Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sema5a

Gene Name Gene ID Reads Annotation
sema5a ENSDARG00000058821 333 sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8969]










Genes with expression patterns similar to sema5a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sema5a ENSDARG00000058821 333 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8969]
2. lhfp 700 2.499 0.794 0.968 - - - 0.737 - - - lipoma HMGIC fusion partner
3. nucb1 ENSDARG00000054833 2009 2.469 - 0.871 - 0.790 - - 0.808 - - nucleobindin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-222]
4. wbscr16 wbscr16 791 2.466 - 0.875 - - - - 0.782 0.809 -
5. fkbp10a ENSDARG00000099183 314 2.363 - - - 0.860 - 0.705 0.798 - - FK506 binding protein 10a [Source:ZFIN;Acc:ZDB-GENE-100921-75]
6. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1.906 0.925 0.981 - - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
7. CR759791.1 ENSDARG00000088591 160 1.895 0.913 0.982 - - - - - - - beta-1,3-galactosyltransferase 2-like [Source:NCBI gene;Acc:100537407]
8. bcl7ba ENSDARG00000111877 3696 1.827 - 0.947 - - - - 0.880 - - BCL tumor suppressor 7Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2193]
9. itgb1b.2 ENSDARG00000022689 523 1.821 - 0.965 - 0.856 - - - - - integrin, beta 1b.2 [Source:ZFIN;Acc:ZDB-GENE-040426-2598]
10. s1pr5b ENSDARG00000052192 52 1.802 0.925 - - - - - 0.877 - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
11. azi1_1 azi1_1 1375 1.783 - 0.983 - 0.800 - - - - -
12. matk ENSDARG00000074670 225 1.783 - 0.969 - 0.814 - - - - - megakaryocyte-associated tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070705-183]
13. si:dkey-228i19.34 si:dkey-228i19.34 43 1.779 0.925 - - - - - 0.854 - -
14. fam69c ENSDARG00000105040 295 1.772 - 0.981 - - - 0.791 - - - family with sequence similarity 69, member C [Source:ZFIN;Acc:ZDB-GENE-030131-8001]
15. asmtl ENSDARG00000021433, ENSDARG00000114151 550 1.744 0.763 0.981 - - - - - - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
16. rab34b ENSDARG00000010977 590 1.743 - 0.977 - 0.766 - - - - - RAB34, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-091118-61]
17. pik3r4 ENSDARG00000060469 381 1.74 0.798 0.942 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050309-84]
18. crcp ENSDARG00000069373 730 1.724 - 0.979 - - - - 0.745 - - calcitonin gene-related peptide-receptor component protein [Source:ZFIN;Acc:ZDB-GENE-060825-150]
19. cdyl ENSDARG00000038985 441 1.721 - 0.951 - - - - 0.770 - - chromodomain protein, Y-like [Source:ZFIN;Acc:ZDB-GENE-070912-561]
20. zgc:162232 zgc:162232 251 1.718 0.793 0.925 - - - - - - -
21. gna14 ENSDARG00000035178 618 1.708 - 0.975 - - - - 0.733 - - guanine nucleotide binding protein (G protein), alpha 14 [Source:ZFIN;Acc:ZDB-GENE-040808-7]
22. gb:bc139653 gb:bc139653 239 1.691 - 0.836 - - - - 0.855 - -
23. si:dkey-27i16.3 si:dkey-27i16.3 494 1.691 0.712 0.979 - - - - - - -
24. cxxc1 cxxc1 914 1.681 0.770 0.911 - - - - - - -
25. fam43a ENSDARG00000043009 792 1.676 - 0.974 - - 0.702 - - - - family with sequence similarity 43, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6098]
26. tnip1 ENSDARG00000015653 94 1.675 0.845 - - - - - 0.830 - - TNFAIP3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1502]
27. C18H16orf70 C18H16orf70 542 1.674 - 0.949 - - 0.725 - - - -
28. CABZ01102038.1 ENSDARG00000116210 132 1.666 - - - 0.788 - - 0.878 - - growth arrest-specific 7b [Source:NCBI gene;Acc:100333627]
29. C20H6orf58_1 C20H6orf58_1 216 1.664 - 0.963 - - 0.701 - - - -
30. INHBE INHBE 95 1.656 - 0.917 - - - 0.739 - - -
31. l3mbtl1b ENSDARG00000074346 120 1.655 0.826 - - - - - 0.829 - - l(3)mbt-like 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-100922-38]
32. coro7 ENSDARG00000089616 2141 1.641 - 0.930 - - - - 0.711 - - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
33. si:dkey-117m1.3 si:dkey-117m1.3 154 1.638 0.804 - - - - - 0.834 - -
34. ube2g2 ENSDARG00000025404 1774 1.637 - 0.835 - 0.802 - - - - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
35. myo5b ENSDARG00000062003 653 1.636 - 0.817 - - - - 0.819 - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
36. lhx2b ENSDARG00000031222 517 1.635 - - - - - 0.761 0.874 - - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
37. crfb17 511 1.631 - 0.884 - - - - 0.747 - - cytokine receptor family member B17
38. snai1a ENSDARG00000056995 1427 1.63 - 0.881 - - - - 0.749 - - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
39. CR376848.1 ENSDARG00000115549 149 1.627 0.808 - - 0.819 - - - - - neutral cholesterol ester hydrolase 1-like [Source:NCBI gene;Acc:797436]
40. slc50a1 ENSDARG00000015158 329 1.624 - 0.916 - - - - 0.708 - - solute carrier family 50 (sugar efflux transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-050220-11]
41. FHOD3 FHOD3 422 1.612 - 0.816 - 0.796 - - - - -
42. mkl1b 1408 1.61 - - - 0.731 - - 0.879 - - megakaryoblastic leukemia (translocation) 1b, transcript variant X7
43. CABZ01067657.1 ENSDARG00000117241 245 1.597 - - - - - - 0.796 0.801 -
44. gnpat ENSDARG00000074401 479 1.592 0.790 - - 0.802 - - - - - glyceronephosphate O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-040618-4]
45. C10H21orf59 275 1.589 0.724 - - 0.865 - - - - - c10h21orf59 homolog (H. sapiens)
46. rcn3 ENSDARG00000037961, ENSDARG00000110075 1544 1.588 - 0.771 - - - - 0.817 - - reticulocalbin 3, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-040625-175]
47. FRMD4B FRMD4B 359 1.581 - - - 0.839 - 0.742 - - -
48. ano9a ENSDARG00000076320, ENSDARG00000078941 865 1.58 - 0.786 - - - - 0.794 - - anoctamin 9a [Source:ZFIN;Acc:ZDB-GENE-071004-46]
49. smim7 ENSDARG00000074848 1260 1.571 - 0.850 - 0.721 - - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
50. PROZ PROZ 288 1.564 - 0.813 - - - - 0.751 - -
51. rab33ba ENSDARG00000052290 914 1.564 - - - 0.806 - - 0.758 - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
52. mtmr7a ENSDARG00000037101, ENSDARG00000111336 161 1.552 0.718 - - 0.834 - - - - - myotubularin related protein 7a [Source:ZFIN;Acc:ZDB-GENE-060421-7754]
53. ptpn6 ENSDARG00000089043 168 1.541 - - - - 0.736 - 0.805 - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
54. vps39 ENSDARG00000074471 684 1.531 - 0.769 - - - - 0.762 - - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
55. fam199x ENSDARG00000009982 967 1.531 - 0.722 - - - 0.809 - - - family with sequence similarity 199, X-linked [Source:ZFIN;Acc:ZDB-GENE-040808-24]
56. magi2 magi2 301 1.523 0.764 - - - - 0.759 - - -
57. hoxa11a ENSDARG00000104162 283 1.521 0.787 - - 0.734 - - - - - homeobox A11a [Source:ZFIN;Acc:ZDB-GENE-000823-8]
58. ecm2 ENSDARG00000071549 1527 1.518 - - - 0.762 - - - 0.756 - extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
59. CABZ01088509.1 CABZ01088509.1 1213 1.516 0.805 - - - - 0.711 - - -
60. FOXO4 ENSDARG00000055792 1457 1.503 - 0.783 - - - 0.720 - - - forkhead box O4 [Source:ZFIN;Acc:ZDB-GENE-150311-1]
61. si:dkey-225f23.4 ENSDARG00000102520 86 1.498 - - 0.730 - 0.768 - - - - si:dkey-225f23.4 [Source:NCBI gene;Acc:100005326]
62. emx3 ENSDARG00000020417 85 1.494 - - - - - - 0.794 0.700 - empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
63. ZC3H12A_1 ZC3H12A_1 558 1.484 - 0.783 - - - - 0.701 - -
64. zgc:111983 ENSDARG00000006588 671 1.482 - 0.709 - - - - 0.773 - - zgc:111983 [Source:ZFIN;Acc:ZDB-GENE-050417-335]
65. chordc1 chordc1 548 1.476 - - - - - 0.736 - 0.740 -
66. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 1.474 0.759 - 0.715 - - - - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
67. tbc1d10a tbc1d10a 462 1.474 - - - - - 0.730 0.744 - -
68. mettl16 ENSDARG00000055838 818 1.465 0.757 - - 0.708 - - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
69. atp6v0b ENSDARG00000031681 4611 1.454 - - - - - 0.701 0.753 - - ATPase H+ transporting V0 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-443]
70. ngf ngf 278 1.448 0.725 - - - - - 0.723 - -
71. ddah2 ENSDARG00000105009 4570 1.442 - 0.722 - - - - - 0.720 - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
72. zgc:113100 zgc:113100 647 1.431 - - - - - 0.706 0.725 - -
73. he2 945 1.43 - 0.716 - - - - - 0.714 - hatching enzyme 2
74. C24H18orf8 C24H18orf8 87 1.429 0.723 - - - - - - 0.706 -
75. CEP152 ENSDARG00000075725 391 1.427 0.719 - - - - - 0.708 - - centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
76. NBL1 428 1.424 - - 0.709 - - - 0.715 - - neuroblastoma 1, DAN family BMP antagonist
77. skiv2l ENSDARG00000062206 268 0.99 - 0.990 - - - - - - - SKI2 homolog, superkiller viralicidic activity 2-like [Source:ZFIN;Acc:ZDB-GENE-010430-5]
78. olfml3b ENSDARG00000062171 264 0.99 - 0.990 - - - - - - - olfactomedin-like 3b [Source:ZFIN;Acc:ZDB-GENE-050302-161]
79. zgc:174275 ENSDARG00000099845 172 0.989 - 0.989 - - - - - - - zgc:174275 [Source:ZFIN;Acc:ZDB-GENE-080305-5]
80. LRIF1_1 LRIF1_1 228 0.988 - 0.988 - - - - - - -
81. pargl ENSDARG00000101719 155 0.988 - 0.988 - - - - - - - poly (ADP-ribose) glycohydrolase, like [Source:ZFIN;Acc:ZDB-GENE-090313-286]
82. epb41l4a ENSDARG00000040087 1013 0.986 - 0.986 - - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
83. il4r il4r 75 0.985 - 0.985 - - - - - - -
84. cnstb ENSDARG00000042759 105 0.984 - 0.984 - - - - - - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
85. ldb1a ENSDARG00000010137 3035 0.983 - 0.983 - - - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
86. ttc9c ENSDARG00000007025 463 0.983 - 0.983 - - - - - - - tetratricopeptide repeat domain 9C [Source:ZFIN;Acc:ZDB-GENE-040426-1053]
87. uroc1 ENSDARG00000070394 357 0.983 - 0.983 - - - - - - - urocanate hydratase 1 [Source:ZFIN;Acc:ZDB-GENE-081022-148]
88. bbs4 ENSDARG00000063522 247 0.983 - 0.983 - - - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
89. cry5 ENSDARG00000019498 90 0.982 - 0.982 - - - - - - - cryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
90. C18H15orf61 C18H15orf61 104 0.982 - 0.982 - - - - - - -
91. si:ch211-149b19.3 ENSDARG00000076011 306 0.982 - 0.982 - - - - - - - si:ch211-149b19.3 [Source:ZFIN;Acc:ZDB-GENE-110411-37]
92. C5H11orf1 C5H11orf1 78 0.982 - 0.982 - - - - - - -
93. pdk1 ENSDARG00000013128 526 0.982 - 0.982 - - - - - - - pyruvate dehydrogenase kinase, isozyme 1 [Source:ZFIN;Acc:ZDB-GENE-091204-402]
94. drd3 ENSDARG00000032131, ENSDARG00000110679 25 0.981 - 0.981 - - - - - - - dopamine receptor D3 [Source:ZFIN;Acc:ZDB-GENE-021119-1]
95. ch25h ENSDARG00000045190 35 0.981 - 0.981 - - - - - - - cholesterol 25-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-041212-81]
96. fbln5 ENSDARG00000039273 105 0.98 - 0.980 - - - - - - - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
97. si:ch211-191a16.2 ENSDARG00000095665 16 0.98 - 0.980 - - - - - - - si:ch211-191a16.2 [Source:ZFIN;Acc:ZDB-GENE-081028-45]
98. MSLNL MSLNL 41 0.98 - 0.980 - - - - - - -
99. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.98 - 0.980 - - - - - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
100. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 0.98 - 0.980 - - - - - - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]

There are 1413 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA