Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sema3ga

Gene Name Gene ID Reads Annotation
sema3ga ENSDARG00000042545 1603 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga [Source:ZFIN;Acc:ZDB-GENE-050513-3]










Genes with expression patterns similar to sema3ga

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sema3ga ENSDARG00000042545 1603 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga [Source:ZFIN;Acc:ZDB-GENE-050513-3]
2. cxcr7b cxcr7b 2482 1.813 - - - - - - 0.815 - 0.998
3. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 1.742 - - - - - 0.743 - - 0.999 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
4. hhipl1 ENSDARG00000062501 210 1.728 - 0.849 - 0.879 - - - - - HHIP-like 1 [Source:ZFIN;Acc:ZDB-GENE-090306-3]
5. s100z ENSDARG00000038729 442 1.688 - 0.817 - 0.871 - - - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
6. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 1.678 - - - - - - 0.703 - 0.975 Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
7. rtkn2 rtkn2 1092 1.673 - 0.895 - 0.778 - - - - -
8. arpc2 ENSDARG00000075989 22423 1.672 - - - - - - 0.725 - 0.947 actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
9. si:ch73-74h11.1 ENSDARG00000062750 158 1.646 - 0.795 - - - - 0.851 - - si:ch73-74h11.1 [Source:ZFIN;Acc:ZDB-GENE-091204-215]
10. cog2 ENSDARG00000004037 462 1.645 - - - 0.864 - 0.781 - - - component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
11. C19H1orf51 C19H1orf51 1776 1.639 - 0.874 - 0.765 - - - - -
12. josd2 ENSDARG00000057626, ENSDARG00000111978 273 1.632 - 0.800 - - - 0.832 - - - Josephin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-850]
13. upb1 ENSDARG00000011521, ENSDARG00000116790 920 1.626 - 0.780 - - - - 0.846 - - ureidopropionase, beta [Source:ZFIN;Acc:ZDB-GENE-030131-1380]
14. si:dkey-150k17.2 si:dkey-150k17.2 40 1.612 - 0.846 - - - 0.766 - - -
15. foxa3 ENSDARG00000012788 405 1.608 - 0.848 - - - 0.760 - - - forkhead box A3 [Source:ZFIN;Acc:ZDB-GENE-980526-423]
16. CFP ENSDARG00000094451 852 1.604 - - - 0.748 - - 0.856 - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
17. gmfb ENSDARG00000028327 6522 1.603 - 0.716 - - - - - - 0.887 glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
18. ap1g2 ENSDARG00000054337, ENSDARG00000116382 374 1.6 - - - 0.800 - - 0.800 - - adaptor related protein complex 1 subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030616-587]
19. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.592 - - - 0.835 - - 0.757 - - hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
20. hey1 ENSDARG00000070538 986 1.59 - 0.711 - - - - 0.879 - - hes-related family bHLH transcription factor with YRPW motif 1 [Source:ZFIN;Acc:ZDB-GENE-000607-70]
21. acap1 ENSDARG00000056346, ENSDARG00000109603 274 1.588 - 0.872 - - - - 0.716 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1242]
22. zgc:153924 507 1.585 - - - 0.801 - - 0.784 - - zgc:153924
23. tusc2b ENSDARG00000025340 2391 1.584 - - - 0.750 - - 0.834 - - tumor suppressor 2, mitochondrial calcium regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-99]
24. twf1b ENSDARG00000011661 630 1.582 - 0.853 - - - - 0.729 - - twinfilin actin-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040711-3]
25. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.574 - - - 0.717 - - 0.857 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
26. ccrl1a ccrl1a 40 1.573 - 0.846 - - - - 0.727 - -
27. tnfaip8l3 ENSDARG00000088709 345 1.569 - 0.777 - 0.792 - - - - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
28. gltpd1 gltpd1 377 1.562 - - - 0.840 - - 0.722 - -
29. CABZ01084613.1 CABZ01084613.1 22 1.561 - 0.848 - - - 0.713 - - -
30. si:dkey-95p16.2 ENSDARG00000093484 3413 1.556 - - - 0.799 - - 0.757 - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
31. rpl37_1 ENSDARG00000034291, ENSDARG00000076360 365 1.556 - 0.768 - 0.788 - - - - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
32. zc3h7b 2936 1.55 - 0.843 - - - - 0.707 - - zinc finger CCCH-type containing 7B
33. dlx2b ENSDARG00000017174, ENSDARG00000116017 580 1.545 - - - 0.817 - - 0.728 - - distal-less homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-18]
34. ihha ENSDARG00000058733 241 1.539 - 0.811 - - - 0.728 - - - Indian hedgehog homolog a [Source:ZFIN;Acc:ZDB-GENE-051010-1]
35. ulk4 ENSDARG00000004176 85 1.537 - 0.836 - - - - 0.701 - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
36. nt5c1bb ENSDARG00000033742 1248 1.537 - 0.831 - - - - 0.706 - - 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
37. kremen1 ENSDARG00000062579 190 1.534 - - - - - 0.818 0.716 - - kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
38. si:ch211-218d20.13 si:ch211-218d20.13 5488 1.531 - 0.703 - - - - - - 0.828
39. rfx1b ENSDARG00000075904 1175 1.529 - - - 0.801 - - 0.728 - - regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
40. col4a4 ENSDARG00000002831 803 1.528 - - - 0.817 - - 0.711 - - collagen, type IV, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-101001-1]
41. hsdl1 ENSDARG00000041736 171 1.527 - 0.799 - - - - 0.728 - - hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]
42. inadl 80 1.525 - 0.820 - - - - 0.705 - - InaD-like (Drosophila), transcript variant X4
43. selk 954 1.525 - - - 0.785 - 0.740 - - - selenoprotein K
44. cldne ENSDARG00000043128 6960 1.525 - 0.770 - - - - 0.755 - - claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
45. notum1a ENSDARG00000031126 825 1.524 - 0.753 - 0.771 - - - - - notum, palmitoleoyl-protein carboxylesterase a [Source:ZFIN;Acc:ZDB-GENE-120807-2]
46. st3gal3b ENSDARG00000015252 465 1.515 - 0.790 - - - - 0.725 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-050411-13]
47. ELMSAN1_1 ELMSAN1_1 1337 1.513 - - - - - 0.748 0.765 - -
48. galnt10 ENSDARG00000103825 320 1.513 - - - 0.703 - - 0.810 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) [Source:ZFIN;Acc:ZDB-GENE-030131-595]
49. CENPF ENSDARG00000055133 436 1.508 - 0.721 - - - - 0.787 - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
50. kcnh6 kcnh6 59 1.507 - 0.792 - - - - 0.715 - -
51. arl9 ENSDARG00000071881 403 1.496 - 0.752 - - - 0.744 - - - ADP-ribosylation factor-like 9 [Source:ZFIN;Acc:ZDB-GENE-060825-210]
52. ntn2 ENSDARG00000076748 368 1.493 - - - 0.771 - 0.722 - - - netrin 2 [Source:ZFIN;Acc:ZDB-GENE-050310-2]
53. arl4cb ENSDARG00000032708, ENSDARG00000110274 2769 1.49 - 0.729 - 0.761 - - - - - ADP-ribosylation factor-like 4Cb [Source:ZFIN;Acc:ZDB-GENE-040426-2382]
54. cenpj ENSDARG00000018121, ENSDARG00000113752 398 1.489 - - - 0.784 - 0.705 - - - centromere protein J [Source:ZFIN;Acc:ZDB-GENE-030131-6323]
55. SUOX ENSDARG00000091574 122 1.486 - 0.760 - - - - 0.726 - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
56. muc13a ENSDARG00000069559 985 1.484 - 0.783 - - - 0.701 - - - mucin 13a, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-061207-26]
57. ryroxd1 227 1.483 - 0.764 - - - - 0.719 - - pyridine nucleotide-disulphide oxidoreductase domain 1, transcript variant X1
58. lrrc8db ENSDARG00000103840 606 1.469 - 0.706 - - - 0.763 - - - leucine rich repeat containing 8 VRAC subunit Db [Source:ZFIN;Acc:ZDB-GENE-061013-487]
59. swap70a ENSDARG00000051819 115 1.467 - 0.706 - - - - 0.761 - - switching B cell complex subunit SWAP70a [Source:ZFIN;Acc:ZDB-GENE-040426-1182]
60. smcr8a ENSDARG00000052818 559 1.459 - 0.711 - - - - 0.748 - - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
61. dennd6b ENSDARG00000011605 412 1.459 - - - 0.755 - 0.704 - - - DENN/MADD domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-030131-9382]
62. CABZ01073405.1 CABZ01073405.1 275 1.455 - 0.746 - - - - 0.709 - -
63. mycbp ENSDARG00000091001 1511 1.45 - 0.727 - - - 0.723 - - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
64. si:ch211-67e16.4 ENSDARG00000086317 609 1.444 - 0.702 - 0.742 - - - - - si:ch211-67e16.4 [Source:ZFIN;Acc:ZDB-GENE-070912-311]
65. si:ch211-135f11.1 166 1.441 - - - - - 0.731 0.710 - - si:ch211-135f11.1, transcript variant X3
66. trpm4 trpm4 501 1.435 - - - - - 0.731 0.704 - -
67. OVOL1 75 1.421 - 0.712 - 0.709 - - - - - ovo-like zinc finger 1, transcript variant X1
68. atp13a atp13a 2867 1 - - - - - - - - 1.000
69. C13H9orf72 C13H9orf72 2310 1 - - - - - - - - 1.000
70. dcaf15 ENSDARG00000077790 1039 1 - - - - - - - - 1.000 DDB1 and CUL4 associated factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-2374]
71. BAD BAD 1322 1 - - - - - - - - 1.000
72. inpp5f ENSDARG00000061437 1228 1 - - - - - - - - 1.000 inositol polyphosphate-5-phosphatase F [Source:ZFIN;Acc:ZDB-GENE-041111-194]
73. tfec ENSDARG00000098745 1399 1 - - - - - - - - 1.000 transcription factor EC [Source:ZFIN;Acc:ZDB-GENE-041210-21]
74. fopnl ENSDARG00000071198 1002 1 - - - - - - - - 1.000 fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
75. galnt13 ENSDARG00000099227 1059 1 - - - - - - - - 1.000 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
76. opa1_1 ENSDARG00000070801 1424 1 - - - - - - - - 1.000 optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
77. hnrnpua ENSDARG00000015206 4012 0.999 - - - - - - - - 0.999 heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
78. tfam ENSDARG00000063145 4524 0.999 - - - - - - - - 0.999 transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
79. zc3h15 ENSDARG00000015889 3861 0.999 - - - - - - - - 0.999 zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
80. tpd52l2a ENSDARG00000027154 4359 0.999 - - - - - - - - 0.999 tumor protein D52-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7047]
81. acin1b ENSDARG00000026842 3806 0.999 - - - - - - - - 0.999 apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
82. foxa2 ENSDARG00000003411 2309 0.999 - - - - - - - - 0.999 forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
83. fdx1 ENSDARG00000056410, ENSDARG00000115831 3463 0.999 - - - - - - - - 0.999 ferredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-071015-2]
84. pck2 ENSDARG00000020956, ENSDARG00000110463 4713 0.999 - - - - - - - - 0.999 phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]
85. flot2b ENSDARG00000069774 2831 0.999 - - - - - - - - 0.999 flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
86. pknox1.2 ENSDARG00000036542 1503 0.999 - - - - - - - - 0.999 pbx/knotted 1 homeobox 1.2 [Source:ZFIN;Acc:ZDB-GENE-020123-1]
87. mrps33 ENSDARG00000020015 3551 0.999 - - - - - - - - 0.999 mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
88. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 0.999 - - - - - - - - 0.999 proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
89. sorbs1 ENSDARG00000103435 2297 0.999 - - - - - - - - 0.999 sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
90. zbtb5 1484 0.999 - - - - - - - - 0.999 zinc finger and BTB domain containing 5
91. stx2b ENSDARG00000068217 2567 0.999 - - - - - - - - 0.999 syntaxin 2b [Source:ZFIN;Acc:ZDB-GENE-091204-424]
92. sec63 ENSDARG00000017740 3789 0.999 - - - - - - - - 0.999 SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
93. dhx8 ENSDARG00000054707 2088 0.999 - - - - - - - - 0.999 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-050809-39]
94. fam135a ENSDARG00000059843 2352 0.999 - - - - - - - - 0.999 family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
95. pura pura 1854 0.998 - - - - - - - - 0.998
96. rbmx2 ENSDARG00000044380, ENSDARG00000115698 2528 0.998 - - - - - - - - 0.998 RNA binding motif protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-050626-88]
97. nnt ENSDARG00000023536 7357 0.997 - - - - - - - - 0.997 nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
98. gng3 ENSDARG00000009553 2530 0.997 - - - - - - - - 0.997 guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
99. rab5c ENSDARG00000026712 4733 0.996 - - - - - - - - 0.996 RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
100. sltm ENSDARG00000052728 6234 0.996 - - - - - - - - 0.996 SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]

There are 1476 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA