Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sema4ab

Gene Name Gene ID Reads Annotation
sema4ab ENSDARG00000062352 409 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]










Genes with expression patterns similar to sema4ab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sema4ab ENSDARG00000062352 409 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
2. CR678040.1 CR678040.1 117 1.908 - 0.925 - - - - - - 0.983
3. nrxn3b ENSDARG00000062693 192 1.904 - 0.925 - - - - - - 0.979 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
4. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 1.856 - 0.873 - - - - - - 0.983 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
5. gpr143 ENSDARG00000034572 559 1.834 - - - - - - 0.859 - 0.975 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
6. SLC36A4 ENSDARG00000039661 175 1.768 - 0.910 - - - - 0.858 - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
7. nol8 ENSDARG00000044143 425 1.762 - - - - - - 0.784 - 0.978 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
8. ror1 ENSDARG00000015176 378 1.745 - - - - - 0.766 - - 0.979 receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
9. cks2 ENSDARG00000071410, ENSDARG00000116198 966 1.74 - - - - - - 0.818 - 0.922 CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
10. slc2a1a ENSDARG00000001437, ENSDARG00000116129 1614 1.732 - 0.906 - - - - - - 0.826 solute carrier family 2 (facilitated glucose transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3158]
11. ube3d ENSDARG00000026178 244 1.728 0.748 - - - - - - - 0.980 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
12. CTIF ENSDARG00000090617 270 1.727 0.746 - - - - - - - 0.981 CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
13. smg6 ENSDARG00000100481 493 1.717 0.756 - - - - - - - 0.961 SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
14. pus7 ENSDARG00000031774 195 1.707 - - - - - 0.736 - - 0.971 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
15. TRIP10 TRIP10 1079 1.696 - - - - - - 0.750 - 0.946
16. cwc22 ENSDARG00000014008 2385 1.688 - - - - - - 0.818 - 0.870 CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
17. jph3 ENSDARG00000102204 175 1.687 - 0.702 - - - - - - 0.985 junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
18. CABZ01054405.1 CABZ01054405.1 115 1.682 - 0.702 - - - - - - 0.980
19. pif1 ENSDARG00000020289 216 1.678 - 0.702 - - - - - - 0.976 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
20. zgc:113348 ENSDARG00000103795 1351 1.661 - - - - - - - 0.702 0.959 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
21. gad2 ENSDARG00000015537 724 1.659 - 0.799 - - - - - - 0.860 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
22. nr2f6a ENSDARG00000003607 4779 1.637 - - - - - - 0.747 - 0.890 nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
23. adipor1a ENSDARG00000002912, ENSDARG00000113136 796 1.632 - - - - - 0.714 - - 0.918 adiponectin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-169]
24. HSBP1 HSBP1 158 1.61 - 0.740 - - - 0.870 - - -
25. cables2a ENSDARG00000076964 1330 1.6 - - - - - 0.730 - - 0.870 Cdk5 and Abl enzyme substrate 2a [Source:ZFIN;Acc:ZDB-GENE-091118-58]
26. FRG1 ENSDARG00000056504 1196 1.598 - - - - - - 0.710 - 0.888 FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
27. taf5 ENSDARG00000018325 1363 1.594 - - - - - 0.742 - - 0.852 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
28. cables2b ENSDARG00000017154 131 1.584 0.802 - - - - 0.782 - - - Cdk5 and Abl enzyme substrate 2b [Source:ZFIN;Acc:ZDB-GENE-090313-249]
29. xpr1 xpr1 840 1.578 - 0.748 - - - - - - 0.830
30. CHL1 CHL1 1553 1.56 - 0.733 - - - - - - 0.827
31. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.534 - 0.702 - - - - - - 0.832 immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
32. CU302376.1 CU302376.1 141 1.509 0.728 - 0.781 - - - - - -
33. rereb ENSDARG00000075670 136 1.508 - 0.702 - - - 0.806 - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
34. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1.507 - 0.757 - - - 0.750 - - - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
35. mmp11a ENSDARG00000026325 133 1.492 - - - - - 0.772 0.720 - - matrix metallopeptidase 11a [Source:ZFIN;Acc:ZDB-GENE-070817-3]
36. arl11l arl11l 31 1.491 - 0.702 - - - 0.789 - - -
37. sox12 ENSDARG00000025847 681 1.484 - 0.702 - - - - - - 0.782 SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
38. herc2 ENSDARG00000073841 486 1.469 - 0.766 - - - 0.703 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070718-6]
39. nrp1a ENSDARG00000102153 4154 1.461 - - - - - - 0.724 - 0.737 neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
40. rfc1 ENSDARG00000054799 1416 1.454 - 0.712 - - - - 0.742 - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
41. TBC1D24 ENSDARG00000069339 1300 1.445 - - - - - 0.706 0.739 - - TBC1 domain family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050809-65]
42. si:ch211-249c2.1 ENSDARG00000102941 49 1.441 - - 0.716 - - 0.725 - - - si:ch211-249c2.1 [Source:ZFIN;Acc:ZDB-GENE-060503-317]
43. CR388095.2 ENSDARG00000117604 76 1.428 - 0.702 - - - 0.726 - - -
44. zgc:195195 zgc:195195 6 1.413 - 0.702 0.711 - - - - - -
45. si:ch211-13k12.1 si:ch211-13k12.1 25 1.404 - 0.702 0.702 - - - - - -
46. tada2b ENSDARG00000003769 507 1.403 0.702 - - - - - - 0.701 - transcriptional adaptor 2B [Source:ZFIN;Acc:ZDB-GENE-050522-557]
47. rxrgb ENSDARG00000004697 332 0.986 - - - - - - - - 0.986 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
48. SNAP91 ENSDARG00000098809 556 0.986 - - - - - - - - 0.986 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
49. TUBB8P7_2 TUBB8P7_2 565 0.983 - - - - - - - - 0.983
50. rab11fip3 ENSDARG00000016490 661 0.983 - - - - - - - - 0.983 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
51. zgc:173480 171 0.983 - - - - - - - - 0.983 zgc:173480
52. flrt1a 107 0.983 - - - - - - - - 0.983 fibronectin leucine rich transmembrane protein 1a, transcript variant X2
53. dkk3b ENSDARG00000070683 209 0.983 - - - - - - - - 0.983 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
54. rnf121 ENSDARG00000060282 1809 0.982 - - - - - - - - 0.982 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
55. PRDM12 PRDM12 133 0.982 - - - - - - - - 0.982
56. CEP152 ENSDARG00000075725 391 0.982 - - - - - - - - 0.982 centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
57. AL929322.1 AL929322.1 300 0.982 - - - - - - - - 0.982
58. st8sia5 ENSDARG00000036584 529 0.982 - - - - - - - - 0.982 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
59. abcg1 ENSDARG00000063475 97 0.982 - - - - - - - - 0.982 ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
60. prmt6 ENSDARG00000069706 484 0.982 - - - - - - - - 0.982 protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
61. TAF2 ENSDARG00000102307 1401 0.982 - - - - - - - - 0.982 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
62. slc6a6a ENSDARG00000012534 183 0.982 - - - - - - - - 0.982 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
63. nupl2 ENSDARG00000029043 105 0.981 - - - - - - - - 0.981 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
64. AKAP12 AKAP12 140 0.981 - - - - - - - - 0.981
65. si:dkey-156k2.6 si:dkey-156k2.6 848 0.981 - - - - - - - - 0.981
66. ttc21b ENSDARG00000012368 229 0.981 - - - - - - - - 0.981 tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
67. ltc4s ENSDARG00000062598 138 0.981 - - - - - - - - 0.981 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
68. hprt1l ENSDARG00000014866 696 0.981 - - - - - - - - 0.981 hypoxanthine phosphoribosyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040625-17]
69. naa25 ENSDARG00000075446 1505 0.981 - - - - - - - - 0.981 N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:ZFIN;Acc:ZDB-GENE-041111-190]
70. ZNFX1 ENSDARG00000100280 118 0.981 - - - - - - - - 0.981 zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
71. ncam2 ENSDARG00000017466 175 0.981 - - - - - - - - 0.981 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
72. dopey1 438 0.981 - - - - - - - - 0.981 dopey family member 1, transcript variant X4
73. oraov1 497 0.98 - - - - - - - - 0.980 oral cancer overexpressed 1
74. hdac10 ENSDARG00000086458 676 0.98 - - - - - - - - 0.980 histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
75. KLF8 ENSDARG00000060661 219 0.98 - - - - - - - - 0.980 Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
76. ptprk ENSDARG00000063416 742 0.98 - - - - - - - - 0.980 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
77. slc25a43 ENSDARG00000102048 489 0.98 - - - - - - - - 0.980 solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
78. ZNF337_4 ZNF337_4 409 0.98 - - - - - - - - 0.980
79. vcp ENSDARG00000020008, ENSDARG00000116074 2284 0.98 - - - - - - - - 0.980 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
80. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 0.98 - - - - - - - - 0.980 wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
81. DDX47_1 DDX47_1 453 0.979 - - - - - - - - 0.979
82. ptn ENSDARG00000102340 229 0.979 - - - - - - - - 0.979 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
83. cenpk ENSDARG00000039616 744 0.979 - - - - - - - - 0.979 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
84. nsun2 ENSDARG00000056665 740 0.979 - - - - - - - - 0.979 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
85. dvl1b ENSDARG00000055552 146 0.979 - - - - - - - - 0.979 dishevelled segment polarity protein 1b [Source:ZFIN;Acc:ZDB-GENE-071004-1]
86. CENPF ENSDARG00000055133 436 0.978 - - - - - - - - 0.978 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
87. thsd7ba ENSDARG00000095022 231 0.978 - - - - - - - - 0.978 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
88. ZFAT ENSDARG00000077987 205 0.977 - - - - - - - - 0.977 zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
89. si:dkey-114c15.7 237 0.977 - - - - - - - - 0.977 si:dkey-114c15.7
90. rac3a ENSDARG00000090062 394 0.977 - - - - - - - - 0.977 Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
91. NHS NHS 409 0.977 - - - - - - - - 0.977
92. tspan5b ENSDARG00000070449 1056 0.977 - - - - - - - - 0.977 tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
93. umps ENSDARG00000012215 4564 0.977 - - - - - - - - 0.977 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
94. si:ch211-133l11.10 ENSDARG00000005626 381 0.976 - - - - - - - - 0.976 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
95. CR376785.2 CR376785.2 175 0.975 - - - - - - - - 0.975
96. ndst2b ENSDARG00000060678 453 0.975 - - - - - - - - 0.975 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
97. lsm1 ENSDARG00000043177 767 0.975 - - - - - - - - 0.975 LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
98. RABEPK ENSDARG00000112165 112 0.975 - - - - - - - - 0.975 Rab9 effector protein with kelch motifs [Source:ZFIN;Acc:ZDB-GENE-040704-52]
99. rbm45 ENSDARG00000063731 504 0.975 - - - - - - - - 0.975 RNA binding motif protein 45 [Source:ZFIN;Acc:ZDB-GENE-070122-4]
100. HDX ENSDARG00000079382 513 0.975 - - - - - - - - 0.975 highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]

There are 1463 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA