ENSDARG00000115575 1460 2.355 - - - - - 0.769 0.765 0.821 - cell division cycle 26 homolog [Source:ZFIN;Acc:ZDB-GENE-040822-18]
5. fen1 ENSDARG00000011404 3358 2.269 - 0.805 - - - - 0.759 0.705 - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
6. lpl ENSDARG00000087697 2578 2.259 0.807 0.751 - - - 0.701 - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
7. wu:fb17g07 wu:fb17g07 10567 2.236 - 0.808 - - - 0.709 0.719 - -
8. rbb4l ENSDARG00000015208 5542 2.213 - - 0.705 - - 0.761 - 0.747 - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
9. puf60a ENSDARG00000032175 5618 2.207 - 0.740 0.739 - - - 0.728 - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
10. rprd1b ENSDARG00000038113 1105 2.207 - 0.706 - - - 0.710 - 0.791 - regulation of nuclear pre-mRNA domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-355]
11. tmsb ENSDARG00000054911 6411 2.206 - 0.760 0.702 - - 0.744 - - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
12. C19H6orf136 C19H6orf136 1387 2.15 - 0.724 - - - 0.720 0.706 - -
13. lypla2 ENSDARG00000053656 8971 2.149 0.740 0.707 - - - - 0.702 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
14. mrpl12 ENSDARG00000038768 5539 1.87 - 0.873 - - - - - - 0.997 mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
15. ptrhd1 ENSDARG00000016122 2705 1.825 - 0.828 - - - - - - 0.997 peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
16. zgc:77086 ENSDARG00000014015 4908 1.761 - 0.780 - - - - - - 0.981 zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
17. palld ENSDARG00000040009 2381 1.757 - 0.761 - - - - - - 0.996 palladin, cytoskeletal associated protein [Source:ZFIN;Acc:ZDB-GENE-041014-252]
18. ylpm1 ENSDARG00000043680 7676 1.739 - - - - - - 0.760 - 0.979 YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
19. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 1.732 - 0.735 - - - - - - 0.997 RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
20. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.712 - - - - - - 0.731 - 0.981 HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
21. st8sia6 ENSDARG00000021195 2244 1.707 0.902 0.805 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
22. NDNF ENSDARG00000062936 7287 1.704 - - - - - - 0.714 - 0.990 neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
23. syncripl ENSDARG00000026723 3889 1.695 0.934 - - - - - 0.761 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
24. tmem55a 1331 1.691 0.910 0.781 - - - - - - - transmembrane protein 55A
25. ubl7 ubl7 1435 1.671 0.930 - - - - - - 0.741 -
26. wu:fb15e04 wu:fb15e04 1713 1.669 0.867 - - - - - 0.802 - -
27. ptpn21 ENSDARG00000062248 2010 1.666 0.880 0.786 - - - - - - - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
28. bub3 ENSDARG00000075883 1333 1.664 0.868 - - - - - 0.796 - - BUB3 mitotic checkpoint protein [Source:ZFIN;Acc:ZDB-GENE-041010-210]
29. arglu1b ENSDARG00000018319 1110 1.658 0.892 0.766 - - - - - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
30. mrpl37 ENSDARG00000062916 1600 1.656 0.835 0.821 - - - - - - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
31. krr1 ENSDARG00000011246 1624 1.651 0.904 0.747 - - - - - - - KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060623-10]
32. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 1.648 0.910 0.738 - - - - - - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
33. mrps2 ENSDARG00000103198 2410 1.646 - 0.810 - - - 0.836 - - - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
34. ccdc85b ENSDARG00000061543 1309 1.633 - 0.808 - - - 0.825 - - - coiled-coil domain containing 85B [Source:ZFIN;Acc:ZDB-GENE-060130-56]
35. mrpl44 ENSDARG00000094277 1778 1.628 - 0.871 - - - 0.757 - - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
36. ttll4 ENSDARG00000078935 1663 1.627 0.837 0.790 - - - - - - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
37. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.623 0.880 0.743 - - - - - - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
38. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.622 0.881 - - - - 0.741 - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
39. chtopa ENSDARG00000057234 3287 1.621 - 0.761 - - - - - 0.860 - chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
40. hoxd10a ENSDARG00000057859 1498 1.618 0.841 - - - - - 0.777 - - homeobox D10a [Source:ZFIN;Acc:ZDB-GENE-990415-116]
41. mrpl11 ENSDARG00000013075 2927 1.613 0.796 - - - - - 0.817 - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
42. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 1.61 0.891 - - - - - 0.719 - - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
43. PHB2 PHB2 3755 1.609 - 0.848 - - - - 0.761 - -
44. kif1b ENSDARG00000037020 2124 1.609 0.908 - - - - - 0.701 - - kinesin family member 1B [Source:ZFIN;Acc:ZDB-GENE-030820-1]
45. farsa ENSDARG00000098825 2813 1.609 - 0.867 - - - - 0.742 - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
46. tpm1 ENSDARG00000087402 1666 1.609 0.897 - - - - - 0.712 - - tropomyosin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-854]
47. ncapd2 ENSDARG00000005058 2819 1.602 - - 0.735 - - - 0.867 - - non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
48. vapal ENSDARG00000115862 3108 1.601 0.851 - - - - - 0.750 - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
49. brd9 ENSDARG00000017143 936 1.596 0.875 0.721 - - - - - - - bromodomain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060502-1]
50. paf1 ENSDARG00000098432 1806 1.593 - 0.760 - - - - - 0.833 - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
51. cd248b ENSDARG00000077938 2561 1.593 - 0.849 - - - 0.744 - - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
