Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for setd3

Gene Name Gene ID Reads Annotation
setd3 ENSDARG00000016513 1507 SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]










Genes with expression patterns similar to setd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. setd3 ENSDARG00000016513 1507 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
2. ITGB1BP2 ENSDARG00000030176 2472 2.478 - 0.818 - - - 0.859 0.801 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
3. ryr1b ENSDARG00000023797 5693 2.447 - 0.806 - 0.794 - - 0.847 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
4. cd248b ENSDARG00000077938 2561 2.418 - 0.848 - - - 0.774 0.796 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
5. myod1 ENSDARG00000030110 6019 2.413 - 0.791 - - - 0.798 0.824 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
6. chrna1 ENSDARG00000009021 2931 2.398 - 0.772 - - - 0.702 0.924 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
7. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.377 - 0.793 - 0.750 - - 0.834 - -
8. PHB2 PHB2 3755 2.346 - 0.831 - 0.740 - - 0.775 - -
9. CR392006.1 CR392006.1 1401 2.334 - 0.797 - 0.722 - - 0.815 - -
10. alg3 ENSDARG00000053155 1843 2.327 0.721 0.822 - - - - 0.784 - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
11. lrpprc ENSDARG00000043970 3847 2.292 - 0.764 - - - 0.768 0.760 - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
12. tomm34 ENSDARG00000001557 1874 2.283 - 0.706 - - - 0.771 0.806 - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
13. usp28 ENSDARG00000008880 1850 2.282 0.744 0.741 - - - - 0.797 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
14. mrps9 ENSDARG00000061505 1636 2.28 - 0.749 - - - 0.799 0.732 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
15. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 2.255 - 0.704 - - - 0.848 0.703 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
16. nid1a ENSDARG00000068710 3948 2.255 0.704 - - - - 0.709 0.842 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
17. tmem56a ENSDARG00000098451 776 2.255 - - - 0.747 - 0.737 0.771 - - transmembrane protein 56a [Source:ZFIN;Acc:ZDB-GENE-090402-1]
18. fat1 fat1 3934 2.193 0.712 0.718 - - - - 0.763 - -
19. ablim3 ENSDARG00000088168, ENSDARG00000112071, ENSDARG00000114074 573 2.175 - - - - - 0.717 0.749 - 0.709 actin binding LIM protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1122]
20. txlnbb ENSDARG00000076241 6396 1.759 - 0.894 - - - - 0.865 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
21. alpk3a ENSDARG00000078989 1992 1.758 - 0.868 - - - - 0.890 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
22. limch1a ENSDARG00000074275 2981 1.753 - 0.873 - - - - 0.880 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
23. myoz2b ENSDARG00000037266 2139 1.748 - 0.840 - - - - 0.908 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
24. ATP5J_2 ATP5J_2 2381 1.745 - 0.877 - - - - 0.868 - -
25. tnnc1b ENSDARG00000037539 13945 1.742 - 0.845 - - - - 0.897 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
26. vwde ENSDARG00000103443 5758 1.739 - 0.899 - - - - 0.840 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
27. serpinf1 ENSDARG00000069048 2083 1.737 - 0.856 - - - - 0.881 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
28. sptb ENSDARG00000030490 7128 1.734 - 0.869 - - - - 0.865 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
29. fitm1 ENSDARG00000056464 1759 1.728 - 0.836 - - - - 0.892 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
30. vbp1 ENSDARG00000030241 10619 1.725 - 0.879 - - - 0.846 - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
31. pbxip1a ENSDARG00000071015 4960 1.715 - 0.851 - - - - 0.864 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
32. sh3bgr ENSDARG00000021633 3498 1.713 - 0.836 - - - - 0.877 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
33. jph1a ENSDARG00000058603 2852 1.711 - 0.881 - - - - 0.830 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
34. PTPLA PTPLA 4044 1.701 - 0.830 - - - - 0.871 - -
35. chrnd ENSDARG00000019342 2728 1.7 - 0.848 - - - - 0.852 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
36. lin7a ENSDARG00000013414 1589 1.696 - - - - - 0.829 0.867 - - lin-7 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-1665]
37. TRIM63 TRIM63 1600 1.689 - 0.815 - - - - 0.874 - -
38. asb5b ENSDARG00000053222 1207 1.688 - 0.833 - - - - 0.855 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
39. ntmt1 ENSDARG00000022399 5779 1.684 - 0.824 - - - - 0.860 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
40. obsl1b ENSDARG00000077388 2511 1.678 - 0.853 - - - - 0.825 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
41. nudt3a ENSDARG00000016256 2713 1.677 - 0.913 - - - - 0.764 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
42. zgc:153662 zgc:153662 4604 1.676 - 0.812 - - - - 0.864 - -
43. nmrk2 ENSDARG00000067848 10293 1.676 - 0.771 - - - - 0.905 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
44. CU633479.5 ENSDARG00000114818 1815 1.675 - 0.799 - - - - 0.876 - -
45. srl ENSDARG00000104587 11126 1.674 - 0.823 - - - - 0.851 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
46. TENC1 TENC1 1729 1.673 - 0.813 - - - - 0.860 - -
47. TMPO TMPO 3264 1.672 - 0.823 - - - - 0.849 - -
48. grsf1 ENSDARG00000053021 2752 1.672 - - - - - 0.836 0.836 - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
49. C25H12orf73 C25H12orf73 2031 1.669 - 0.812 - - - - 0.857 - -
50. C13H10orf71 3489 1.668 - 0.778 - - - - 0.890 - - chromosome 13 C10orf71 homolog
51. klhl40a ENSDARG00000039052 2537 1.667 - 0.811 - - - - 0.856 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
52. mybphb ENSDARG00000003081 5208 1.666 - 0.796 - - - - 0.870 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
53. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.661 - 0.912 - - - - 0.749 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
54. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.66 - 0.829 - - - - 0.831 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
55. larp4aa ENSDARG00000078401 2526 1.656 - 0.870 - - - - 0.786 - - La ribonucleoprotein domain family, member 4Aa [Source:ZFIN;Acc:ZDB-GENE-090313-50]
56. srpk3 ENSDARG00000005916 1546 1.656 - 0.829 - - - - 0.827 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
57. gypc ENSDARG00000041546 1487 1.652 - 0.789 - - - - 0.863 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
58. zgc:66479 ENSDARG00000008732 3347 1.649 - 0.863 - - - - 0.786 - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
59. pygmb ENSDARG00000013317 5454 1.647 - 0.768 - - - - 0.879 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
60. trdn ENSDARG00000041779 4283 1.643 - 0.751 - - - - 0.892 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
61. dhrs7c dhrs7c 1173 1.643 - - - - - 0.772 0.871 - -
62. FHOD3_1 FHOD3_1 983 1.642 - 0.851 - - - - 0.791 - -
63. cacng1 cacng1 3118 1.641 - 0.799 - - - - 0.842 - -
64. dicer1 ENSDARG00000001129, ENSDARG00000109655 1811 1.64 - 0.834 - - - 0.806 - - - dicer 1, ribonuclease type III [Source:ZFIN;Acc:ZDB-GENE-030131-3445]
65. wdr3 ENSDARG00000011079 1403 1.638 - 0.860 - - - 0.778 - - - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
66. BX294434.1 ENSDARG00000061272 6493 1.634 - 0.743 - - - - 0.891 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
67. gars ENSDARG00000059070 17015 1.633 - - - - - 0.824 0.809 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
68. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.632 - 0.814 - - - - 0.818 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
69. myom1a ENSDARG00000061249 10230 1.63 - - - - - 0.750 0.880 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
70. CR450814.3 CR450814.3 608 1.63 - 0.765 - - - - 0.865 - -
71. mrps24 ENSDARG00000100116 1750 1.628 - 0.768 - - - - 0.860 - - mitochondrial ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-050522-393]
72. myhc4 ENSDARG00000035438 1322 1.628 - 0.806 - - - - 0.822 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
73. pygma ENSDARG00000055518 15972 1.628 - 0.814 - - - - 0.814 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
74. klhl21 ENSDARG00000039255 2550 1.627 - 0.760 - - - - 0.867 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
75. tgm1l1 ENSDARG00000102106 1437 1.625 - 0.796 - - - - 0.829 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
76. hapln1a ENSDARG00000089769 12334 1.625 - 0.734 - - - - 0.891 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
77. ryr3 ENSDARG00000071331 6795 1.624 - 0.737 - - - - 0.887 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
78. dyrk2 ENSDARG00000094646 2163 1.624 - 0.801 - - - - 0.823 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
79. ddx49 ENSDARG00000012899 1604 1.623 - 0.891 - - - - 0.732 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
80. CR792456.1 CR792456.1 783 1.623 - 0.786 - - - - 0.837 - -
81. txn2 ENSDARG00000034777 4071 1.623 - 0.803 - - - - 0.820 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
82. lpl ENSDARG00000087697 2578 1.62 - 0.828 - - - 0.792 - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
83. hspb11 ENSDARG00000002204 879 1.619 - 0.770 - - - - 0.849 - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
84. hhatla ENSDARG00000039051 6598 1.619 - 0.771 - - - - 0.848 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
85. igdcc4 ENSDARG00000076919 1303 1.618 - 0.845 - - - 0.773 - - - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
86. farsa ENSDARG00000098825 2813 1.618 - 0.886 - - - - 0.732 - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
87. tnnt2d ENSDARG00000002988 7590 1.617 - 0.741 - - - - 0.876 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
88. col11a1b ENSDARG00000009014 9998 1.617 - 0.830 - - - - 0.787 - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
89. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.616 - 0.749 - - - - 0.867 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
90. kbtbd12 ENSDARG00000001882 1196 1.616 - - - - - 0.766 0.850 - - kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
91. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.616 - 0.786 - - - 0.830 - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
92. cct8 ENSDARG00000008243 6843 1.61 - 0.750 - - - - 0.860 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
93. zgc:158296 ENSDARG00000070923 3935 1.61 - 0.755 - - - - 0.855 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
94. CR382298.3 CR382298.3 666 1.609 - - - - - 0.773 0.836 - -
95. ttc7b ENSDARG00000061207 710 1.606 - - - - - 0.768 0.838 - - tetratricopeptide repeat domain 7B [Source:ZFIN;Acc:ZDB-GENE-070105-3]
96. tgm2a ENSDARG00000070157 4516 1.606 - - - - - 0.791 0.815 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
97. eef2k ENSDARG00000035835 2906 1.604 - 0.779 - - - - 0.825 - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
98. tnw 16679 1.601 - 0.736 - - - - 0.865 - - tenascin W, transcript variant X2
99. arvcfb ENSDARG00000061688 2388 1.6 - 0.742 - - - - 0.858 - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
100. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 1.599 - - - - - 0.725 0.874 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]

There are 1777 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA