Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sf3b3

Gene Name Gene ID Reads Annotation
sf3b3 ENSDARG00000103553 57 splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]










Genes with expression patterns similar to sf3b3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sf3b3 ENSDARG00000103553 57 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
2. si:ch211-262n1.5 12 1.881 - - - - 0.881 - 1.000 - - si:ch211-262n1.5
3. im:7160594 ENSDARG00000070957 1 1.881 - - - - 0.881 - 1.000 - - im:7160594 [Source:ZFIN;Acc:ZDB-GENE-080917-43]
4. si:dkey-240n22.2 si:dkey-240n22.2 2 1.881 - - - - 0.881 - 1.000 - -
5. plscr3a ENSDARG00000093078 7 1.881 - - - - 0.881 - 1.000 - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
6. st6galnac5a ENSDARG00000039220 76 1.86 - - 0.911 - - - 0.949 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
7. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.804 - - - - 0.881 - 0.923 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
8. CU184872.1 CU184872.1 15 1.787 - - - - - - 1.000 - 0.787
9. cdk5r1a ENSDARG00000037916 46 1.776 - - - - - 0.776 1.000 - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
10. TENM2 ENSDARG00000037122 48 1.748 - - - - 0.748 - 1.000 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
11. si:dkey-193c22.1 ENSDARG00000093687 104 1.712 - - - - - 0.712 1.000 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
12. LMTK3 LMTK3 222 1.62 - - - - - - 0.884 0.736 -
13. si:dkeyp-117h8.2 ENSDARG00000011602 260 1.602 - - - - - 0.874 0.728 - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
14. csnk1e ENSDARG00000045150, ENSDARG00000112948 288 1.598 - - - - - 0.796 0.802 - - casein kinase 1, epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-7873]
15. ncam1b ENSDARG00000007220 233 1.582 - - - - - 0.812 0.770 - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
16. gria1a ENSDARG00000021352, ENSDARG00000111182, ENSDARG00000111756, ENSDARG00000112683 169 1.548 - - - - - 0.786 0.762 - - glutamate receptor, ionotropic, AMPA 1a [Source:ZFIN;Acc:ZDB-GENE-020125-1]
17. lhx5 ENSDARG00000057936 785 1.52 - - - - - - 0.798 0.722 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
18. bon bon 20 1.516 - - - 0.721 0.795 - - - -
19. rd3 ENSDARG00000031600 1085 1.484 - - - - - 0.759 0.725 - - retinal degeneration 3, GUCY2D regulator [Source:ZFIN;Acc:ZDB-GENE-040724-103]
20. ccdc103 ENSDARG00000053455 81 1.473 - - 0.717 0.756 - - - - - coiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
21. THEM6 ENSDARG00000103914 49 1.462 - - 0.701 - - 0.761 - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
22. ZFHX3 ENSDARG00000103057 7759 1.448 - - - - - - 0.718 0.730 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
23. unc93b1 ENSDARG00000069114 37 1.444 - - - - 0.735 0.709 - - - unc-93 homolog B1, TLR signaling regulator [Source:ZFIN;Acc:ZDB-GENE-130424-1]
24. SPOCK1 ENSDARG00000074644 794 1.415 - - - - - - 0.706 0.709 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
25. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.413 - - - - - - 0.709 0.704 - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
26. skor1a ENSDARG00000069030 19 1 - - - - - - 1.000 - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
27. cacna1aa ENSDARG00000037905 4 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
28. gas5 279 1 - - - - - - 1.000 - - growth arrest-specific 5, transcript variant X4
29. mei4 ENSDARG00000043912 10 1 - - - - - - 1.000 - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
30. si:ch211-267e7.22 si:ch211-267e7.22 34 1 - - - - - - 1.000 - -
31. CCNO 21 1 - - - - - - 1.000 - - cyclin O
32. GPR22_1 GPR22_1 28 1 - - - - - - 1.000 - -
33. si:ch73-286h23.3 si:ch73-286h23.3 0 1 - - - - - - 1.000 - -
34. BX530409.1 BX530409.1 65 1 - - - - - - 1.000 - -
35. MAP6D1 ENSDARG00000079777 47 1 - - - - - - 1.000 - - MAP6 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-293]
36. mgrn1a ENSDARG00000100072 263 1 - - - - - - 1.000 - - mahogunin, ring finger 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6192]
37. zgc:158463_1 ENSDARG00000089382 23 1 - - - - - - 1.000 - - zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
38. PRKD1 ENSDARG00000075949 15 1 - - - - - - 1.000 - - protein kinase D1 [Source:ZFIN;Acc:ZDB-GENE-080131-1]
39. KLF8 ENSDARG00000060661 219 1 - - - - - - 1.000 - - Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
40. hdhd2 ENSDARG00000024728 5 1 - - - - - - 1.000 - - haloacid dehalogenase-like hydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-37]
41. LRRC38 LRRC38 5 1 - - - - 1.000 - - - -
42. si:dkey-250k15.7 ENSDARG00000095048 1 1 - - - - - - 1.000 - - si:dkey-250k15.7 [Source:ZFIN;Acc:ZDB-GENE-100921-33]
43. nmu ENSDARG00000043299 67 1 - - - - - - 1.000 - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
44. il13 ENSDARG00000077809 8 1 - - - - - - 1.000 - - interleukin 13 [Source:ZFIN;Acc:ZDB-GENE-100727-2]
45. mpp7b ENSDARG00000025168 0 1 - - - - - - 1.000 - - membrane protein, palmitoylated 7b (MAGUK p55 subfamily member 7) [Source:ZFIN;Acc:ZDB-GENE-141212-293]
46. SNORD18_1 SNORD18_1 5 1 - - - - - - 1.000 - -
47. CR339051.1 CR339051.1 9 1 - - - - 1.000 - - - -
48. glcea ENSDARG00000005095 33 1 - - - - - - 1.000 - - glucuronic acid epimerase a [Source:ZFIN;Acc:ZDB-GENE-040630-9]
49. si:dkey-121n8.3 si:dkey-121n8.3 0 1 - - - - - - 1.000 - -
50. ftr14l ENSDARG00000078254 2 1 - - - - - - 1.000 - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
51. neto1 ENSDARG00000068483 13 1 - - - - - - 1.000 - - neuropilin (NRP) and tolloid (TLL)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070912-592]
52. nptx2b ENSDARG00000045164 5 1 - - - - - - 1.000 - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
53. grm1a ENSDARG00000026796 9 1 - - - - - - 1.000 - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
54. si:ch211-119d14.3 ENSDARG00000075332 12 1 - - - - - - 1.000 - - si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
55. asap3 ENSDARG00000021896 19 1 - - - - - - 1.000 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
56. atp8b2 ENSDARG00000099216 21 1 - - - - - - 1.000 - - ATPase phospholipid transporting 8B2 [Source:ZFIN;Acc:ZDB-GENE-030131-2474]
57. nebl ENSDARG00000021200 40 1 - - - - - - 1.000 - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
58. cldnd ENSDARG00000006580 17 1 - - - - - - 1.000 - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
59. si:dkey-211f1.2 si:dkey-211f1.2 11 1 - - - - - - 1.000 - -
60. BX936298.1 ENSDARG00000092607 2 1 - - - - - - 1.000 - -
61. si:dkey-286f3.5 si:dkey-286f3.5 0 1 - - - - - - 1.000 - -
62. CLSPN_1 CLSPN_1 59 1 - - - - - - 1.000 - -
63. PCDH10_1 PCDH10_1 57 1 - - - - - - 1.000 - -
64. il21 ENSDARG00000067847 2 1 - - - - - - 1.000 - - interleukin 21 [Source:ZFIN;Acc:ZDB-GENE-120510-4]
65. fbxl3b ENSDARG00000021882 58 1 - - - - - - 1.000 - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
66. CABZ01060813.1 CABZ01060813.1 12 1 - - - - - - 1.000 - -
67. pigf ENSDARG00000032780 7 1 - - - - - - 1.000 - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
68. LRIF1_1 LRIF1_1 228 1 - - - - - - 1.000 - -
69. sftpbb ENSDARG00000067566 13 1 - - - - - - 1.000 - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
70. CABZ01066439.2 CABZ01066439.2 5 1 - - - - - - 1.000 - -
71. C18H19orf47 C18H19orf47 44 1 - - - - - - 1.000 - -
72. FDXACB1 ENSDARG00000095750 98 1 - - - - - - 1.000 - - ferredoxin-fold anticodon binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8403]
73. erbb4a ENSDARG00000063207 55 1 - - - - - - 1.000 - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
74. P4HTM ENSDARG00000075209 16 1 - - - - - - 1.000 - - prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) [Source:ZFIN;Acc:ZDB-GENE-110131-7]
75. mtf2 ENSDARG00000005590 82 1 - - - - - - 1.000 - - metal response element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-060512-94]
76. tecrl2 tecrl2 11 1 - - - - - - 1.000 - -
77. ccdc64 ccdc64 2 1 - - - - - - 1.000 - -
78. fam163b ENSDARG00000073914 46 1 - - - - - - 1.000 - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
79. il7r ENSDARG00000078970 4 1 - - - - - - 1.000 - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
80. SACS ENSDARG00000091042 15 1 - - - - - - 1.000 - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
81. cx52.9 ENSDARG00000086453 7 1 - - - - - - 1.000 - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
82. olfm3a ENSDARG00000071493, ENSDARG00000110039 46 1 - - - - - - 1.000 - - olfactomedin 3a [Source:ZFIN;Acc:ZDB-GENE-080219-11]
83. si:ch211-263p13.7 ENSDARG00000077622 2 1 - - - - - - 1.000 - - si:ch211-263p13.7 [Source:ZFIN;Acc:ZDB-GENE-091204-336]
84. kirrel3a ENSDARG00000075806 36 1 - - - - - - 1.000 - - kirre like nephrin family adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-091117-44]
85. si:ch211-63o20.10 13 1 - - - - - - 1.000 - - si:ch211-63o20.10
86. mkks ENSDARG00000016139 70 1 - - - - - - 1.000 - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
87. DNAJC14 ENSDARG00000105398 20 1 - - - - - - 1.000 - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
88. NAV1_1 NAV1_1 35 1 - - - - - - 1.000 - -
89. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - - - - - - 1.000 - -
90. PLCB1 2 1 - - - - - - 1.000 - - phospholipase C beta 1
91. si:ch211-151h10.2 ENSDARG00000068250 14 1 - - - - - - 1.000 - - si:ch211-151h10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-29]
92. gckr ENSDARG00000086620 0 1 - - - - - - 1.000 - - glucokinase (hexokinase 4) regulator [Source:ZFIN;Acc:ZDB-GENE-110411-248]
93. si:ch211-222g23.5 si:ch211-222g23.5 0 1 - - - - - - 1.000 - -
94. grik4 ENSDARG00000026753 22 1 - - - - - - 1.000 - - glutamate receptor, ionotropic, kainate 4 [Source:ZFIN;Acc:ZDB-GENE-070821-5]
95. CT573248.1 ENSDARG00000074029 10 1 - - - - - - 1.000 - -
96. GPR153 ENSDARG00000087601 48 1 - - - - - - 1.000 - - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
97. slitrk3b ENSDARG00000074739 19 1 - - - - - - 1.000 - - SLIT and NTRK-like family, member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-352]
98. mir20b 0 1 - - - - - - 1.000 - - microRNA 20b
99. zgc:153845 62 1 - - - - - - 1.000 - - zgc:153845
100. nlgn1 ENSDARG00000077710 72 1 - - - - - - 1.000 - - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]

There are 1100 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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