52. nudt3a ENSDARG00000016256 2713 1.59 - 0.857 - - - - 0.733 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
53. snx27a ENSDARG00000033804 2249 1.589 0.821 - - - - - 0.768 - - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
54. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 1.586 0.823 0.763 - - - - - - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
55. mccc2 ENSDARG00000017571 5635 1.586 0.878 - - - - - 0.708 - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
56. wnk1b ENSDARG00000039392 3587 1.584 0.871 0.713 - - - - - - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
57. gstm gstm 4064 1.583 - 0.774 - - - - 0.809 - -
58. COL13A1 1565 1.581 0.830 0.751 - - - - - - - collagen, type XIII, alpha 1, transcript variant X1
59. eif2s1a ENSDARG00000005827 5992 1.579 0.800 0.779 - - - - - - - eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
60. zfand3 ENSDARG00000052833 2682 1.579 - - - - - - 0.737 0.842 - zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
61. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.577 0.781 0.796 - - - - - - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
62. hmbsa ENSDARG00000008840 2601 1.572 0.750 0.822 - - - - - - - hydroxymethylbilane synthase a [Source:ZFIN;Acc:ZDB-GENE-040426-1375]
63. prmt1 ENSDARG00000010246 11311 1.568 - 0.831 - - - 0.737 - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
64. hfe2 4113 1.565 - 0.837 - - - 0.728 - - - hemochromatosis type 2
65. atpaf2 ENSDARG00000056270, ENSDARG00000115757 658 1.56 - 0.797 - - - - 0.763 - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050411-18]
66. Sep-06 Sep-06 5465 1.557 0.803 0.754 - - - - - - -
67. SERBP1 SERBP1 9276 1.555 - 0.726 - - - - 0.829 - -
68. MRPS12_1 MRPS12_1 2714 1.552 0.789 0.763 - - - - - - -
69. alad ENSDARG00000100372 1711 1.551 0.806 0.745 - - - - - - - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
70. desi2 ENSDARG00000004460 1593 1.551 - 0.748 - - - - 0.803 - - desumoylating isopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-39]
71. drap1 ENSDARG00000041203 6749 1.55 - 0.844 - - - - - 0.706 - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
72. sec22a ENSDARG00000078328 1207 1.548 0.811 - - - - - 0.737 - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
73. TSSC4 ENSDARG00000036144 1994 1.54 0.780 - - - - 0.760 - - - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
74. rpf2 ENSDARG00000043960 2719 1.538 - 0.824 - - - - 0.714 - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
75. snrnp70 ENSDARG00000077126 5921 1.536 0.793 - - - - 0.743 - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
76. ttk ENSDARG00000041361 3911 1.536 - 0.741 - - - - 0.795 - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
77. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.535 - - - - - 0.780 - 0.755 - KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
78. pygmb ENSDARG00000013317 5454 1.531 - 0.805 - - - - 0.726 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
79. kmt2bb ENSDARG00000060697 5230 1.53 - 0.740 - - - 0.790 - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
80. foxo3b ENSDARG00000042904 5046 1.53 - - - - - 0.722 0.808 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
81. vbp1 ENSDARG00000030241 10619 1.529 - 0.827 - - - 0.702 - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
82. bcas2 ENSDARG00000043631 1971 1.526 - 0.757 - - - - - 0.769 - BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
83. myoz2b ENSDARG00000037266 2139 1.522 - 0.799 - - - 0.723 - - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
84. fus ENSDARG00000037968, ENSDARG00000113554, ENSDARG00000114284 4319 1.52 0.800 - - - - - - 0.720 - FUS RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1010]
85. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.519 - 0.808 - - - 0.711 - - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
86. arpp21 ENSDARG00000061081 892 1.518 - 0.781 - - - - 0.737 - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
87. abcf2a ENSDARG00000038785 2065 1.517 - 0.801 - - - - - 0.716 - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
88. h2afva ENSDARG00000068820 16427 1.515 - - - - - 0.772 0.743 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
89. chrac1 ENSDARG00000042337 2590 1.513 - - - 0.731 - 0.782 - - - chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
90. eif3g ENSDARG00000016889 10367 1.508 - - - - - 0.748 0.760 - - eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
91. si:ch211-22i13.2 ENSDARG00000043485 4719 1.507 0.790 0.717 - - - - - - - si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
92. znf865 ENSDARG00000036698 15532 1.503 - - - - - 0.755 0.748 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
93. zmiz1a ENSDARG00000074502 3920 1.502 - - - - - 0.737 0.765 - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
94. hif1an ENSDARG00000031915 2098 1.501 - - - - - 0.745 0.756 - - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
95. nkain1 ENSDARG00000006859 1961 1.501 - - - - - 0.765 0.736 - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
96. nmt1a ENSDARG00000052966 5918 1.501 0.752 0.749 - - - - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
97. nucks1a ENSDARG00000078473 28285 1.501 - 0.777 - - - 0.724 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
98. phrf1 ENSDARG00000075252 1982 1.496 0.793 0.703 - - - - - - - PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-624]
99. ARHGAP32 ARHGAP32 670 1.496 - 0.786 - - - - 0.710 - -
100. cct8 ENSDARG00000008243 6843 1.496 - 0.794 - - - 0.702 - - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]

There are 1571 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA