Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sf3b3

Gene Name Gene ID Reads Annotation
sf3b3 ENSDARG00000103553 57 splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]










Genes with expression patterns similar to sf3b3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sf3b3 ENSDARG00000103553 57 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
2. im:7160594 ENSDARG00000070957 1 1.881 - - - - 0.881 - 1.000 - - im:7160594 [Source:ZFIN;Acc:ZDB-GENE-080917-43]
3. si:dkey-240n22.2 si:dkey-240n22.2 2 1.881 - - - - 0.881 - 1.000 - -
4. si:ch211-262n1.5 12 1.881 - - - - 0.881 - 1.000 - - si:ch211-262n1.5
5. plscr3a ENSDARG00000093078 7 1.881 - - - - 0.881 - 1.000 - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
6. st6galnac5a ENSDARG00000039220 76 1.86 - - 0.911 - - - 0.949 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
7. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.804 - - - - 0.881 - 0.923 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
8. CU184872.1 CU184872.1 15 1.787 - - - - - - 1.000 - 0.787
9. cdk5r1a ENSDARG00000037916 46 1.776 - - - - - 0.776 1.000 - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
10. TENM2 ENSDARG00000037122 48 1.748 - - - - 0.748 - 1.000 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
11. si:dkey-193c22.1 ENSDARG00000093687 104 1.712 - - - - - 0.712 1.000 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
12. LMTK3 LMTK3 222 1.62 - - - - - - 0.884 0.736 -
13. si:dkeyp-117h8.2 ENSDARG00000011602 260 1.602 - - - - - 0.874 0.728 - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
14. csnk1e ENSDARG00000045150, ENSDARG00000112948 288 1.598 - - - - - 0.796 0.802 - - casein kinase 1, epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-7873]
15. ncam1b ENSDARG00000007220 233 1.582 - - - - - 0.812 0.770 - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
16. gria1a ENSDARG00000021352, ENSDARG00000111182, ENSDARG00000111756, ENSDARG00000112683 169 1.548 - - - - - 0.786 0.762 - - glutamate receptor, ionotropic, AMPA 1a [Source:ZFIN;Acc:ZDB-GENE-020125-1]
17. lhx5 ENSDARG00000057936 785 1.52 - - - - - - 0.798 0.722 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
18. bon bon 20 1.516 - - - 0.721 0.795 - - - -
19. rd3 ENSDARG00000031600 1085 1.484 - - - - - 0.759 0.725 - - retinal degeneration 3, GUCY2D regulator [Source:ZFIN;Acc:ZDB-GENE-040724-103]
20. ccdc103 ENSDARG00000053455 81 1.473 - - 0.717 0.756 - - - - - coiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
21. THEM6 ENSDARG00000103914 49 1.462 - - 0.701 - - 0.761 - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
22. ZFHX3 ENSDARG00000103057 7759 1.448 - - - - - - 0.718 0.730 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
23. unc93b1 ENSDARG00000069114 37 1.444 - - - - 0.735 0.709 - - - unc-93 homolog B1, TLR signaling regulator [Source:ZFIN;Acc:ZDB-GENE-130424-1]
24. SPOCK1 ENSDARG00000074644 794 1.415 - - - - - - 0.706 0.709 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
25. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.413 - - - - - - 0.709 0.704 - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
26. si:dkey-16p19.3 si:dkey-16p19.3 119 1 - - - - - - 1.000 - -
27. LRRC38 LRRC38 5 1 - - - - 1.000 - - - -
28. VSTM5 4 1 - - - - - - 1.000 - - V-set and transmembrane domain containing 5
29. zgc:153932 ENSDARG00000052779, ENSDARG00000113315 3 1 - - - - - - 1.000 - - zgc:153932 [Source:ZFIN;Acc:ZDB-GENE-070209-223]
30. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1 - - - - - - 1.000 - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
31. mgrn1a ENSDARG00000100072 263 1 - - - - - - 1.000 - - mahogunin, ring finger 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6192]
32. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 1 - - - - - - 1.000 - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
33. acbd7 ENSDARG00000094730 0 1 - - - - - - 1.000 - - acyl-CoA binding domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-050913-108]
34. CABZ01061146.1 CABZ01061146.1 28 1 - - - - - - 1.000 - -
35. mpp7b ENSDARG00000025168 0 1 - - - - - - 1.000 - - membrane protein, palmitoylated 7b (MAGUK p55 subfamily member 7) [Source:ZFIN;Acc:ZDB-GENE-141212-293]
36. styxl1 ENSDARG00000026338 29 1 - - - - - - 1.000 - - serine/threonine/tyrosine interacting-like 1 [Source:ZFIN;Acc:ZDB-GENE-040912-45]
37. erbb4a ENSDARG00000063207 55 1 - - - - - - 1.000 - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
38. si:ch73-91k6.1 18 1 - - - - - - 1.000 - - si:ch73-91k6.1
39. smtlb ENSDARG00000017251 7 1 - - - - - - 1.000 - - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
40. zgc:158463_1 ENSDARG00000089382 23 1 - - - - - - 1.000 - - zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
41. ntrk3b ENSDARG00000086214 1 1 - - - - - - 1.000 - - neurotrophic tyrosine kinase, receptor, type 3b [Source:ZFIN;Acc:ZDB-GENE-010126-4]
42. si:dkey-286f3.5 si:dkey-286f3.5 0 1 - - - - - - 1.000 - -
43. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 1 - - - - - - 1.000 - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
44. nmu ENSDARG00000043299 67 1 - - - - - - 1.000 - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
45. si:dkey-121n8.3 si:dkey-121n8.3 0 1 - - - - - - 1.000 - -
46. sstr3 ENSDARG00000014477 14 1 - - - - - - 1.000 - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
47. adcyap1a ENSDARG00000004015 67 1 - - - - - - 1.000 - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
48. pde8a ENSDARG00000087941 11 1 - - - - - - 1.000 - - phosphodiesterase 8A [Source:ZFIN;Acc:ZDB-GENE-070112-622]
49. pcdh1a6 ENSDARG00000097170 6 1 - - - - - - 1.000 - - protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
50. CT573248.1 ENSDARG00000074029 10 1 - - - - - - 1.000 - -
51. MAP6D1 ENSDARG00000079777 47 1 - - - - - - 1.000 - - MAP6 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-293]
52. NRG3 NRG3 22 1 - - - - - - 1.000 - -
53. si:dkey-154b15.1 ENSDARG00000057010 85 1 - - - - - - 1.000 - - si:dkey-154b15.1 [Source:ZFIN;Acc:ZDB-GENE-060503-52]
54. cldnd ENSDARG00000006580 17 1 - - - - - - 1.000 - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
55. 5S_rRNA_9 5S_rRNA_9 0 1 - - - - - - 1.000 - -
56. si:dkey-121b10.8 si:dkey-121b10.8 3 1 - - - - - - 1.000 - -
57. BX530409.1 BX530409.1 65 1 - - - - - - 1.000 - -
58. ccdc64 ccdc64 2 1 - - - - - - 1.000 - -
59. prdm14 ENSDARG00000045371 106 1 - - - - - - 1.000 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
60. CU694952.2 CU694952.2 3 1 - - - - - - 1.000 - -
61. brd2b ENSDARG00000046087 73 1 - - - - - - 1.000 - - bromodomain containing 2b [Source:ZFIN;Acc:ZDB-GENE-070220-1]
62. b3gntl1 ENSDARG00000043431 50 1 - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
63. sftpbb ENSDARG00000067566 13 1 - - - - - - 1.000 - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
64. slco4a1 ENSDARG00000075948 74 1 - - - - - - 1.000 - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
65. CRISP3 CRISP3 0 1 - - - - - - 1.000 - -
66. CR339051.1 CR339051.1 9 1 - - - - 1.000 - - - -
67. slc5a9 ENSDARG00000005518 16 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
68. slitrk3b ENSDARG00000074739 19 1 - - - - - - 1.000 - - SLIT and NTRK-like family, member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-352]
69. dnah7l dnah7l 2 1 - - - - - - 1.000 - -
70. PLCB1 2 1 - - - - - - 1.000 - - phospholipase C beta 1
71. ntng2a ENSDARG00000077367 43 1 - - - - - - 1.000 - - netrin g2a [Source:ZFIN;Acc:ZDB-GENE-081105-186]
72. KLF8 ENSDARG00000060661 219 1 - - - - - - 1.000 - - Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
73. zgc:100951 ENSDARG00000111442 24 1 - - - - - - 1.000 - - zgc:100951 [Source:ZFIN;Acc:ZDB-GENE-040801-141]
74. nlgn1 ENSDARG00000077710 72 1 - - - - - - 1.000 - - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
75. zgc:153845 62 1 - - - - - - 1.000 - - zgc:153845
76. si:dkey-154p10.3 ENSDARG00000068366 153 1 - - - - - - 1.000 - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
77. lrit2 ENSDARG00000030626 69 1 - - - - - - 1.000 - - leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-160]
78. cx52.9 ENSDARG00000086453 7 1 - - - - - - 1.000 - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
79. ndrg1b ENSDARG00000010420 116 1 - - - - - - 1.000 - - N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
80. si:dkey-233h12.4 si:dkey-233h12.4 2 1 - - - - - - 1.000 - -
81. entpd3 ENSDARG00000035309 263 1 - - - - - - 1.000 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
82. rassf4 ENSDARG00000012460 43 1 - - - - - - 1.000 - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
83. si:dkey-250k15.7 ENSDARG00000095048 1 1 - - - - - - 1.000 - - si:dkey-250k15.7 [Source:ZFIN;Acc:ZDB-GENE-100921-33]
84. prph2a ENSDARG00000038018 2 1 - - - - - - 1.000 - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
85. si:ch211-117m20.4 ENSDARG00000094286 7 1 - - - - - - 1.000 - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
86. skor1a ENSDARG00000069030 19 1 - - - - - - 1.000 - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
87. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - - - 1.000 - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
88. si:dkey-115f9.3 7 1 - - - - - - 1.000 - - si:dkey-115f9.3, transcript variant X2
89. arl11l arl11l 31 1 - - - - - - 1.000 - -
90. ppp1r37 ENSDARG00000078458 49 1 - - - - - - 1.000 - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
91. grm1a ENSDARG00000026796 9 1 - - - - - - 1.000 - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
92. dnm1a ENSDARG00000010042 43 1 - - - - - - 1.000 - - dynamin 1a [Source:ZFIN;Acc:ZDB-GENE-081104-27]
93. taok3b ENSDARG00000094052 36 1 - - - - - - 1.000 - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
94. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - - 1.000 - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
95. CHD6 ENSDARG00000017244 219 1 - - - - - - 1.000 - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
96. smpdl3a ENSDARG00000053119 1 1 - - - - - - 1.000 - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
97. BX248582.3 BX248582.3 3 1 - - - - - - 1.000 - -
98. SHANK1_1 SHANK1_1 0 1 - - - - - - 1.000 - -
99. nebl ENSDARG00000021200 40 1 - - - - - - 1.000 - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
100. si:ch211-214c7.4 ENSDARG00000069595 56 1 - - - - - - 1.000 - - si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]

There are 1100 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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