Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sf1

Gene Name Gene ID Reads Annotation
sf1 ENSDARG00000008188 5142 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]










Genes with expression patterns similar to sf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sf1 ENSDARG00000008188 5142 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
2. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 3.952 - - - 0.704 0.727 - 0.781 0.840 0.900 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
3. tgif1 ENSDARG00000059337 4020 3.787 0.715 - 0.701 0.809 - - - 0.733 0.829 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
4. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 3.336 - 0.876 - 0.714 0.931 - 0.815 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
5. bcl11ab ENSDARG00000063153 3032 3.233 - - - 0.753 - 0.859 0.783 - 0.838 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
6. MAP4K4 ENSDARG00000098670 4665 3.183 - - 0.705 - 0.935 0.735 - - 0.808 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
7. jarid2b ENSDARG00000062268 2206 3.181 - - 0.756 0.773 0.934 - - - 0.718 jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
8. IM:7163548 IM:7163548 6540 3.172 - - - 0.710 0.933 0.800 0.729 - -
9. CYTH2 ENSDARG00000028800 2349 3.131 - - - 0.706 - 0.857 - 0.806 0.762 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
10. khsrp ENSDARG00000026489 15738 3.117 - - - - - 0.871 0.737 0.769 0.740 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
11. tmpob ENSDARG00000022978 8121 3.107 - 0.751 0.715 - - - - 0.808 0.833 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
12. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 3.103 - - 0.725 - - 0.753 0.870 - 0.755 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
13. TNKS TNKS 2775 3.079 0.775 - - - - 0.750 0.772 - 0.782
14. usp7 ENSDARG00000073710 7017 3.068 - - 0.754 0.734 - - 0.808 - 0.772 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
15. pum1 ENSDARG00000099256 5017 3.058 - - - - - 0.794 0.722 0.812 0.730 pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
16. eif4h ENSDARG00000042252 6742 2.982 - 0.703 - - - 0.799 - 0.715 0.765 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
17. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 2.628 - - - - 0.941 - 0.867 - 0.820 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
18. pcif1 ENSDARG00000099084 2851 2.559 - - - - 0.967 0.872 - - 0.720 PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
19. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 2.503 - - - 0.771 0.964 - 0.768 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
20. seta ENSDARG00000031495 39977 2.489 - - - - 0.741 0.886 - 0.862 - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
21. arhgap11a ENSDARG00000100019 1642 2.488 - - - - 0.961 0.787 0.740 - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
22. lbr ENSDARG00000014013 4835 2.476 - - - 0.793 - - 0.861 - 0.822 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
23. znf346 ENSDARG00000060695 3942 2.473 - - - - 0.948 - 0.720 - 0.805 zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
24. eif4a3 ENSDARG00000102978 16162 2.467 - - - - 0.938 0.774 - 0.755 - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
25. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.444 - 0.772 - - 0.938 - - - 0.734 eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
26. tmpoa ENSDARG00000007315 3638 2.443 - - - 0.749 0.941 - 0.753 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
27. si:ch211-197h24.6 ENSDARG00000091631 1933 2.437 - - - - 0.957 0.749 - - 0.731 si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
28. ap2b1 ENSDARG00000035152 2912 2.433 - - - - - 0.899 0.700 0.834 - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
29. SNRPG ENSDARG00000099667 18697 2.426 - 0.782 - - - - 0.794 - 0.850 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
30. SERBP1 SERBP1 9276 2.419 - 0.769 - - 0.759 0.891 - - -
31. kdm6bb ENSDARG00000056929 4807 2.416 - - - - 0.951 0.705 - - 0.760 lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
32. elof1 ENSDARG00000099453 6176 2.411 - - - - - 0.762 0.767 0.882 - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
33. seh1l ENSDARG00000004280 2915 2.406 - - - - - - 0.826 0.836 0.744 SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
34. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 2.401 - - - - 0.962 0.700 - - 0.739 syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
35. prp19 prp19 4804 2.401 - 0.807 - - - - 0.840 0.754 -
36. nono ENSDARG00000020482, ENSDARG00000115783 12482 2.391 - - - - - 0.800 - 0.789 0.802 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
37. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 2.389 - - - 0.716 0.964 - - - 0.709 bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
38. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 2.38 - - - - - 0.837 - 0.790 0.753 D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
39. sarnp ENSDARG00000059357 4768 2.372 - 0.707 - - - 0.754 0.911 - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
40. zgc:158409 zgc:158409 21963 2.369 - 0.753 - - - 0.833 - 0.783 -
41. mad2l1 ENSDARG00000004713 3398 2.36 - - - - 0.863 0.712 - - 0.785 MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
42. aurkb ENSDARG00000037640 4874 2.358 - - - 0.795 - 0.792 0.771 - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
43. ncoa5 ENSDARG00000016345 5765 2.358 0.726 - - - - - 0.838 - 0.794 nuclear receptor coactivator 5 [Source:ZFIN;Acc:ZDB-GENE-040912-155]
44. GATAD2B ENSDARG00000005834 3855 2.343 - - - - - 0.720 0.757 - 0.866 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
45. kif22 ENSDARG00000102624 3694 2.337 - - - 0.709 - - 0.800 - 0.828 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
46. vangl2 ENSDARG00000027397 2418 2.322 - - - - - 0.759 0.863 - 0.700 VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
47. kif5aa ENSDARG00000098936 2428 2.319 - - - - - 0.746 - 0.837 0.736 kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
48. smc1al ENSDARG00000058203 8838 2.312 - - 0.779 - - - 0.740 - 0.793 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
49. polr2a ENSDARG00000099966 5706 2.311 - 0.710 - - - - 0.848 - 0.753 polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
50. arhgef2 ENSDARG00000075819 2173 2.307 - - - - - 0.754 0.703 - 0.850 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
51. tcea1 ENSDARG00000003531 2912 2.306 - - - 0.732 - 0.748 - - 0.826 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
52. arid1aa ENSDARG00000101710 3644 2.3 - - - 0.744 - 0.759 - - 0.797 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
53. kpnb1 ENSDARG00000104889 9282 2.3 - - - 0.743 - - - 0.802 0.755 karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
54. lypla2 ENSDARG00000053656 8971 2.298 - 0.710 - - - - 0.755 - 0.833 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
55. npm1b ENSDARG00000037675 5448 2.297 - - - 0.735 - 0.842 - - 0.720 nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
56. ssbp3b ENSDARG00000030155 7163 2.296 - 0.737 - - 0.762 0.797 - - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
57. sin3b ENSDARG00000062472 2025 2.294 0.788 - - - - - 0.765 - 0.741 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
58. hdac1 ENSDARG00000015427 19804 2.288 - - - - - 0.789 - 0.725 0.774 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
59. arpp19b ENSDARG00000039880 4823 2.281 0.808 - - - - - 0.713 - 0.760 cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
60. smg7 ENSDARG00000060767 2759 2.279 - - - 0.718 - - 0.819 - 0.742 SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
61. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 2.275 - - - - - 0.784 0.751 - 0.740 NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
62. ppp2r1a ppp2r1a 11291 2.267 - 0.701 - - - 0.747 0.819 - -
63. wu:fb30e12 wu:fb30e12 1254 2.265 - - 0.725 - - 0.812 - - 0.728
64. rhoaa ENSDARG00000026845 6900 2.262 0.742 - - - - 0.759 - - 0.761 ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
65. sipa1l2 ENSDARG00000061640 4545 2.26 - - - 0.778 - 0.759 - - 0.723 signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
66. whsc1l1 8544 2.259 - - - - - - 0.775 0.724 0.760 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
67. nin ENSDARG00000060298 1558 2.257 - - - - - 0.812 0.722 - 0.723 ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
68. ahctf1 ENSDARG00000077530 2315 2.256 - - - - - 0.708 0.807 - 0.741 AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
69. btg3 ENSDARG00000069065, ENSDARG00000115730 1632 2.253 - - - - - - 0.769 0.734 0.750 B-cell translocation gene 3 [Source:ZFIN;Acc:ZDB-GENE-031113-19]
70. phf10 ENSDARG00000070084 1210 2.245 0.709 - - - - 0.813 - 0.723 - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
71. atp6v0b ENSDARG00000031681 4611 2.239 - 0.703 - - 0.771 - - 0.765 - ATPase H+ transporting V0 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-443]
72. vezf1a ENSDARG00000008247 1449 2.233 - - - 0.705 - 0.743 - - 0.785 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
73. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 2.23 - - 0.721 - - 0.794 - 0.715 - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
74. arhgef7a ENSDARG00000006299, ENSDARG00000114088 1627 2.228 - - - 0.703 - 0.825 - - 0.700 Rho guanine nucleotide exchange factor (GEF) 7a [Source:ZFIN;Acc:ZDB-GENE-060322-11]
75. tmem127 ENSDARG00000030981 1389 2.225 - - - - - 0.720 0.740 0.765 - transmembrane protein 127 [Source:ZFIN;Acc:ZDB-GENE-050522-97]
76. HOMEZ HOMEZ 1824 2.204 - - - 0.711 - - 0.729 - 0.764
77. CR936437.1 CR936437.1 6465 2.203 - - 0.705 - - - - 0.715 0.783
78. Sep-06 Sep-06 5465 2.187 - 0.700 - - - - 0.768 - 0.719
79. psenen ENSDARG00000068698 2777 2.159 - - - - - 0.734 - 0.709 0.716 presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
80. sub1b ENSDARG00000007720, ENSDARG00000112010 2258 2.127 - 0.705 - - - 0.708 - - 0.714 SUB1 homolog, transcriptional regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-209]
81. CDCA4 ENSDARG00000042319 7918 1.837 - - - - 0.959 0.878 - - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
82. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.828 - - - - 0.962 - 0.866 - - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
83. rbm25 rbm25 3629 1.811 - - - - 0.958 - - - 0.853
84. palm1b ENSDARG00000007818 2128 1.8 - - - - - 0.888 - 0.912 - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
85. gpm6ab ENSDARG00000004621 5825 1.778 - - - - 0.946 - - - 0.832 glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
86. tra2a ENSDARG00000007863 4449 1.775 - - - - 0.956 0.819 - - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
87. top2a ENSDARG00000024488 4273 1.758 - - - - 0.961 - - - 0.797 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
88. nrarpb ENSDARG00000018958 6225 1.752 - - - - - - - 0.895 0.857 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
89. atp1b4 ENSDARG00000053262 1337 1.74 - - - - 0.954 0.786 - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
90. dctn3 ENSDARG00000041363 3351 1.733 - - - - 0.960 - - 0.773 - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
91. cbx5 ENSDARG00000061187 24026 1.728 - - - - 0.882 - 0.846 - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
92. tet3 ENSDARG00000062646 6672 1.724 - - - - - - 0.832 0.892 - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
93. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.723 - - - - 0.946 - 0.777 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
94. stmn1b ENSDARG00000033655 9491 1.716 - - - - 0.920 0.796 - - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
95. fam89a ENSDARG00000079979 4375 1.713 - - - - 0.956 - 0.757 - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
96. pdcd10b ENSDARG00000012591 3395 1.712 0.878 - - - - 0.834 - - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
97. RANBP3 RANBP3 2513 1.712 - - - - 0.968 - 0.744 - -
98. sf3b3_1 ENSDARG00000103553 1191 1.707 - - - - 0.959 0.748 - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
99. tmem198a ENSDARG00000042115 1694 1.706 - - - - 0.915 - - - 0.791 transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
100. spcs1 ENSDARG00000059298 5327 1.704 - - - - 0.954 - 0.750 - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]

There are 2587 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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