Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for serpine3

Gene Name Gene ID Reads Annotation
serpine3 ENSDARG00000057108 49 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]










Genes with expression patterns similar to serpine3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. serpine3 ENSDARG00000057108 49 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
2. pik3ap1 ENSDARG00000078285 23 2.817 - - - - - 1.000 0.860 - 0.957 phosphoinositide-3-kinase adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-250]
3. C7 C7 81 2.578 - - - - 0.964 - 0.708 - 0.906
4. cacnb2a ENSDARG00000099045 374 2.525 0.825 - - - 0.965 0.735 - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
5. RNF14 ENSDARG00000043905 41 2.365 0.825 - - - - 0.749 0.791 - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
6. mdm1 ENSDARG00000045675 64 1.983 - - - - 0.983 1.000 - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
7. CU694372.1 ENSDARG00000097988 105 1.969 - - - - 0.969 1.000 - - -
8. BX548000.1 ENSDARG00000099044 45 1.961 - - - - 0.961 1.000 - - -
9. zgc:113691 ENSDARG00000038898 36 1.955 - - 0.995 - 0.960 - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
10. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1.952 - - - - - 1.000 0.952 - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
11. nid2b ENSDARG00000009471 4 1.952 - - - - - 1.000 0.952 - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
12. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1.952 - - - - - 1.000 0.952 - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
13. ela2l ENSDARG00000056765, ENSDARG00000114256 31 1.922 - - - - 0.922 1.000 - - - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
14. bbs5 ENSDARG00000039827 211 1.921 - - - - - 1.000 0.921 - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
15. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 1.909 - - - - - - 0.964 - 0.945 ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
16. si:dkey-111b14.2 si:dkey-111b14.2 25 1.901 - - - - - 1.000 - 0.901 -
17. caspbl ENSDARG00000094433 1 1.901 - - - - - 1.000 - 0.901 - caspase b, like [Source:ZFIN;Acc:ZDB-GENE-090311-53]
18. klhl24 klhl24 40 1.899 - - - - - 1.000 - - 0.899
19. ZP2_2 ZP2_2 28 1.86 - - - - - 1.000 0.860 - -
20. si:dkey-228d14.8 si:dkey-228d14.8 3 1.853 - - - - - - 0.952 0.901 -
21. CR356223.4 CR356223.4 42 1.838 - - - - - 1.000 0.838 - -
22. si:ch211-255i3.4 ENSDARG00000095152 7 1.825 0.825 - - - - 1.000 - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
23. CABZ01069081.1 CABZ01069081.1 16 1.825 0.825 - - - - 1.000 - - -
24. zp2.5 ENSDARG00000086522 15 1.825 0.825 - - - - 1.000 - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
25. ptprc ENSDARG00000071437 104 1.823 - - 0.929 - - - - - 0.894 protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
26. rxfp1 ENSDARG00000090071 6 1.803 - - - - - 1.000 - 0.803 - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
27. pole2 ENSDARG00000100028 42 1.8 - - - - - 1.000 0.800 - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
28. bicc2 ENSDARG00000076557 77 1.788 - - 0.902 - - - - - 0.886 bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
29. st8sia1 ENSDARG00000098221 34 1.778 - - - - - 1.000 0.778 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
30. ovca2 ENSDARG00000103748 38 1.777 0.825 - - - - - 0.952 - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
31. ciita ENSDARG00000090851 5 1.777 0.825 - - - - - 0.952 - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
32. si:dkey-259p7.1 si:dkey-259p7.1 59 1.764 - - - - - 1.000 - 0.764 -
33. isg20l2 ENSDARG00000102266 167 1.764 - - - - - - 0.875 - 0.889 interferon stimulated exonuclease gene 20-like 2 [Source:ZFIN;Acc:ZDB-GENE-070928-8]
34. URB1 ENSDARG00000060308 78 1.763 0.825 - 0.938 - - - - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
35. CDC42EP1 CDC42EP1 50 1.762 - - - - - 0.822 0.940 - -
36. fermt3a fermt3a 56 1.759 0.825 - - - - - 0.934 - -
37. gng2 ENSDARG00000056831 81 1.758 - - - - - 1.000 - - 0.758 guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
38. ccdc103 ENSDARG00000053455 81 1.746 - - - - - - 0.790 - 0.956 coiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
39. SOX8 SOX8 22 1.74 0.825 - - - - - - - 0.915
40. FAM177A1 ENSDARG00000079636 19 1.739 0.825 - - - - - 0.914 - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
41. ANKRD13D ENSDARG00000098140 88 1.732 - - - - 0.961 0.771 - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
42. CR855996.2 ENSDARG00000104450 310 1.723 - - - - 0.841 - 0.882 - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
43. CR388095.2 ENSDARG00000117604 76 1.723 - - 0.849 - - - - - 0.874
44. si:dkey-176f19.7 ENSDARG00000103348 10 1.72 - - 0.989 0.731 - - - - - si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
45. CU459095.1 CU459095.1 7 1.703 - - - - - 1.000 - 0.703 -
46. si:dkey-78k11.4 ENSDARG00000094399 13 1.693 - - - 0.741 - - 0.952 - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]
47. CABZ01080492.1 CABZ01080492.1 495 1.685 0.825 - - - - - 0.860 - -
48. TTBK1_1 TTBK1_1 132 1.671 - - - - 0.968 - - - 0.703
49. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 1.666 0.825 - 0.841 - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
50. pparaa ENSDARG00000031777 216 1.662 0.829 - - - 0.833 - - - - peroxisome proliferator-activated receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-041210-169]
51. slc15a1b ENSDARG00000044528 6 1.661 - - - - - - 0.760 0.901 - solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
52. fam73b 76 1.651 - - 0.754 - - - - - 0.897 family with sequence similarity 73, member B
53. LRP3 ENSDARG00000008485 1401 1.644 - - - - 0.844 - - - 0.800 low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
54. CU466279.1 CU466279.1 84 1.633 - - 0.898 - - - 0.735 - -
55. si:ch211-13o20.1 si:ch211-13o20.1 30 1.628 0.825 - - - - - 0.803 - -
56. cpeb1a ENSDARG00000045932 81 1.625 0.743 - - - - - 0.882 - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
57. MSANTD2 ENSDARG00000079474 121 1.623 - - - - 0.762 - 0.861 - - Myb/SANT DNA binding domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26266]
58. rnf152 ENSDARG00000087782 141 1.623 - - 0.917 - - - 0.706 - - ring finger protein 152 [Source:ZFIN;Acc:ZDB-GENE-050327-84]
59. dnaaf1 ENSDARG00000012030 58 1.616 - - - - - 0.749 0.867 - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
60. bgnb ENSDARG00000002945, ENSDARG00000110495 76 1.615 - - 0.893 - - 0.722 - - - biglycan b [Source:ZFIN;Acc:ZDB-GENE-040426-21]
61. SCARNA13 SCARNA13 122 1.607 - - - - 0.836 0.771 - - -
62. ttll9 ENSDARG00000062806 89 1.602 - - 0.836 - - 0.766 - - - tubulin tyrosine ligase-like family, member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1582]
63. KLHL2 ENSDARG00000061786 204 1.599 - 0.732 - - - - 0.867 - - kelch-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-090312-193]
64. tmem245 ENSDARG00000070455 264 1.593 - - - - 0.783 - - - 0.810 transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
65. ighmbp2 ENSDARG00000069274, ENSDARG00000113605 60 1.59 0.787 - - - - - 0.803 - - immunoglobulin mu DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-258]
66. klf6b ENSDARG00000038561 27 1.589 0.825 - - - - - 0.764 - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
67. lrrc30 lrrc30 40 1.583 - - - - - 0.749 0.834 - -
68. cdc73 ENSDARG00000020201 22 1.575 0.825 0.750 - - - - - - - cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1309]
69. iqce ENSDARG00000089930 163 1.574 - - - - - 0.764 0.810 - - IQ motif containing E [Source:ZFIN;Acc:ZDB-GENE-090312-217]
70. ddx54 ENSDARG00000105286 183 1.573 - - 0.829 - - - 0.744 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:ZFIN;Acc:ZDB-GENE-021220-2]
71. scnm1 ENSDARG00000003027 256 1.573 - - 0.742 - - - - - 0.831 sodium channel modifier 1 [Source:ZFIN;Acc:ZDB-GENE-030131-415]
72. rsph9 ENSDARG00000017355 144 1.572 - 0.744 - - - - - - 0.828 radial spoke head 9 homolog [Source:ZFIN;Acc:ZDB-GENE-051120-129]
73. cbr4 ENSDARG00000009074 240 1.559 - - 0.752 - - - - - 0.807 carbonyl reductase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1796]
74. cept1b ENSDARG00000021177 675 1.559 - 0.765 - - - - 0.794 - - choline/ethanolamine phosphotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-071004-33]
75. tfr1a ENSDARG00000101322 105 1.553 - 0.722 - - 0.831 - - - - transferrin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-041220-1]
76. si:dkeyp-53d3.3 ENSDARG00000098664 65 1.553 - - - - - 0.708 - 0.845 - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
77. penka ENSDARG00000004869 161 1.55 - - - - 0.703 0.847 - - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
78. stk11ip ENSDARG00000070122, ENSDARG00000111986 199 1.533 - 0.756 0.777 - - - - - - serine/threonine kinase 11 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1022]
79. grasp ENSDARG00000000588, ENSDARG00000113330 766 1.524 - 0.797 - - - - 0.727 - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
80. si:dkeyp-53d3.6 204 1.521 - 0.712 - - - - 0.809 - - si:dkeyp-53d3.6, transcript variant X1
81. HIST1H4H HIST1H4H 26 1.516 - 0.745 - - - 0.771 - - -
82. ENSDARG00000090222 ENSDARG00000090222 402 1.511 - - - - 0.711 - - - 0.800
83. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.506 - 0.756 - - - 0.750 - - - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
84. CACNG4 CACNG4 123 1.505 - 0.795 - - 0.710 - - - -
85. hoxc11b ENSDARG00000102631 808 1.5 - - 0.738 - - - 0.762 - - homeobox C11b [Source:ZFIN;Acc:ZDB-GENE-000822-3]
86. CU683898.1 CU683898.1 203 1.5 - - - - - - 0.726 - 0.774
87. PIGB ENSDARG00000105011 277 1.499 - - - - 0.774 - - - 0.725 phosphatidylinositol glycan anchor biosynthesis, class B [Source:ZFIN;Acc:ZDB-GENE-040426-1216]
88. klf4b klf4b 533 1.488 0.723 0.765 - - - - - - -
89. fam184a ENSDARG00000014081 93 1.486 - - - - - 0.722 - - 0.764 family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
90. slc25a27 ENSDARG00000042873 297 1.469 - 0.761 - - - - - - 0.708 solute carrier family 25, member 27 [Source:ZFIN;Acc:ZDB-GENE-040426-1290]
91. KAT5 KAT5 623 1.459 - - - - - - 0.701 - 0.758
92. stap2b ENSDARG00000043281 174 1.444 0.703 - - 0.741 - - - - - signal transducing adaptor family member 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2540]
93. pld3 ENSDARG00000068199 205 1.43 0.706 0.724 - - - - - - - phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
94. polr3gla ENSDARG00000012044 148 1.423 - 0.704 - - - - 0.719 - - polymerase (RNA) III (DNA directed) polypeptide G like a [Source:ZFIN;Acc:ZDB-GENE-040912-67]
95. pla2g7 ENSDARG00000003584 365 1.418 - - 0.710 - - - - - 0.708 phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:ZFIN;Acc:ZDB-GENE-040426-2248]
96. C3H19orf66 C3H19orf66 20 1 - - - - - 1.000 - - -
97. grpr ENSDARG00000056620 66 1 - - - - - 1.000 - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
98. CU633740.2 CU633740.2 16 1 - - - - - 1.000 - - -
99. ZNF541 ENSDARG00000052188 0 1 - - - - - 1.000 - - - zinc finger protein 541 [Source:ZFIN;Acc:ZDB-GENE-060526-239]
100. phlpp2 ENSDARG00000090255 1 1 - - - - - 1.000 - - - PH domain and leucine rich repeat protein phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-070719-3]

There are 1934 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA