Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sema4e

Gene Name Gene ID Reads Annotation
sema4e ENSDARG00000052997 607 semaphorin 4e [Source:ZFIN;Acc:ZDB-GENE-990715-7]










Genes with expression patterns similar to sema4e

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sema4e ENSDARG00000052997 607 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 semaphorin 4e [Source:ZFIN;Acc:ZDB-GENE-990715-7]
2. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 2.269 - 0.705 - 0.838 - - 0.726 - - RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
3. cant1a ENSDARG00000012192 1324 1.91 0.988 - - 0.922 - - - - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
4. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.859 0.997 - - 0.862 - - - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
5. slc25a5 ENSDARG00000092553 626 1.825 0.995 - - 0.830 - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
6. esrp2 ENSDARG00000018814, ENSDARG00000115061 1198 1.821 0.997 - - - - 0.824 - - - epithelial splicing regulatory protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9824]
7. myo6a ENSDARG00000044016 847 1.811 0.996 - - 0.815 - - - - - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
8. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.792 0.992 0.800 - - - - - - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
9. NBR1 NBR1 752 1.786 - - - 0.874 - 0.912 - - -
10. atl3 ENSDARG00000004270 2806 1.763 0.989 - - 0.774 - - - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
11. MARK4 ENSDARG00000024966 3377 1.73 0.975 - - - - - 0.755 - - microtubule affinity regulating kinase 4 [Source:HGNC Symbol;Acc:HGNC:13538]
12. apip ENSDARG00000003132 1212 1.729 0.995 - - - - - 0.734 - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]
13. itm2ca ENSDARG00000043448 1265 1.721 0.997 - - 0.724 - - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
14. eef2a.1 ENSDARG00000042094 1781 1.716 0.995 - - - - 0.721 - - - eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
15. get4 ENSDARG00000024398 1818 1.715 0.990 - - - - 0.725 - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
16. chd2 ENSDARG00000060687 3832 1.713 0.964 - - 0.749 - - - - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
17. krcp ENSDARG00000040224 5961 1.71 0.959 - - - - 0.751 - - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
18. map9 ENSDARG00000037276, ENSDARG00000115648 581 1.662 - 0.778 - 0.884 - - - - - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
19. wdfy2 ENSDARG00000040453 406 1.64 - - - 0.893 - - 0.747 - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
20. rassf9 ENSDARG00000074721 448 1.62 - 0.733 - 0.887 - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
21. fdx1l 461 1.597 - 0.763 - - - - 0.834 - - ferredoxin 1-like
22. f10 ENSDARG00000088581 4968 1.59 0.886 - - 0.704 - - - - - coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]
23. nrg1 ENSDARG00000104314 1081 1.56 - 0.704 - 0.856 - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
24. riok1 ENSDARG00000016399 936 1.556 - 0.780 - 0.776 - - - - - RIO kinase 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1927]
25. SMIM4 ENSDARG00000089921, ENSDARG00000113338, ENSDARG00000114490 831 1.541 - 0.797 - 0.744 - - - - - small integral membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-170130-1]
26. pcdh10a ENSDARG00000099729 2214 1.525 - - - 0.781 - - 0.744 - - protocadherin 10a [Source:ZFIN;Acc:ZDB-GENE-020731-1]
27. SEMA6B_1 SEMA6B_1 430 1.517 - 0.710 - 0.807 - - - - -
28. psd3l ENSDARG00000104820 1201 1.473 - 0.755 - 0.718 - - - - - pleckstrin and Sec7 domain containing 3, like [Source:ZFIN;Acc:ZDB-GENE-030131-8195]
29. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 1.47 - - - 0.723 - - 0.747 - - carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
30. ret ENSDARG00000055305 700 1.444 - 0.712 - 0.732 - - - - - ret proto-oncogene receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-980526-307]
31. mmp2 ENSDARG00000017676 2347 1.433 - - - - - 0.709 0.724 - - matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123]
32. arl6ip6 ENSDARG00000071013 670 1.425 - - - - - 0.724 0.701 - - ADP-ribosylation factor-like 6 interacting protein 6 [Source:ZFIN;Acc:ZDB-GENE-070410-117]
33. si:ch73-367f21.4 ENSDARG00000071097 862 0.999 0.999 - - - - - - - - si:ch73-367f21.4 [Source:ZFIN;Acc:ZDB-GENE-120214-27]
34. phf12a ENSDARG00000074303 1025 0.998 0.998 - - - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
35. RNF214 RNF214 816 0.998 0.998 - - - - - - - -
36. atg4b ENSDARG00000052104 758 0.998 0.998 - - - - - - - - autophagy related 4B, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040917-3]
37. slc22a2 ENSDARG00000030530 313 0.998 0.998 - - - - - - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
38. gbx1 ENSDARG00000071418 871 0.998 0.998 - - - - - - - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
39. ino80db ENSDARG00000062226 504 0.998 0.998 - - - - - - - - INO80 complex subunit Db [Source:ZFIN;Acc:ZDB-GENE-070112-2072]
40. daam2 ENSDARG00000028393 226 0.998 0.998 - - - - - - - - dishevelled associated activator of morphogenesis 2 [Source:ZFIN;Acc:ZDB-GENE-070709-1]
41. lyz ENSDARG00000057789, ENSDARG00000109290, ENSDARG00000114098 5991 0.998 0.998 - - - - - - - - lysozyme [Source:ZFIN;Acc:ZDB-GENE-020515-2]
42. SUSD4 ENSDARG00000026335 195 0.998 0.998 - - - - - - - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
43. bbs5 ENSDARG00000039827 211 0.997 0.997 - - - - - - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
44. mta3 ENSDARG00000054903, ENSDARG00000113436 353 0.997 0.997 - - - - - - - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
45. fbxo45 ENSDARG00000071492, ENSDARG00000111553 732 0.997 0.997 - - - - - - - - F-box protein 45 [Source:ZFIN;Acc:ZDB-GENE-040426-1450]
46. hoxb7a ENSDARG00000056030 1212 0.997 0.997 - - - - - - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
47. BX682552.2 BX682552.2 1427 0.997 0.997 - - - - - - - -
48. tmem194a tmem194a 745 0.997 0.997 - - - - - - - -
49. rnf168 ENSDARG00000112483 594 0.997 0.997 - - - - - - - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
50. zyx ENSDARG00000075733 429 0.997 0.997 - - - - - - - - zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]
51. chst14 ENSDARG00000043011 345 0.997 0.997 - - - - - - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [Source:ZFIN;Acc:ZDB-GENE-040401-3]
52. whsc1 1701 0.997 0.997 - - - - - - - - Wolf-Hirschhorn syndrome candidate 1
53. mocs2 ENSDARG00000077202, ENSDARG00000114592, ENSDARG00000114882 942 0.997 0.997 - - - - - - - - molybdenum cofactor synthesis 2 [Source:ZFIN;Acc:ZDB-GENE-110411-53]
54. dcp1b ENSDARG00000045484 534 0.997 0.997 - - - - - - - - decapping mRNA 1B [Source:ZFIN;Acc:ZDB-GENE-040819-1]
55. tctex1d1 ENSDARG00000103545 409 0.997 0.997 - - - - - - - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
56. cpped1 ENSDARG00000031968, ENSDARG00000112438 693 0.996 0.996 - - - - - - - - calcineurin-like phosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-118]
57. nr2f1b ENSDARG00000017168 1487 0.996 0.996 - - - - - - - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
58. AL935029.1 AL935029.1 514 0.996 0.996 - - - - - - - -
59. gtpbp4 ENSDARG00000018961 5323 0.996 0.996 - - - - - - - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
60. sh3gl3b ENSDARG00000007302 573 0.996 0.996 - - - - - - - - SH3-domain GRB2-like 3b [Source:ZFIN;Acc:ZDB-GENE-040121-4]
61. ep300b ENSDARG00000061108 5173 0.996 0.996 - - - - - - - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
62. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 0.996 0.996 - - - - - - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
63. tarbp2 ENSDARG00000070471 1946 0.996 0.996 - - - - - - - - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
64. dhcr7 ENSDARG00000103226 673 0.996 0.996 - - - - - - - - 7-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-030912-9]
65. dnajc11 1939 0.996 0.996 - - - - - - - - DnaJ heat shock protein family (Hsp40) member C11
66. cbx3b ENSDARG00000092158 1976 0.996 0.996 - - - - - - - - chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]
67. ercc4 ENSDARG00000014161 2167 0.996 0.996 - - - - - - - - excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]
68. HDAC5 ENSDARG00000075139 1287 0.996 0.996 - - - - - - - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
69. pfkfb4l pfkfb4l 2539 0.996 0.996 - - - - - - - -
70. cylda ENSDARG00000060058 768 0.996 0.996 - - - - - - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
71. cep170a cep170a 652 0.996 0.996 - - - - - - - -
72. wdr3 ENSDARG00000011079 1403 0.996 0.996 - - - - - - - - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
73. bfsp2 ENSDARG00000011998 295 0.995 0.995 - - - - - - - - beaded filament structural protein 2, phakinin [Source:ZFIN;Acc:ZDB-GENE-041212-58]
74. scinla ENSDARG00000102415, ENSDARG00000117110 1996 0.995 0.995 - - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
75. ryr1a ENSDARG00000011422 2377 0.995 0.995 - - - - - - - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
76. ghitm 1443 0.995 0.995 - - - - - - - - growth hormone inducible transmembrane protein
77. ELMSAN1_1 ELMSAN1_1 1337 0.995 0.995 - - - - - - - -
78. vars ENSDARG00000044575 1367 0.995 0.995 - - - - - - - - valyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-010601-1]
79. taf6l ENSDARG00000079684 1408 0.994 0.994 - - - - - - - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
80. selt1b 1396 0.993 0.993 - - - - - - - - selenoprotein T, 1b
81. TMEM150A_2 TMEM150A_2 739 0.993 0.993 - - - - - - - -
82. aclya ENSDARG00000099079 2324 0.993 0.993 - - - - - - - - ATP citrate lyase a [Source:ZFIN;Acc:ZDB-GENE-031113-1]
83. crbn ENSDARG00000054250 673 0.993 0.993 - - - - - - - - cereblon [Source:ZFIN;Acc:ZDB-GENE-040822-43]
84. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 0.993 0.993 - - - - - - - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
85. wbscr16 wbscr16 791 0.993 0.993 - - - - - - - -
86. BX511021.1 ENSDARG00000073936 647 0.992 0.992 - - - - - - - - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
87. calub ENSDARG00000005115 1478 0.992 0.992 - - - - - - - - calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]
88. rims2a ENSDARG00000101606 1088 0.991 0.991 - - - - - - - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
89. CU571336.1 ENSDARG00000099892 2164 0.991 0.991 - - - - - - - -
90. sgk2b ENSDARG00000006598 1039 0.991 0.991 - - - - - - - - serum/glucocorticoid regulated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060929-44]
91. gpc1b ENSDARG00000090585 1393 0.991 0.991 - - - - - - - - glypican 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1306]
92. cgnl1 ENSDARG00000015805 856 0.991 0.991 - - - - - - - - cingulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-071009-2]
93. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 0.991 0.991 - - - - - - - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
94. epas1b ENSDARG00000057671, ENSDARG00000113561, ENSDARG00000115742 1306 0.991 0.991 - - - - - - - - endothelial PAS domain protein 1b [Source:ZFIN;Acc:ZDB-GENE-060607-11]
95. CABZ01079427.1 CABZ01079427.1 1682 0.991 0.991 - - - - - - - -
96. cilp ENSDARG00000053362 1429 0.99 0.990 - - - - - - - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
97. AL929007.1 AL929007.1 3649 0.99 0.990 - - - - - - - -
98. taf7 ENSDARG00000019572 1305 0.989 0.989 - - - - - - - - TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-020419-18]
99. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 0.989 0.989 - - - - - - - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
100. mgat1a ENSDARG00000012407 605 0.989 0.989 - - - - - - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a [Source:ZFIN;Acc:ZDB-GENE-040426-1515]

There are 812 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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