Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for senp3b

Gene Name Gene ID Reads Annotation
senp3b ENSDARG00000056741 1296 SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]










Genes with expression patterns similar to senp3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. senp3b ENSDARG00000056741 1296 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
2. gtf2a1 ENSDARG00000011000 2026 2.417 - - - - - 0.848 0.785 - 0.784 general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
3. kdm6bb ENSDARG00000056929 4807 2.301 - - - - - 0.728 0.791 0.782 - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
4. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 2.185 - 0.753 - - - - 0.732 0.700 - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
5. creb1a ENSDARG00000053586 5068 2.173 - 0.709 - - - 0.733 0.731 - - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
6. CABZ01078889.1 CABZ01078889.1 911 1.811 - 0.858 - - - - - - 0.953
7. gcnt4a ENSDARG00000035198, ENSDARG00000110336 661 1.805 - - - - 0.852 - - - 0.953 glucosaminyl (N-acetyl) transferase 4, core 2, a [Source:ZFIN;Acc:ZDB-GENE-030131-3231]
8. znf592 ENSDARG00000060885 776 1.78 - 0.836 - - - - - - 0.944 zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
9. wu:fb54a03 wu:fb54a03 1722 1.738 - - - - - - - 0.778 0.960
10. cdk11b ENSDARG00000102546 1579 1.734 - - - - - - 0.784 - 0.950 cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
11. ptbp2a ENSDARG00000101947 1921 1.732 - - - - - - 0.773 - 0.959 polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
12. creb3l2 ENSDARG00000063563 1284 1.722 - 0.840 - - - - - - 0.882 cAMP responsive element binding protein 3-like 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1542]
13. kbp kbp 701 1.715 - - - - 0.746 - - - 0.969
14. TRABD2A ENSDARG00000089701 401 1.711 - - - - 0.751 - - - 0.960 TraB domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-4053]
15. sin3aa ENSDARG00000079716 580 1.704 - - - - - 0.752 - - 0.952 SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
16. heca ENSDARG00000042877 200 1.688 - - - - 0.833 - 0.855 - - hdc homolog, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-041001-173]
17. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 1.684 - - - - - 0.723 - - 0.961 vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
18. cdipt ENSDARG00000070686 1318 1.682 - - - - 0.733 - - - 0.949 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
19. hspa4a ENSDARG00000004754 3439 1.681 0.738 - - - - - - - 0.943 heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
20. klf7a ENSDARG00000073857 1226 1.676 - - - - - 0.733 - - 0.943 Kruppel-like factor 7a [Source:ZFIN;Acc:ZDB-GENE-050522-276]
21. aacs ENSDARG00000012468 1138 1.674 - - - - - - 0.718 - 0.956 acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
22. zgc:174160 484 1.672 - - 0.704 - - - - - 0.968 zgc:174160, transcript variant X1
23. si:dkeyp-55f12.3 ENSDARG00000042345 1812 1.662 - - - - 0.731 - - - 0.931 si:dkeyp-55f12.3 [Source:ZFIN;Acc:ZDB-GENE-041001-118]
24. vps45 ENSDARG00000061180 791 1.658 - - - - - 0.705 - - 0.953 vacuolar protein sorting 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-526]
25. dlg1 ENSDARG00000009677 706 1.654 - - - - - 0.703 - - 0.951 discs, large homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010724-8]
26. mapk14a ENSDARG00000000857, ENSDARG00000112397 1743 1.648 - - - - - - 0.726 - 0.922 mitogen-activated protein kinase 14a [Source:ZFIN;Acc:ZDB-GENE-010202-2]
27. mcm10 ENSDARG00000045815 196 1.623 - 0.828 - - 0.795 - - - - minichromosome maintenance 10 replication initiation factor [Source:ZFIN;Acc:ZDB-GENE-041210-42]
28. ctbp2 ctbp2 3255 1.62 - - - - - 0.738 - - 0.882
29. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.611 - - - - - 0.727 - - 0.884 regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
30. GRAMD4 GRAMD4 1967 1.605 - - - - - - 0.810 - 0.795
31. SENP2 ENSDARG00000073837 1411 1.602 - - - - 0.870 - 0.732 - - SUMO specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060810-183]
32. lsm6 ENSDARG00000036995 4377 1.601 0.780 - - - - - - - 0.821 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
33. C25H7orf60 C25H7orf60 699 1.565 0.784 - - - - - 0.781 - -
34. eif2ak2 ENSDARG00000068729 184 1.562 - 0.723 - - 0.839 - - - - eukaryotic translation initiation factor 2-alpha kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080422-1]
35. smc1al ENSDARG00000058203 8838 1.561 - - - - - 0.838 0.723 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
36. echdc2 ENSDARG00000016607 719 1.547 - 0.795 - - 0.752 - - - - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
37. lrp12 ENSDARG00000098845 999 1.545 - - - - - - 0.743 - 0.802 low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
38. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.539 - 0.707 - - - - - - 0.832 transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
39. THOP1 ENSDARG00000013776 2717 1.536 - 0.748 - - - - - - 0.788 thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
40. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 1.533 0.801 - - - - - - - 0.732 histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
41. usp33 ENSDARG00000016163 651 1.533 - 0.787 - - - - 0.746 - - ubiquitin specific peptidase 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2323]
42. yes1 ENSDARG00000005941 3577 1.531 - - - - 0.780 - 0.751 - - YES proto-oncogene 1, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-050126-1]
43. CDH24 CDH24 325 1.529 - 0.814 - - - - 0.715 - -
44. clic4 ENSDARG00000022995 6064 1.528 - - - - - 0.703 - - 0.825 chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
45. grpel2 ENSDARG00000069421 5673 1.527 0.749 - - - - - - - 0.778 GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
46. cand1 ENSDARG00000017841 8164 1.522 - - - - - 0.756 0.766 - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
47. hug 4100 1.515 - - - - - 0.736 0.779 - - HuG, transcript variant X2
48. hcfc1b ENSDARG00000012519 3633 1.512 - 0.794 - - - 0.718 - - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
49. med25 ENSDARG00000038005, ENSDARG00000115713 1305 1.51 - 0.805 - - - 0.705 - - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
50. myo1b ENSDARG00000024694 1761 1.509 - - - - - 0.797 0.712 - - myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
51. calm1b ENSDARG00000034187 13158 1.508 0.761 - - - - - - - 0.747 calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
52. yy1a ENSDARG00000042796 4982 1.503 - 0.753 - - - - 0.750 - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
53. GK2 GK2 813 1.502 - 0.774 - - - - 0.728 - -
54. CYYR1 ENSDARG00000103783 4107 1.496 0.729 - - - - - - - 0.767 cysteine/tyrosine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2356]
55. cry-dash ENSDARG00000002396 312 1.487 0.752 - - - 0.735 - - - - cryptochrome DASH [Source:ZFIN;Acc:ZDB-GENE-040617-2]
56. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 1.476 0.719 - - - - 0.757 - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
57. SENP7 SENP7 1097 1.475 0.723 - - - - - 0.752 - -
58. vps35 ENSDARG00000008224 13245 1.475 - - - - - 0.766 - - 0.709 vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
59. kdm5c ENSDARG00000006124 4389 1.474 - - - - - 0.715 0.759 - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
60. auh ENSDARG00000042975 1841 1.474 - 0.758 - - 0.716 - - - - AU RNA binding protein/enoyl-CoA hydratase [Source:ZFIN;Acc:ZDB-GENE-040801-95]
61. nr2f1a ENSDARG00000052695 5037 1.471 0.755 - - - - 0.716 - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
62. hoxa9a ENSDARG00000105013 1509 1.464 - 0.762 - - - 0.702 - - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
63. CASK CASK 1750 1.46 - - - - - 0.720 0.740 - -
64. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.459 - - - - - 0.731 - - 0.728 thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
65. isoc1 ENSDARG00000060069 1621 1.458 - - - 0.709 - 0.749 - - - isochorismatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061020-1]
66. ints3 ENSDARG00000016811 339 1.453 - 0.710 - - - - 0.743 - - integrator complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060503-634]
67. paip2b ENSDARG00000008706 4255 1.449 - 0.724 - - - - 0.725 - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
68. zbtb18 ENSDARG00000028228 3653 1.447 - - - - - 0.707 - 0.740 - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
69. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.431 - 0.713 - - - - - - 0.718 aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
70. cnih cnih 8292 1.429 - 0.701 - - - 0.728 - - -
71. sema6a ENSDARG00000102165 1401 1.428 - - - - - 0.701 - 0.727 - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
72. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.417 - 0.713 - - - 0.704 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
73. asna1 ENSDARG00000018190 5253 1.413 - - - - - 0.711 0.702 - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
74. nfyba ENSDARG00000039185 1804 1.409 - - - 0.703 - 0.706 - - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
75. si:ch211-179l5.5 si:ch211-179l5.5 249 1.402 - 0.700 - - 0.702 - - - -
76. uck2b ENSDARG00000022213 1542 0.974 - - - - - - - - 0.974 uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
77. trim33 ENSDARG00000016181 1718 0.973 - - - - - - - - 0.973 tripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
78. rqcd1 2301 0.969 - - - - - - - - 0.969 RCD1 required for cell differentiation1 homolog (S. pombe)
79. BX571949.1 BX571949.1 293 0.969 - - - - - - - - 0.969
80. polr2j ENSDARG00000035146 1493 0.968 - - - - - - - - 0.968 polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
81. BX682552.2 BX682552.2 1427 0.968 - - - - - - - - 0.968
82. slc39a6 ENSDARG00000068143 1039 0.966 - - - - - - - - 0.966 solute carrier family 39 (zinc transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3023]
83. xpot ENSDARG00000099652 3026 0.965 - - - - - - - - 0.965 exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
84. adamts6 ENSDARG00000041982 320 0.965 - - - - - - - - 0.965 ADAM metallopeptidase with thrombospondin type 1 motif, 6 [Source:ZFIN;Acc:ZDB-GENE-091113-9]
85. sas sas 1783 0.965 - - - - - - - - 0.965
86. psmd12 ENSDARG00000052377 7763 0.964 - - - - - - - - 0.964 proteasome 26S subunit, non-ATPase 12 [Source:ZFIN;Acc:ZDB-GENE-030131-617]
87. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 0.964 - - - - - - - - 0.964 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
88. NAIF1 ENSDARG00000062753 696 0.963 - - - - - - - - 0.963 nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
89. CT030204.3 CT030204.3 486 0.963 - - - - - - - - 0.963
90. BCL2L12 BCL2L12 327 0.963 - - - - - - - - 0.963
91. TP53BP1 ENSDARG00000079000 997 0.963 - - - - - - - - 0.963 tumor protein p53 binding protein, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3695]
92. SRPK2 446 0.962 - - - - - - - - 0.962 SRSF protein kinase 2, transcript variant X4
93. cbx1b ENSDARG00000054442 1206 0.962 - - - - - - - - 0.962 chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
94. rfx2 ENSDARG00000013575 1275 0.962 - - - - - - - - 0.962 regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
95. olfml2a ENSDARG00000005648 1157 0.962 - - - - - - - - 0.962 olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
96. ube2t ENSDARG00000063285 716 0.962 - - - - - - - - 0.962 ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
97. xrn1 ENSDARG00000091652 2864 0.962 - - - - - - - - 0.962 5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]
98. cetn4 ENSDARG00000041215 898 0.962 - - - - - - - - 0.962 centrin 4 [Source:ZFIN;Acc:ZDB-GENE-030826-21]
99. gins1 ENSDARG00000007624 1421 0.962 - - - - - - - - 0.962 GINS complex subunit 1 (Psf1 homolog) [Source:ZFIN;Acc:ZDB-GENE-041010-184]
100. fam60a 825 0.961 - - - - - - - - 0.961 family with sequence similarity 60, member A

There are 1501 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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