Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sf3b3

Gene Name Gene ID Reads Annotation
sf3b3 ENSDARG00000103553 57 splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]










Genes with expression patterns similar to sf3b3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sf3b3 ENSDARG00000103553 57 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
2. plscr3a ENSDARG00000093078 7 1.881 - - - - 0.881 - 1.000 - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
3. si:ch211-262n1.5 12 1.881 - - - - 0.881 - 1.000 - - si:ch211-262n1.5
4. si:dkey-240n22.2 si:dkey-240n22.2 2 1.881 - - - - 0.881 - 1.000 - -
5. im:7160594 ENSDARG00000070957 1 1.881 - - - - 0.881 - 1.000 - - im:7160594 [Source:ZFIN;Acc:ZDB-GENE-080917-43]
6. st6galnac5a ENSDARG00000039220 76 1.86 - - 0.911 - - - 0.949 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
7. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.804 - - - - 0.881 - 0.923 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
8. CU184872.1 CU184872.1 15 1.787 - - - - - - 1.000 - 0.787
9. cdk5r1a ENSDARG00000037916 46 1.776 - - - - - 0.776 1.000 - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
10. TENM2 ENSDARG00000037122 48 1.748 - - - - 0.748 - 1.000 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
11. si:dkey-193c22.1 ENSDARG00000093687 104 1.712 - - - - - 0.712 1.000 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
12. LMTK3 LMTK3 222 1.62 - - - - - - 0.884 0.736 -
13. si:dkeyp-117h8.2 ENSDARG00000011602 260 1.602 - - - - - 0.874 0.728 - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
14. csnk1e ENSDARG00000045150, ENSDARG00000112948 288 1.598 - - - - - 0.796 0.802 - - casein kinase 1, epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-7873]
15. ncam1b ENSDARG00000007220 233 1.582 - - - - - 0.812 0.770 - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
16. gria1a ENSDARG00000021352, ENSDARG00000111182, ENSDARG00000111756, ENSDARG00000112683 169 1.548 - - - - - 0.786 0.762 - - glutamate receptor, ionotropic, AMPA 1a [Source:ZFIN;Acc:ZDB-GENE-020125-1]
17. lhx5 ENSDARG00000057936 785 1.52 - - - - - - 0.798 0.722 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
18. bon bon 20 1.516 - - - 0.721 0.795 - - - -
19. rd3 ENSDARG00000031600 1085 1.484 - - - - - 0.759 0.725 - - retinal degeneration 3, GUCY2D regulator [Source:ZFIN;Acc:ZDB-GENE-040724-103]
20. ccdc103 ENSDARG00000053455 81 1.473 - - 0.717 0.756 - - - - - coiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
21. THEM6 ENSDARG00000103914 49 1.462 - - 0.701 - - 0.761 - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
22. ZFHX3 ENSDARG00000103057 7759 1.448 - - - - - - 0.718 0.730 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
23. unc93b1 ENSDARG00000069114 37 1.444 - - - - 0.735 0.709 - - - unc-93 homolog B1, TLR signaling regulator [Source:ZFIN;Acc:ZDB-GENE-130424-1]
24. SPOCK1 ENSDARG00000074644 794 1.415 - - - - - - 0.706 0.709 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
25. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.413 - - - - - - 0.709 0.704 - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
26. mtf2 ENSDARG00000005590 82 1 - - - - - - 1.000 - - metal response element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-060512-94]
27. rab11bb_1 ENSDARG00000090086 7 1 - - - - - - 1.000 - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
28. xkr8.1 ENSDARG00000004498 18 1 - - - - - - 1.000 - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
29. sstr3 ENSDARG00000014477 14 1 - - - - - - 1.000 - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
30. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 1 - - - - - - 1.000 - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
31. BX119910.12 BX119910.12 1 1 - - - - - - 1.000 - -
32. adcyap1a ENSDARG00000004015 67 1 - - - - - - 1.000 - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
33. zgc:153845 62 1 - - - - - - 1.000 - - zgc:153845
34. P4HTM ENSDARG00000075209 16 1 - - - - - - 1.000 - - prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) [Source:ZFIN;Acc:ZDB-GENE-110131-7]
35. kiaa0947l kiaa0947l 61 1 - - - - - - 1.000 - -
36. cldnd ENSDARG00000006580 17 1 - - - - - - 1.000 - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
37. si:ch211-214c7.4 ENSDARG00000069595 56 1 - - - - - - 1.000 - - si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]
38. pde8a ENSDARG00000087941 11 1 - - - - - - 1.000 - - phosphodiesterase 8A [Source:ZFIN;Acc:ZDB-GENE-070112-622]
39. LRRC38 LRRC38 5 1 - - - - 1.000 - - - -
40. fgf18b ENSDARG00000043962, ENSDARG00000112937 29 1 - - - - - - 1.000 - - fibroblast growth factor 18b [Source:ZFIN;Acc:ZDB-GENE-050221-4]
41. opcml ENSDARG00000013005 18 1 - - - - - - 1.000 - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
42. TENM3 ENSDARG00000005479 39 1 - - - - - - 1.000 - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
43. LPHN2_1 LPHN2_1 3 1 - - - - - - 1.000 - -
44. CYP46A1 CYP46A1 16 1 - - - - - - 1.000 - -
45. C10H5orf63 C10H5orf63 17 1 - - - - - - 1.000 - -
46. si:ch73-62b13.1 ENSDARG00000093269 11 1 - - - - - - 1.000 - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
47. si:dkey-15f23.2 si:dkey-15f23.2 2 1 - - - - - - 1.000 - -
48. slc5a9 ENSDARG00000005518 16 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
49. nmu ENSDARG00000043299 67 1 - - - - - - 1.000 - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
50. crabp1a ENSDARG00000045926 99 1 - - - - - - 1.000 - - cellular retinoic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-020320-3]
51. il13 ENSDARG00000077809 8 1 - - - - - - 1.000 - - interleukin 13 [Source:ZFIN;Acc:ZDB-GENE-100727-2]
52. SMARCA4 ENSDARG00000104339 48 1 - - - - - - 1.000 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
53. elmod1 ENSDARG00000062056, ENSDARG00000113222 10 1 - - - - - - 1.000 - - ELMO/CED-12 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070112-262]
54. dnah7l dnah7l 2 1 - - - - - - 1.000 - -
55. slc1a1 ENSDARG00000020212 104 1 - - - - - - 1.000 - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
56. CR392001.1 ENSDARG00000095478 15 1 - - - - - - 1.000 - -
57. NRG3 NRG3 22 1 - - - - - - 1.000 - -
58. fbxl3b ENSDARG00000021882 58 1 - - - - - - 1.000 - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
59. FDXACB1 ENSDARG00000095750 98 1 - - - - - - 1.000 - - ferredoxin-fold anticodon binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8403]
60. hdhd2 ENSDARG00000024728 5 1 - - - - - - 1.000 - - haloacid dehalogenase-like hydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-37]
61. vwc2 ENSDARG00000076495 22 1 - - - - - - 1.000 - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
62. zgc:174268 ENSDARG00000076807 250 1 - - - - - - 1.000 - - zgc:174268 [Source:ZFIN;Acc:ZDB-GENE-080219-18]
63. phf20a ENSDARG00000002750 90 1 - - - - - - 1.000 - - PHD finger protein 20, a [Source:ZFIN;Acc:ZDB-GENE-070912-270]
64. MAP6D1 ENSDARG00000079777 47 1 - - - - - - 1.000 - - MAP6 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-293]
65. olfm3a ENSDARG00000071493, ENSDARG00000110039 46 1 - - - - - - 1.000 - - olfactomedin 3a [Source:ZFIN;Acc:ZDB-GENE-080219-11]
66. SSBP2 ENSDARG00000099727 22 1 - - - - - - 1.000 - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
67. ush1g ush1g 0 1 - - - - - - 1.000 - -
68. pcdh1a6 ENSDARG00000097170 6 1 - - - - - - 1.000 - - protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
69. SLC47A1 ENSDARG00000046012 3 1 - - - - - - 1.000 - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
70. zgc:158463_1 ENSDARG00000089382 23 1 - - - - - - 1.000 - - zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
71. si:ch73-91k6.1 18 1 - - - - - - 1.000 - - si:ch73-91k6.1
72. mei4 ENSDARG00000043912 10 1 - - - - - - 1.000 - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
73. her3 ENSDARG00000076857 131 1 - - - - - - 1.000 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
74. RHOBTB1 ENSDARG00000079468 189 1 - - - - - - 1.000 - - Rho related BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-871]
75. si:ch211-198o12.4 ENSDARG00000068098 0 1 - - - - - - 1.000 - - si:ch211-198o12.4 [Source:ZFIN;Acc:ZDB-GENE-060503-300]
76. wsb2 ENSDARG00000058608 11 1 - - - - - - 1.000 - - WD repeat and SOCS box containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-26]
77. si:ch73-286h23.3 si:ch73-286h23.3 0 1 - - - - - - 1.000 - -
78. gckr ENSDARG00000086620 0 1 - - - - - - 1.000 - - glucokinase (hexokinase 4) regulator [Source:ZFIN;Acc:ZDB-GENE-110411-248]
79. wbp2nl ENSDARG00000044852 14 1 - - - - - - 1.000 - - WBP2 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-4012]
80. SACS ENSDARG00000091042 15 1 - - - - - - 1.000 - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
81. ENDOD1_7 ENDOD1_7 33 1 - - - - - - 1.000 - -
82. CA4_1 CA4_1 3 1 - - - - - - 1.000 - -
83. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - - - - - - 1.000 - -
84. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - - - 1.000 - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
85. si:ch211-117m20.4 ENSDARG00000094286 7 1 - - - - - - 1.000 - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
86. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1 - - - - - - 1.000 - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
87. acbd7 ENSDARG00000094730 0 1 - - - - - - 1.000 - - acyl-CoA binding domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-050913-108]
88. tbxas1 ENSDARG00000002249 55 1 - - - - - - 1.000 - - thromboxane A synthase 1 (platelet) [Source:ZFIN;Acc:ZDB-GENE-030131-8805]
89. si:ch73-366i20.25 si:ch73-366i20.25 6 1 - - - - - - 1.000 - -
90. hs3st4 ENSDARG00000052648 6 1 - - - - - - 1.000 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
91. taok3b ENSDARG00000094052 36 1 - - - - - - 1.000 - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
92. CABZ01066439.2 CABZ01066439.2 5 1 - - - - - - 1.000 - -
93. gas5 279 1 - - - - - - 1.000 - - growth arrest-specific 5, transcript variant X4
94. CLSPN_1 CLSPN_1 59 1 - - - - - - 1.000 - -
95. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 1 - - - - - - 1.000 - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
96. RNASEH2C_1 RNASEH2C_1 10 1 - - - - - - 1.000 - -
97. nebl ENSDARG00000021200 40 1 - - - - - - 1.000 - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
98. si:dkey-25i10.6 si:dkey-25i10.6 2 1 - - - - - - 1.000 - -
99. SNORD18_1 SNORD18_1 5 1 - - - - - - 1.000 - -
100. neto1 ENSDARG00000068483 13 1 - - - - - - 1.000 - - neuropilin (NRP) and tolloid (TLL)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070912-592]

There are 1100 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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