Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sema6a

Gene Name Gene ID Reads Annotation
sema6a ENSDARG00000102165 1401 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]










Genes with expression patterns similar to sema6a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sema6a ENSDARG00000102165 1401 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
2. ek1 ENSDARG00000020080 742 3.344 - - 0.974 - - 0.741 0.921 - 0.708 eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
3. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 3.311 - - - - - 0.822 0.839 0.871 0.779 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
4. rtn1b ENSDARG00000021143 1682 3.168 - - - - - 0.860 0.793 0.754 0.761 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
5. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.117 - - - - - 0.766 0.803 0.716 0.832 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
6. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.582 - - 0.928 - - 0.889 0.765 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
7. dnajc5aa ENSDARG00000042948 2885 2.539 - - 0.944 - - 0.765 0.830 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
8. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.526 - - 0.870 - - 0.825 - - 0.831 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
9. stxbp1a ENSDARG00000001994 5154 2.508 - - 0.938 - - 0.843 0.727 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
10. zswim5 ENSDARG00000055900 4243 2.506 - - 0.848 - - 0.836 - - 0.822 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
11. RSF1_2 RSF1_2 1343 2.5 - - 0.957 - - - 0.789 - 0.754
12. fzd3a ENSDARG00000021664 1958 2.485 - - - - - 0.865 0.804 - 0.816 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
13. ncana 1537 2.479 - - - 0.802 - 0.813 0.864 - - neurocan a
14. rexo1 ENSDARG00000026986 770 2.467 - - 0.981 - - - 0.722 - 0.764 REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
15. gpm6bb ENSDARG00000001676 2005 2.466 - - 0.866 - - 0.765 - - 0.835 glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
16. celf3a ENSDARG00000034668 2432 2.458 - - - - - 0.814 0.780 - 0.864 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
17. dpysl5a ENSDARG00000011141 1827 2.457 - - - - - 0.843 0.779 - 0.835 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
18. ndrg4 ENSDARG00000103937 1234 2.454 - - - - - 0.811 0.732 - 0.911 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
19. tuba1c ENSDARG00000055216 8384 2.445 - - - - - 0.845 0.755 - 0.845 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
20. msl2a ENSDARG00000038909 1357 2.426 - - - - - 0.844 0.791 - 0.791 male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
21. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 2.421 - - - - - 0.889 0.789 - 0.743 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
22. rbm25 rbm25 3629 2.42 - - 0.916 - - 0.777 - - 0.727
23. nr2f1a ENSDARG00000052695 5037 2.42 - - 0.855 - - 0.837 - - 0.728 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
24. nrarpb ENSDARG00000018958 6225 2.392 - - - - - 0.855 0.812 - 0.725 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
25. st18 663 2.39 - - - - - 0.837 0.774 - 0.779 suppression of tumorigenicity 18, zinc finger
26. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 2.388 - - - - - 0.792 0.862 - 0.734 zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
27. gap43 ENSDARG00000099744 4114 2.387 - - - - - 0.851 0.774 - 0.762 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
28. hnrnpub ENSDARG00000004735 16496 2.386 - - - - - 0.760 0.791 - 0.835 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
29. nes ENSDARG00000088805 2710 2.382 - - 0.873 - - 0.726 0.783 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
30. ptbp2b ENSDARG00000015901 2458 2.381 - - - - - 0.742 0.866 - 0.773 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
31. tox ENSDARG00000032317 9126 2.38 - - - - - 0.732 0.799 - 0.849 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
32. fam60al 2846 2.377 - - - - - 0.782 0.806 - 0.789 family with sequence similarity 60, member A, like
33. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 2.374 - 0.775 - - - 0.837 0.762 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
34. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.373 - - 0.837 - - - 0.743 - 0.793 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
35. nkain1 ENSDARG00000006859 1961 2.373 - - - - - 0.744 0.906 - 0.723 sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
36. stap2a ENSDARG00000092810 591 2.371 - - - - - 0.739 0.851 - 0.781 signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
37. Sep-03 Sep-03 1124 2.363 - - - - - 0.846 0.713 - 0.804
38. hmgb3a ENSDARG00000056725 15668 2.361 - - - - - 0.812 0.788 - 0.761 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
39. nbeaa ENSDARG00000070080 862 2.36 - - - - - 0.730 0.793 - 0.837 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
40. marcksa ENSDARG00000004049 2518 2.354 - - - - - 0.760 0.779 - 0.815 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
41. tmsb ENSDARG00000054911 6411 2.351 - 0.728 - - - 0.839 0.784 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
42. mllt11 ENSDARG00000071026 2518 2.346 - - - - - 0.838 0.734 - 0.774 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
43. hmp19 2554 2.344 - - - - - 0.867 0.776 - 0.701 HMP19 protein
44. CYTH2 ENSDARG00000028800 2349 2.344 - - - - - 0.794 0.799 - 0.751 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
45. tmpob ENSDARG00000022978 8121 2.337 - - - - - 0.764 0.792 - 0.781 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
46. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.337 - - - 0.707 - 0.849 0.781 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
47. snrpd3l ENSDARG00000076283 7655 2.337 - - - - - 0.742 0.775 - 0.820 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
48. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 2.336 - 0.843 - - - 0.786 - - 0.707 nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
49. nova2 ENSDARG00000017673 7685 2.335 - - - - - 0.796 0.823 - 0.716 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
50. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.333 - - - - - 0.827 0.744 0.762 - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
51. ablim1a ENSDARG00000060149 228 2.333 - - - - - 0.712 - 0.894 0.727 actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
52. nin ENSDARG00000060298 1558 2.331 - 0.714 - - - - - 0.896 0.721 ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
53. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.323 - - - - - 0.762 0.830 - 0.731 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
54. fez1 ENSDARG00000023174 701 2.32 - - - - - 0.802 0.754 - 0.764 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
55. adarb1a ENSDARG00000041609 476 2.318 - - - - - 0.748 0.799 0.771 - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
56. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 2.315 - - - - - 0.769 0.797 - 0.749 zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
57. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.312 - - - - - 0.842 0.733 - 0.737 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
58. nmnat2 ENSDARG00000004580 370 2.311 - - - - - 0.781 0.772 0.758 - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
59. SPOCK1 ENSDARG00000074644 794 2.311 - - - - - 0.767 0.776 - 0.768 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
60. lppr3a lppr3a 1294 2.309 - - - - - 0.799 - 0.775 0.735
61. lgi1a ENSDARG00000020493 1218 2.299 - - - - - 0.737 0.754 0.808 - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
62. CR847998.1 ENSDARG00000104784 518 2.291 - - - - - 0.790 0.732 0.769 -
63. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.29 - 0.754 - - - 0.792 0.744 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
64. dpysl3 ENSDARG00000002587 4381 2.289 - - - - - 0.778 0.745 - 0.766 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
65. si:ch211-202e12.3 401 2.284 - - - - - 0.784 0.744 - 0.756 si:ch211-202e12.3, transcript variant X6
66. rap2ip rap2ip 681 2.284 - - - - - 0.807 0.746 - 0.731
67. wfikkn2a ENSDARG00000013460 859 2.282 - - - - - 0.759 0.702 - 0.821 info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
68. coe2 coe2 1633 2.278 - - - - - 0.810 0.722 - 0.746
69. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.273 - - - - - 0.778 0.712 - 0.783 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
70. vezf1a ENSDARG00000008247 1449 2.268 - - - - - 0.763 0.764 - 0.741 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
71. tuba2 ENSDARG00000045014 1490 2.268 - - - - - 0.794 0.724 - 0.750 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
72. LINGO2 LINGO2 300 2.267 - - - - - 0.727 0.784 0.756 -
73. nadl1.1 1200 2.267 - - - - - 0.808 0.728 - 0.731 neural adhesion molecule L1.1, transcript variant X1
74. negr1 ENSDARG00000021607 1051 2.258 - - - - - 0.712 0.795 - 0.751 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
75. sept5a ENSDARG00000013843 1206 2.256 - - - - - 0.732 0.721 0.803 - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
76. pcsk1 ENSDARG00000002600 404 2.252 - - - - - 0.795 0.722 0.735 - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
77. gsx1 ENSDARG00000035735 1243 2.241 - - - - - 0.743 0.784 - 0.714 GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
78. lypla2 ENSDARG00000053656 8971 2.237 - - 0.821 - - 0.709 - - 0.707 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
79. lphn3.1 lphn3.1 756 2.195 - - - - - 0.733 0.731 - 0.731
80. prr18 ENSDARG00000093768 409 1.78 - - 0.980 - - - 0.800 - - proline rich 18 [Source:ZFIN;Acc:ZDB-GENE-081107-6]
81. eya3 ENSDARG00000036100 1965 1.775 - - 0.963 - - - - 0.812 - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
82. EEF1E1 ENSDARG00000071774 3806 1.769 - 0.817 0.952 - - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
83. TUBB8P7_1 TUBB8P7_1 2722 1.768 - - 0.930 - - 0.838 - - -
84. hes6 ENSDARG00000019335 4754 1.763 - - 0.933 - - 0.830 - - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
85. fam203a fam203a 570 1.761 - 0.782 0.979 - - - - - -
86. fmnl2b ENSDARG00000075041 1744 1.753 - - 0.957 - - - - - 0.796 formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
87. slc1a3a ENSDARG00000104431 9888 1.75 - - - - - 0.887 0.863 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
88. HDX ENSDARG00000079382 513 1.743 - - 0.981 - - - 0.762 - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
89. TUSC3 ENSDARG00000078854 1021 1.739 - - 0.977 - - - 0.762 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
90. hnrnpr ENSDARG00000014569 3423 1.733 - - 0.927 - - - 0.806 - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
91. CT990561.1 ENSDARG00000058284 566 1.73 - - 0.947 - - 0.783 - - - EPH receptor A5 [Source:NCBI gene;Acc:797595]
92. notch1a ENSDARG00000103554 498 1.73 - - 0.976 - - - 0.754 - - notch 1a [Source:ZFIN;Acc:ZDB-GENE-990415-173]
93. clstn1 ENSDARG00000031720 5286 1.723 - - 0.914 - - - 0.809 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
94. dnajc5ab ENSDARG00000004836 2923 1.722 - - 0.976 - - - - 0.746 - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
95. zbtb18 ENSDARG00000028228 3653 1.72 - - - - - 0.868 - - 0.852 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
96. wdr46_1 ENSDARG00000095879 1291 1.719 - 0.759 0.960 - - - - - - WD repeat domain 46 [Source:ZFIN;Acc:ZDB-GENE-040426-1264]
97. hoxb2a ENSDARG00000000175 1122 1.714 - - 0.957 - - 0.757 - - - homeobox B2a [Source:ZFIN;Acc:ZDB-GENE-990415-103]
98. safb ENSDARG00000020467 5608 1.709 - - 0.935 - - - - - 0.774 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
99. yaf2 ENSDARG00000015966 1905 1.708 - - 0.974 - - 0.734 - - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
100. rnd1l rnd1l 984 1.706 - - 0.964 - - 0.742 - - -

There are 2200 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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