Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sf3b2

Gene Name Gene ID Reads Annotation
sf3b2 ENSDARG00000018049 4675 splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]










Genes with expression patterns similar to sf3b2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sf3b2 ENSDARG00000018049 4675 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
2. nxf1 ENSDARG00000055076 3251 2.747 0.877 - 0.939 - 0.931 - - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
3. necap2 ENSDARG00000046002 4372 2.715 0.856 - 0.884 - - - - 0.975 - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
4. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 2.646 - - 0.917 - 0.816 - - 0.913 - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
5. pdlim5b ENSDARG00000027600 4252 2.484 0.869 0.771 - - 0.844 - - - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
6. neo1 neo1 4056 2.472 - - - - - 0.748 0.758 0.966 -
7. ube2e2 ENSDARG00000034670 5918 2.469 - 0.823 - - 0.803 - 0.843 - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
8. brd3b ENSDARG00000100129 6387 2.435 0.859 - - - 0.860 - 0.716 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
9. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 2.411 - - - - 0.931 0.710 0.770 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
10. myef2 ENSDARG00000059398 6050 2.391 0.852 - - - - 0.753 0.786 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
11. rbm8a ENSDARG00000016516 8789 2.374 - - - - 0.813 - 0.776 - 0.785 RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
12. golgb1 ENSDARG00000061951 2023 2.329 - - - - - 0.727 - 0.874 0.728 golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
13. cyc1 ENSDARG00000038075 16699 2.323 - 0.729 0.816 - - - - 0.778 - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
14. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 2.302 - - 0.816 - - 0.758 - 0.728 - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
15. larp4b ENSDARG00000062146 1601 1.904 - - - - 0.916 - - 0.988 - La ribonucleoprotein domain family, member 4B [Source:ZFIN;Acc:ZDB-GENE-061027-39]
16. ppp4ca ENSDARG00000070570 8395 1.898 - - - - 0.937 - - 0.961 - protein phosphatase 4, catalytic subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-4433]
17. arhgap12b ENSDARG00000026482, ENSDARG00000109973 1142 1.887 - - 0.919 - - - - 0.968 - Rho GTPase activating protein 12b [Source:ZFIN;Acc:ZDB-GENE-040426-1727]
18. nol9 ENSDARG00000077751 2471 1.873 - - 0.942 - 0.931 - - - - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
19. tmem50a ENSDARG00000015757 3244 1.859 - - - - 0.906 - - 0.953 - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
20. pon2 ENSDARG00000016856 1382 1.851 0.879 - - - - - - 0.972 - paraoxonase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7116]
21. ptgs1 ENSDARG00000052148 2443 1.849 0.953 - 0.896 - - - - - - prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
22. syncripl ENSDARG00000026723 3889 1.842 - - 0.898 - - - - 0.944 - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
23. med13b ENSDARG00000003910 1143 1.836 - - 0.920 - 0.916 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
24. rfc1 ENSDARG00000054799 1416 1.83 - - 0.903 - 0.927 - - - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
25. atxn7l3 ENSDARG00000029331 531 1.82 - - 0.907 - 0.913 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
26. zgc:113054 ENSDARG00000053483 1079 1.819 - - 0.903 - - - - 0.916 - zgc:113054 [Source:ZFIN;Acc:ZDB-GENE-050320-9]
27. ddx42 ENSDARG00000037928 1659 1.806 - - - - - 0.830 - 0.976 - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
28. srsf5b ENSDARG00000027734 6996 1.805 - - 0.907 - - 0.898 - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
29. ncapd2 ENSDARG00000005058 2819 1.796 - 0.810 - - - - - 0.986 - non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
30. naa15a ENSDARG00000003213 5889 1.796 0.862 - - - 0.934 - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
31. supt6h ENSDARG00000006524 3221 1.794 0.869 - - - 0.925 - - - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
32. rab5c ENSDARG00000026712 4733 1.789 - - 0.922 - 0.867 - - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
33. ddi2 ENSDARG00000006477 4190 1.781 0.843 - - - 0.938 - - - - DNA-damage inducible protein 2 [Source:ZFIN;Acc:ZDB-GENE-031030-15]
34. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.774 - - 0.866 - 0.908 - - - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
35. tmed4 ENSDARG00000024954 3476 1.768 - - 0.922 - - - - - 0.846 transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
36. CDIP1 ENSDARG00000076118 1294 1.766 0.882 - - - - - - 0.884 - cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
37. esrp1 ENSDARG00000011245 2097 1.76 - 0.807 - - - - - 0.953 - epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
38. cdk8 ENSDARG00000016496, ENSDARG00000110333 3087 1.751 - - - - - - - 0.968 0.783 cyclin-dependent kinase 8 [Source:ZFIN;Acc:ZDB-GENE-030903-2]
39. ppapdc1b ppapdc1b 2866 1.749 0.877 - 0.872 - - - - - -
40. si:ch211-218c6.8 ENSDARG00000092364 1270 1.742 - 0.824 - - - - - 0.918 - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
41. efnb3b ENSDARG00000042277 5823 1.738 - - 0.957 - - 0.781 - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
42. im:7136729 im:7136729 1625 1.735 - 0.827 0.908 - - - - - -
43. prr12a ENSDARG00000074229 1668 1.734 - 0.828 0.906 - - - - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
44. aqr ENSDARG00000016775 1581 1.732 - 0.815 0.917 - - - - - - aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
45. gtf2a1 ENSDARG00000011000 2026 1.732 0.881 - 0.851 - - - - - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
46. CABZ01081490.1 ENSDARG00000111653 11892 1.73 - - 0.828 - 0.902 - - - -
47. tmem167a ENSDARG00000035914 3319 1.73 - - - - - 0.827 - - 0.903 transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
48. st13 ENSDARG00000021973 7787 1.722 0.852 - - - - - - 0.870 - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
49. med28 ENSDARG00000037410, ENSDARG00000112591, ENSDARG00000113633, ENSDARG00000117136 629 1.722 - - - - - - 0.735 0.987 - mediator complex subunit 28 [Source:ZFIN;Acc:ZDB-GENE-041121-4]
50. polr2j ENSDARG00000035146 1493 1.72 - - 0.934 - - 0.786 - - - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
51. spag7 ENSDARG00000011555 3224 1.717 - 0.798 - - 0.919 - - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
52. spcs2 ENSDARG00000042823 10032 1.715 - - - - 0.935 - 0.780 - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
53. atp5j 4272 1.714 0.850 - - - - - - 0.864 - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
54. nme3 ENSDARG00000100990 3889 1.711 - - 0.935 - - - - - 0.776 NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
55. sdhc ENSDARG00000038608, ENSDARG00000110542, ENSDARG00000114672 8862 1.711 0.820 - 0.891 - - - - - - succinate dehydrogenase complex, subunit C, integral membrane protein [Source:ZFIN;Acc:ZDB-GENE-040801-26]
56. pno1 ENSDARG00000008502 4547 1.711 0.856 - - - 0.855 - - - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
57. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 1.709 - 0.798 - - 0.911 - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
58. apc ENSDARG00000058868 2605 1.705 - - - - 0.907 - 0.798 - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
59. elmod2 ENSDARG00000101669 3101 1.705 - - 0.931 - - 0.774 - - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
60. srp72 ENSDARG00000014139 5221 1.704 0.956 0.748 - - - - - - - signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
61. ivd ENSDARG00000042853, ENSDARG00000112920 1526 1.701 0.879 0.822 - - - - - - - isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
62. pcbp2 ENSDARG00000099039 4248 1.699 - - 0.917 - - 0.782 - - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
63. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 1.698 0.877 0.821 - - - - - - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
64. shda ENSDARG00000094243 929 1.696 - - - - - - 0.716 0.980 - Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
65. ankrd49 ENSDARG00000023508 631 1.692 - - - - - - 0.706 0.986 - ankyrin repeat domain 49 [Source:ZFIN;Acc:ZDB-GENE-050417-46]
66. FBXO33 ENSDARG00000075400 1164 1.688 - - - - 0.937 - - - 0.751 F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
67. atp2a3 ENSDARG00000060978 1408 1.687 - - - - - - - 0.979 0.708 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
68. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.682 - 0.784 0.898 - - - - - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
69. csnk1g2a ENSDARG00000005458 2917 1.675 - - - - 0.911 - 0.764 - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
70. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.675 - - 0.906 - - 0.769 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
71. ubtf ENSDARG00000035066 4070 1.674 - - 0.950 - - - 0.724 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
72. erlin1 ENSDARG00000021991 5664 1.666 - 0.808 0.858 - - - - - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
73. ephb4a ENSDARG00000100725 1749 1.665 - - - - 0.910 - - - 0.755 eph receptor B4a [Source:ZFIN;Acc:ZDB-GENE-990415-62]
74. meis2b ENSDARG00000077840 5166 1.664 - - 0.836 - 0.828 - - - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
75. WDFY3 ENSDARG00000078890 2092 1.66 - - 0.920 - - - - - 0.740 WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
76. mkl1b 1408 1.66 - - 0.890 - - - 0.770 - - megakaryoblastic leukemia (translocation) 1b, transcript variant X7
77. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 1.658 - - - - 0.927 - 0.731 - - GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
78. SLC12A6 SLC12A6 883 1.656 - - - - - - 0.785 - 0.871
79. klf11a ENSDARG00000030844 3972 1.653 - 0.758 - - - - - 0.895 - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
80. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 1.653 - 0.810 0.843 - - - - - - bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
81. paxip1 ENSDARG00000005606 1417 1.652 - - - - 0.937 - 0.715 - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
82. pkp3 pkp3 9767 1.652 0.901 - - - - - - 0.751 -
83. capn2b ENSDARG00000055592 5431 1.651 - 0.815 - - 0.836 - - - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
84. RSF1 RSF1 1242 1.647 - - 0.942 - - - 0.705 - -
85. hexim1 ENSDARG00000036482 4317 1.643 - - - - 0.934 - 0.709 - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
86. smo ENSDARG00000002952 6411 1.642 - - - - 0.929 - 0.713 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
87. ncalda ENSDARG00000070688 5069 1.636 - - 0.907 - - - 0.729 - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
88. rapgef2 ENSDARG00000005482 2586 1.636 - - - - - - 0.708 0.928 - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
89. znf598 ENSDARG00000014945 1838 1.635 - - 0.927 - - - 0.708 - - zinc finger protein 598 [Source:ZFIN;Acc:ZDB-GENE-060602-3]
90. pdhb ENSDARG00000021346 9088 1.632 - - - - 0.864 - - 0.768 - pyruvate dehydrogenase E1 beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2173]
91. znf644a ENSDARG00000101361 819 1.631 - - 0.911 - - - 0.720 - - zinc finger protein 644a [Source:ZFIN;Acc:ZDB-GENE-030131-6244]
92. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 1.63 - 0.741 - - 0.889 - - - - translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
93. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.625 - - - - 0.925 0.700 - - - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
94. MAPT MAPT 4680 1.624 - - - - 0.841 0.783 - - -
95. TCAIM ENSDARG00000079881 424 1.623 - - 0.905 - - 0.718 - - - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
96. ncoa2 ENSDARG00000017929 2520 1.621 - - 0.909 - - 0.712 - - - nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-010406-3]
97. pank1b ENSDARG00000010098 3202 1.618 - 0.808 - - 0.810 - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
98. fzr1 fzr1 2984 1.617 - - 0.916 - - 0.701 - - -
99. histh1l ENSDARG00000035519 12293 1.615 0.863 - - - - 0.752 - - - histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
100. sepw2a 8597 1.615 - - - - - 0.817 - - 0.798 selenoprotein W, 2a

There are 1638 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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