Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for setdb1a

Gene Name Gene ID Reads Annotation
setdb1a ENSDARG00000041243 1952 SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]










Genes with expression patterns similar to setdb1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. setdb1a ENSDARG00000041243 1952 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
2. ZBTB16 ZBTB16 3385 2.596 - 0.856 0.949 - - - - 0.791 -
3. lbr ENSDARG00000014013 4835 2.569 - - 0.918 - 0.725 - - 0.926 - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
4. rnf2 ENSDARG00000010381 3427 2.444 - - 0.963 - - - 0.762 - 0.719 ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
5. lgi1a ENSDARG00000020493 1218 1.837 0.844 - 0.993 - - - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
6. fkbp8 ENSDARG00000001734 1709 1.833 - - 0.976 - - - - 0.857 - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
7. inip ENSDARG00000028523 1925 1.826 - - 0.991 - - - - 0.835 - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
8. CR548630.1 CR548630.1 3301 1.824 - 0.854 0.970 - - - - - -
9. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 1.816 - - 0.985 - - - - 0.831 - peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
10. polb ENSDARG00000003749 2049 1.808 - - 0.978 - - - - 0.830 - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
11. ldb1a ENSDARG00000010137 3035 1.786 - 0.817 0.969 - - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
12. MRPL51 ENSDARG00000041340, ENSDARG00000113440 1544 1.779 - 0.798 0.981 - - - - - - mitochondrial ribosomal protein L51 [Source:ZFIN;Acc:ZDB-GENE-050320-40]
13. pcnp ENSDARG00000037713 2754 1.768 - 0.858 0.910 - - - - - - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
14. nop10 ENSDARG00000104227 2463 1.767 - - 0.908 - - - - 0.859 - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
15. wu:fb17g07 wu:fb17g07 10567 1.763 - - 0.950 - - - - 0.813 -
16. gspt1l ENSDARG00000098627 8381 1.758 - 0.803 0.955 - - - - - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
17. yy1b ENSDARG00000027978 2669 1.743 0.765 - 0.978 - - - - - - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
18. ywhae2 ENSDARG00000017014 5105 1.738 - 0.832 0.906 - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
19. si:ch211-114l13.11 si:ch211-114l13.11 4727 1.735 - - 0.982 - - - - 0.753 -
20. PGBD4_3 PGBD4_3 861 1.725 0.735 - 0.990 - - - - - -
21. NAIF1_1 NAIF1_1 1336 1.723 - 0.737 0.986 - - - - - -
22. eif3ja ENSDARG00000012603 6324 1.713 - - 0.952 - - - - 0.761 - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
23. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 1.701 - - 0.912 - - - - 0.789 - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
24. smg5 ENSDARG00000041481 1286 1.696 - - 0.990 - - - 0.706 - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
25. adam10a ENSDARG00000053468 9308 1.689 - 0.771 0.918 - - - - - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
26. lsm6 ENSDARG00000036995 4377 1.687 - 0.805 0.882 - - - - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
27. dtl ENSDARG00000023002 572 1.686 0.704 - 0.982 - - - - - - denticleless E3 ubiquitin protein ligase homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020419-34]
28. crebbpa ENSDARG00000104609 1739 1.679 - 0.748 0.931 - - - - - - CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
29. si:ch211-120p12.3 1079 1.673 - 0.811 - - - - - 0.862 - si:ch211-120p12.3, transcript variant X2
30. CORO1C CORO1C 5554 1.672 0.739 - 0.933 - - - - - -
31. snx1a ENSDARG00000071031 3975 1.67 - 0.782 - - - - - 0.888 - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
32. vdac1 ENSDARG00000045132 8051 1.655 - 0.830 0.825 - - - - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
33. cbx3a ENSDARG00000003860 4922 1.636 - - 0.858 - - - 0.778 - - chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
34. synpo2lb ENSDARG00000078696 2361 1.63 - 0.799 - - - - - 0.831 - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
35. TNPO2 ENSDARG00000042887 2290 1.628 - 0.852 - - - - - 0.776 - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
36. psmb7 ENSDARG00000037962 11542 1.626 - 0.771 0.855 - - - - - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
37. creb1a ENSDARG00000053586 5068 1.612 - - - - 0.738 - - 0.874 - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
38. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.61 0.752 - 0.858 - - - - - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
39. puf60a ENSDARG00000032175 5618 1.606 - - - - - - - 0.862 0.744 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
40. CABZ01084579.1 CABZ01084579.1 7181 1.604 - 0.816 0.788 - - - - - -
41. bcl7a ENSDARG00000052907, ENSDARG00000111533 962 1.577 - 0.834 - - - - - - 0.743 BCL tumor suppressor 7A [Source:ZFIN;Acc:ZDB-GENE-000607-16]
42. GID4 ENSDARG00000079482 1375 1.574 - 0.754 - - - - - 0.820 - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
43. PRKAB2 2489 1.574 0.714 0.860 - - - - - - - protein kinase, AMP-activated, beta 2 non-catalytic subunit
44. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.572 - 0.863 - - - - - - 0.709 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
45. rb1 ENSDARG00000006782 1445 1.572 0.743 0.829 - - - - - - - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
46. phip ENSDARG00000015970 1080 1.569 0.786 0.783 - - - - - - - pleckstrin homology domain interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-261]
47. nova2 ENSDARG00000017673 7685 1.565 - - 0.780 - - - - 0.785 - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
48. katnb1 ENSDARG00000005456, ENSDARG00000110223, ENSDARG00000116933 630 1.553 0.764 0.789 - - - - - - - katanin p80 (WD repeat containing) subunit B 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1954]
49. usp1 ENSDARG00000056414 1816 1.54 - 0.811 0.729 - - - - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
50. clic4 ENSDARG00000022995 6064 1.54 - 0.829 - 0.711 - - - - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
51. zgc:113054 ENSDARG00000053483 1079 1.535 - 0.741 - - - - - 0.794 - zgc:113054 [Source:ZFIN;Acc:ZDB-GENE-050320-9]
52. lfng ENSDARG00000037879 11783 1.534 0.774 - - - - - - 0.760 - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
53. COL4A3BP COL4A3BP 3288 1.532 - 0.815 0.717 - - - - - -
54. ylpm1 ENSDARG00000043680 7676 1.532 - 0.829 - - - - 0.703 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
55. top2b ENSDARG00000034195 3715 1.527 0.823 - - - 0.704 - - - - DNA topoisomerase II beta [Source:ZFIN;Acc:ZDB-GENE-041008-136]
56. ints8 ENSDARG00000057986 1063 1.52 - 0.792 - - - - 0.728 - - integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
57. slbp ENSDARG00000100558 3405 1.518 - 0.813 - - - - 0.705 - - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
58. tmpoa ENSDARG00000007315 3638 1.515 0.810 - - - - - 0.705 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
59. WNT7A WNT7A 320 1.509 - 0.803 - - - - 0.706 - -
60. mgst3 mgst3 3982 1.499 - 0.738 - - - - - 0.761 -
61. WAPAL WAPAL 1888 1.488 - 0.716 - - - - 0.772 - -
62. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.488 - 0.737 - - - - - 0.751 - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
63. klf13 ENSDARG00000061368 1151 1.473 - - 0.728 - - - 0.745 - - Kruppel-like factor 13 [Source:ZFIN;Acc:ZDB-GENE-060929-1274]
64. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.47 0.767 - - - - - 0.703 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
65. smg7 ENSDARG00000060767 2759 1.469 - - - - - - - 0.756 0.713 SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
66. AL844567.1 AL844567.1 1605 1.428 0.713 0.715 - - - - - - -
67. CLIP4 ENSDARG00000096961 363 0.993 - - 0.993 - - - - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
68. rhogc ENSDARG00000028401 2671 0.993 - - 0.993 - - - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
69. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 0.992 - - 0.992 - - - - - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
70. fut8 fut8 652 0.992 - - 0.992 - - - - - -
71. sema3fa ENSDARG00000011163 759 0.992 - - 0.992 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
72. pou6f1 ENSDARG00000011570 1501 0.992 - - 0.992 - - - - - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
73. cln6a ENSDARG00000077584 1090 0.991 - - 0.991 - - - - - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
74. U1_25 U1_25 283 0.991 - - 0.991 - - - - - -
75. wdhd1 ENSDARG00000015998 775 0.991 - - 0.991 - - - - - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
76. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 0.991 - - 0.991 - - - - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
77. dyrk1ab ENSDARG00000023814 1769 0.991 - - 0.991 - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
78. crb2a ENSDARG00000060106 1307 0.991 - - 0.991 - - - - - - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
79. lrp12 ENSDARG00000098845 999 0.991 - - 0.991 - - - - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
80. klhl15 ENSDARG00000001930 793 0.991 - - 0.991 - - - - - - kelch-like family member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-99]
81. SNX19 SNX19 350 0.991 - - 0.991 - - - - - -
82. gata1b ENSDARG00000059130 151 0.99 - - 0.990 - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
83. znf410 ENSDARG00000008218 1807 0.99 - - 0.990 - - - - - - zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
84. mfsd4a mfsd4a 179 0.99 - - 0.990 - - - - - -
85. zgc:171673 ENSDARG00000102473 256 0.99 - - 0.990 - - - - - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
86. phf12a ENSDARG00000074303 1025 0.99 - - 0.990 - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
87. pkib ENSDARG00000053110 527 0.99 - - 0.990 - - - - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
88. arid1b ENSDARG00000092503 1376 0.99 - - 0.990 - - - - - - AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
89. MED8 ENSDARG00000114425 459 0.99 - - 0.990 - - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
90. pld1b ENSDARG00000057125 325 0.99 - - 0.990 - - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
91. zgc:113227 ENSDARG00000058874 266 0.99 - - 0.990 - - - - - - zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
92. PATZ1 ENSDARG00000076584 1116 0.99 - - 0.990 - - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
93. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.99 - - 0.990 - - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
94. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 0.99 - - 0.990 - - - - - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
95. pnn ENSDARG00000015851 1269 0.99 - - 0.990 - - - - - - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
96. si:dkey-176f19.6 si:dkey-176f19.6 373 0.99 - - 0.990 - - - - - -
97. vipas39 ENSDARG00000103690 280 0.99 - - 0.990 - - - - - - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:ZFIN;Acc:ZDB-GENE-040520-1]
98. clybl ENSDARG00000029729 690 0.99 - - 0.990 - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
99. pycr1 pycr1 1258 0.99 - - 0.990 - - - - - -
100. smad4 smad4 2519 0.989 - - 0.989 - - - - - -

There are 1054 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA